data_1MTB # _model_server_result.job_id 1JeQ4zOgyoESX4cAhb2UoQ _model_server_result.datetime_utc '2025-01-09 13:51:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1mtb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":100}' # _entry.id 1MTB # _exptl.entry_id 1MTB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 670.841 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-N-[(2S,3R)-4-[(2S,3S,4aS,8aS)-3-(tert-butylcarbamoyl)-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-2-yl]-3-hydroxy-1 -phenyl-butan-2-yl]-2-(quinolin-2-ylcarbonylamino)butanediamide' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1MTB _cell.length_a 51.439 _cell.length_b 60.039 _cell.length_c 62.021 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1MTB _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C38 H50 N6 O5' _chem_comp.formula_weight 670.841 _chem_comp.id ROC _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-N-[(2S,3R)-4-[(2S,3S,4aS,8aS)-3-(tert-butylcarbamoyl)-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-2-yl]-3-hydroxy-1 -phenyl-butan-2-yl]-2-(quinolin-2-ylcarbonylamino)butanediamide' _chem_comp.type peptide-like _chem_comp.pdbx_synonyms 'Fortovase;SAQUINAVIR;RO 31-8959' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O C ROC doub 277 n n C C2 ROC sing 278 n n N1 C2 ROC doub 279 n y N1 C8A ROC sing 280 n y C2 C3 ROC sing 281 n y C3 C4 ROC doub 282 n y C3 H3 ROC sing 283 n n C4 C4A ROC sing 284 n y C4 H4 ROC sing 285 n n C4A C5 ROC doub 286 n y C4A C8A ROC sing 287 n y C5 C6 ROC sing 288 n y C5 H5 ROC sing 289 n n C6 C7 ROC doub 290 n y C6 H6 ROC sing 291 n n C7 C8 ROC sing 292 n y C7 H7 ROC sing 293 n n C8 C8A ROC doub 294 n y C8 H8 ROC sing 295 n n N CA ROC sing 296 n n N H ROC sing 297 n n CA C1 ROC sing 298 n n CA CB ROC sing 299 n n CA HA ROC sing 300 n n C1 O1 ROC doub 301 n n CB CG ROC sing 302 n n CB HB2 ROC sing 303 n n CB HB3 ROC sing 304 n n CG OD1 ROC doub 305 n n CG ND2 ROC sing 306 n n ND2 HD21 ROC sing 307 n n ND2 HD22 ROC sing 308 n n C9 O2 ROC sing 309 n n C9 CA1 ROC sing 310 n n C9 HC ROC sing 311 n n O2 HO ROC sing 312 n n CA1 N2 ROC sing 313 n n CA1 CB1 ROC sing 314 n n CA1 HA1 ROC sing 315 n n N2 H1 ROC sing 316 n n CB1 CG1 ROC sing 317 n n CB1 HB21 ROC sing 318 n n CB1 HB31 ROC sing 319 n n CG1 CD1 ROC doub 320 n y CG1 CD2 ROC sing 321 n y CD1 CE1 ROC sing 322 n y CD1 HD1 ROC sing 323 n n CD2 CE2 ROC doub 324 n y CD2 HD2 ROC sing 325 n n CE1 CZ ROC doub 326 n y CE1 HE1 ROC sing 327 n n CE2 CZ ROC sing 328 n y CE2 HE2 ROC sing 329 n n CZ HZ ROC sing 330 n n N11 CM ROC sing 331 n n N11 C21 ROC sing 332 n n N11 C81 ROC sing 333 n n CM HM1 ROC sing 334 n n CM HM2 ROC sing 335 n n C21 CC ROC sing 336 n n C21 C31 ROC sing 337 n n C21 H2 ROC sing 338 n n CC O3 ROC doub 339 n n C31 C3A ROC sing 340 n n C31 H31 ROC sing 341 n n C31 H32 ROC sing 342 n n C3A C41 ROC sing 343 n n C3A C7A ROC sing 344 n n C3A H3A ROC sing 345 n n C41 C51 ROC sing 346 n n C41 H41 ROC sing 347 n n C41 H42 ROC sing 348 n n C51 C61 ROC sing 349 n n C51 H51 ROC sing 350 n n C51 H52 ROC sing 351 n n C61 C71 ROC sing 352 n n C61 H61 ROC sing 353 n n C61 H62 ROC sing 354 n n C71 C7A ROC sing 355 n n C71 H71 ROC sing 356 n n C71 H72 ROC sing 357 n n C7A C81 ROC sing 358 n n C7A H7A ROC sing 359 n n C81 H81 ROC sing 360 n n C81 H82 ROC sing 361 n n N3 CD ROC sing 362 n n N3 HN1 ROC sing 363 n n CD C11 ROC sing 364 n n CD C22 ROC sing 365 n n CD C32 ROC sing 366 n n C11 H11 ROC sing 367 n n C11 H12 ROC sing 368 n n C11 H13 ROC sing 369 n n C22 H21 ROC sing 370 n n C22 H22 ROC sing 371 n n C22 H23 ROC sing 372 n n C32 H311 ROC sing 373 n n C32 H321 ROC sing 374 n n C32 H33 ROC sing 375 n n C N ROC sing 376 n n C1 N2 ROC sing 377 n n C9 CM ROC sing 378 n n CC N3 ROC sing 379 n n # _atom_sites.entry_id 1MTB _atom_sites.fract_transf_matrix[1][1] 0.019441 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016656 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016124 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ROC A 1 100 1 ROC QNC . D 3 HOH A 1 103 1 HOH HOH . D 3 HOH A 2 104 5 HOH HOH . D 3 HOH A 3 105 7 HOH HOH . D 3 HOH A 4 106 11 HOH HOH . D 3 HOH A 5 107 15 HOH HOH . D 3 HOH A 6 108 20 HOH HOH . D 3 HOH A 7 109 22 HOH HOH . D 3 HOH A 8 110 24 HOH HOH . D 3 HOH A 9 111 25 HOH HOH . D 3 HOH A 10 112 27 HOH HOH . D 3 HOH A 11 113 28 HOH HOH . D 3 HOH A 12 114 30 HOH HOH . D 3 HOH A 13 115 32 HOH HOH . D 3 HOH A 14 116 33 HOH HOH . D 3 HOH A 15 117 34 HOH HOH . D 3 HOH A 16 118 35 HOH HOH . D 3 HOH A 17 119 36 HOH HOH . D 3 HOH A 18 120 37 HOH HOH . D 3 HOH A 19 121 51 HOH HOH . E 3 HOH B 1 102 2 HOH HOH . E 3 HOH B 2 103 4 HOH HOH . E 3 HOH B 3 104 6 HOH HOH . E 3 HOH B 4 105 8 HOH HOH . E 3 HOH B 5 106 9 HOH HOH . E 3 HOH B 6 107 10 HOH HOH . E 3 HOH B 7 108 12 HOH HOH . E 3 HOH B 8 109 13 HOH HOH . E 3 HOH B 9 110 14 HOH HOH . E 3 HOH B 10 111 16 HOH HOH . E 3 HOH B 11 112 17 HOH HOH . E 3 HOH B 12 113 18 HOH HOH . E 3 HOH B 13 114 19 HOH HOH . E 3 HOH B 14 115 21 HOH HOH . E 3 HOH B 15 116 23 HOH HOH . E 3 HOH B 16 117 26 HOH HOH . E 3 HOH B 17 118 29 HOH HOH . E 3 HOH B 18 119 31 HOH HOH . E 3 HOH B 19 120 38 HOH HOH . E 3 HOH B 20 121 39 HOH HOH . E 3 HOH B 21 122 40 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ROC . . . C 2 6.118 -6.202 17.829 1 62.57 ? C ROC 100 A 1 HETATM 2 O O ROC . . . C 2 6.27 -5.436 18.802 1 63.08 ? O ROC 100 A 1 HETATM 3 N N1 ROC . . . C 2 5.287 -8.154 16.71 1 64.52 ? N1 ROC 100 A 1 HETATM 4 C C2 ROC . . . C 2 5.37 -7.399 17.875 1 64.25 ? C2 ROC 100 A 1 HETATM 5 C C3 ROC . . . C 2 4.689 -7.856 19.053 1 64.66 ? C3 ROC 100 A 1 HETATM 6 C C4 ROC . . . C 2 3.949 -9.068 18.997 1 65.93 ? C4 ROC 100 A 1 HETATM 7 C C5 ROC . . . C 2 3.153 -11.026 17.693 1 66.93 ? C5 ROC 100 A 1 HETATM 8 C C6 ROC . . . C 2 3.125 -11.731 16.446 1 65.88 ? C6 ROC 100 A 1 HETATM 9 C C7 ROC . . . C 2 3.821 -11.234 15.3 1 64.16 ? C7 ROC 100 A 1 HETATM 10 C C8 ROC . . . C 2 4.556 -10.024 15.378 1 64.55 ? C8 ROC 100 A 1 HETATM 11 C C4A ROC . . . C 2 3.889 -9.81 17.781 1 66.87 ? C4A ROC 100 A 1 HETATM 12 C C8A ROC . . . C 2 4.591 -9.319 16.609 1 65.83 ? C8A ROC 100 A 1 HETATM 13 N N ROC . . . C 2 6.673 -5.862 16.649 1 59.89 ? N ROC 100 A 1 HETATM 14 C CA ROC . . . C 2 7.434 -4.628 16.504 1 56.24 ? CA ROC 100 A 1 HETATM 15 C C1 ROC . . . C 2 6.589 -3.687 15.659 1 53.97 ? C1 ROC 100 A 1 HETATM 16 O O1 ROC . . . C 2 6.581 -3.734 14.426 1 50.91 ? O1 ROC 100 A 1 HETATM 17 C CB ROC . . . C 2 8.787 -4.891 15.832 1 56.94 ? CB ROC 100 A 1 HETATM 18 C CG ROC . . . C 2 9.762 -5.616 16.747 1 59.15 ? CG ROC 100 A 1 HETATM 19 O OD1 ROC . . . C 2 10.149 -5.099 17.796 1 58.74 ? OD1 ROC 100 A 1 HETATM 20 N ND2 ROC . . . C 2 10.162 -6.822 16.351 1 60.89 ? ND2 ROC 100 A 1 HETATM 21 C C9 ROC . . . C 2 5.523 -0.459 15.931 1 49.83 ? C9 ROC 100 A 1 HETATM 22 O O2 ROC . . . C 2 5.185 -0.104 17.264 1 51.29 ? O2 ROC 100 A 1 HETATM 23 C CA1 ROC . . . C 2 4.974 -1.887 15.645 1 51.22 ? CA1 ROC 100 A 1 HETATM 24 N N2 ROC . . . C 2 5.84 -2.824 16.341 1 52.48 ? N2 ROC 100 A 1 HETATM 25 C CB1 ROC . . . C 2 3.519 -2.103 16.161 1 50.6 ? CB1 ROC 100 A 1 HETATM 26 C CG1 ROC . . . C 2 3.06 -3.552 16.185 1 47.8 ? CG1 ROC 100 A 1 HETATM 27 C CD1 ROC . . . C 2 2.989 -4.29 15.008 1 47.36 ? CD1 ROC 100 A 1 HETATM 28 C CD2 ROC . . . C 2 2.678 -4.107 17.404 1 48.5 ? CD2 ROC 100 A 1 HETATM 29 C CE1 ROC . . . C 2 2.529 -5.599 15.06 1 47.58 ? CE1 ROC 100 A 1 HETATM 30 C CE2 ROC . . . C 2 2.222 -5.407 17.438 1 47 ? CE2 ROC 100 A 1 HETATM 31 C CZ ROC . . . C 2 2.145 -6.152 16.269 1 47.5 ? CZ ROC 100 A 1 HETATM 32 N N11 ROC . . . C 2 5.779 0.61 13.711 1 46.53 ? N11 ROC 100 A 1 HETATM 33 C CM ROC . . . C 2 5.091 0.661 14.996 1 46.15 ? CM ROC 100 A 1 HETATM 34 C C21 ROC . . . C 2 4.967 1.212 12.596 1 46.02 ? C21 ROC 100 A 1 HETATM 35 C CC ROC . . . C 2 3.631 0.544 12.318 1 44.37 ? CC ROC 100 A 1 HETATM 36 O O3 ROC . . . C 2 3.564 -0.685 12.377 1 43.98 ? O3 ROC 100 A 1 HETATM 37 C C31 ROC . . . C 2 5.744 1.18 11.266 1 48.3 ? C31 ROC 100 A 1 HETATM 38 C C3A ROC . . . C 2 7.104 1.885 11.435 1 46.33 ? C3A ROC 100 A 1 HETATM 39 C C41 ROC . . . C 2 7.912 1.85 10.147 1 45.11 ? C41 ROC 100 A 1 HETATM 40 C C51 ROC . . . C 2 8.511 0.456 9.866 1 45.94 ? C51 ROC 100 A 1 HETATM 41 C C61 ROC . . . C 2 9.38 -0.06 11.034 1 47.5 ? C61 ROC 100 A 1 HETATM 42 C C71 ROC . . . C 2 8.513 -0.118 12.306 1 44.81 ? C71 ROC 100 A 1 HETATM 43 C C7A ROC . . . C 2 7.958 1.281 12.636 1 44.86 ? C7A ROC 100 A 1 HETATM 44 C C81 ROC . . . C 2 7.085 1.288 13.902 1 45.51 ? C81 ROC 100 A 1 HETATM 45 N N3 ROC . . . C 2 2.765 1.396 11.726 1 43.92 ? N3 ROC 100 A 1 HETATM 46 C CD ROC . . . C 2 1.366 1.168 11.366 1 44.04 ? CD ROC 100 A 1 HETATM 47 C C11 ROC . . . C 2 0.768 2.55 11.178 1 42.11 ? C11 ROC 100 A 1 HETATM 48 C C22 ROC . . . C 2 1.243 0.446 10.05 1 45.18 ? C22 ROC 100 A 1 HETATM 49 C C32 ROC . . . C 2 0.573 0.444 12.466 1 45.23 ? C32 ROC 100 A 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 49 #