data_1MV5 # _model_server_result.job_id txSaCLllCHg-IpFoCDC7aw _model_server_result.datetime_utc '2024-11-26 04:24:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1mv5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":3601}' # _entry.id 1MV5 # _exptl.entry_id 1MV5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1MV5 _cell.length_a 141.866 _cell.length_b 141.866 _cell.length_c 120.965 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1MV5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 G MG MG . C MG 1601 1_555 C OD1 ASP 12 C ASP 2353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.746 ? metalc ? metalc2 J O1A ADP . D ADP 3600 1_555 I MG MG . D MG 3601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? metalc ? metalc3 I MG MG . D MG 3601 1_555 N O HOH . D HOH 4046 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.057 ? metalc ? metalc4 I MG MG . D MG 3601 1_555 N O HOH . D HOH 4078 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.643 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1MV5 _atom_sites.fract_transf_matrix[1][1] 0.007049 _atom_sites.fract_transf_matrix[1][2] 0.00407 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008139 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008267 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ATP A 1 601 601 ATP ATP . F 3 ADP B 1 1600 1600 ADP ADP . G 4 MG C 1 1601 1601 MG MG . H 2 ATP C 1 2601 2601 ATP ATP . I 4 MG D 1 3601 3601 MG MG . J 3 ADP D 1 3600 3600 ADP ADP . K 5 HOH A 1 4007 4007 HOH HOH . K 5 HOH A 2 4011 4011 HOH HOH . K 5 HOH A 3 4018 4018 HOH HOH . K 5 HOH A 4 4019 4019 HOH HOH . K 5 HOH A 5 4023 4023 HOH HOH . K 5 HOH A 6 4035 4035 HOH HOH . K 5 HOH A 7 4036 4036 HOH HOH . K 5 HOH A 8 4038 4038 HOH HOH . K 5 HOH A 9 4040 4040 HOH HOH . K 5 HOH A 10 4043 4043 HOH HOH . K 5 HOH A 11 4044 4044 HOH HOH . K 5 HOH A 12 4047 4047 HOH HOH . K 5 HOH A 13 4050 4050 HOH HOH . K 5 HOH A 14 4053 4053 HOH HOH . K 5 HOH A 15 4055 4055 HOH HOH . K 5 HOH A 16 4058 4058 HOH HOH . K 5 HOH A 17 4060 4060 HOH HOH . K 5 HOH A 18 4065 4065 HOH HOH . K 5 HOH A 19 4066 4066 HOH HOH . K 5 HOH A 20 4071 4071 HOH HOH . K 5 HOH A 21 4074 4074 HOH HOH . K 5 HOH A 22 4076 4076 HOH HOH . K 5 HOH A 23 4077 4077 HOH HOH . L 5 HOH B 1 4001 4001 HOH HOH . L 5 HOH B 2 4002 4002 HOH HOH . L 5 HOH B 3 4003 4003 HOH HOH . L 5 HOH B 4 4004 4004 HOH HOH . L 5 HOH B 5 4005 4005 HOH HOH . L 5 HOH B 6 4026 4026 HOH HOH . L 5 HOH B 7 4027 4027 HOH HOH . L 5 HOH B 8 4028 4028 HOH HOH . L 5 HOH B 9 4030 4030 HOH HOH . L 5 HOH B 10 4063 4063 HOH HOH . L 5 HOH B 11 4064 4064 HOH HOH . L 5 HOH B 12 4068 4068 HOH HOH . M 5 HOH C 1 4008 4008 HOH HOH . M 5 HOH C 2 4009 4009 HOH HOH . M 5 HOH C 3 4010 4010 HOH HOH . M 5 HOH C 4 4012 4012 HOH HOH . M 5 HOH C 5 4013 4013 HOH HOH . M 5 HOH C 6 4014 4014 HOH HOH . M 5 HOH C 7 4015 4015 HOH HOH . M 5 HOH C 8 4021 4021 HOH HOH . M 5 HOH C 9 4024 4024 HOH HOH . M 5 HOH C 10 4029 4029 HOH HOH . M 5 HOH C 11 4031 4031 HOH HOH . M 5 HOH C 12 4032 4032 HOH HOH . M 5 HOH C 13 4034 4034 HOH HOH . M 5 HOH C 14 4048 4048 HOH HOH . M 5 HOH C 15 4049 4049 HOH HOH . M 5 HOH C 16 4052 4052 HOH HOH . M 5 HOH C 17 4056 4056 HOH HOH . M 5 HOH C 18 4057 4057 HOH HOH . M 5 HOH C 19 4059 4059 HOH HOH . M 5 HOH C 20 4062 4062 HOH HOH . M 5 HOH C 21 4069 4069 HOH HOH . M 5 HOH C 22 4070 4070 HOH HOH . M 5 HOH C 23 4072 4072 HOH HOH . M 5 HOH C 24 4073 4073 HOH HOH . N 5 HOH D 1 4006 4006 HOH HOH . N 5 HOH D 2 4016 4016 HOH HOH . N 5 HOH D 3 4017 4017 HOH HOH . N 5 HOH D 4 4020 4020 HOH HOH . N 5 HOH D 5 4022 4022 HOH HOH . N 5 HOH D 6 4025 4025 HOH HOH . N 5 HOH D 7 4033 4033 HOH HOH . N 5 HOH D 8 4037 4037 HOH HOH . N 5 HOH D 9 4039 4039 HOH HOH . N 5 HOH D 10 4041 4041 HOH HOH . N 5 HOH D 11 4042 4042 HOH HOH . N 5 HOH D 12 4045 4045 HOH HOH . N 5 HOH D 13 4046 4046 HOH HOH . N 5 HOH D 14 4051 4051 HOH HOH . N 5 HOH D 15 4054 4054 HOH HOH . N 5 HOH D 16 4061 4061 HOH HOH . N 5 HOH D 17 4067 4067 HOH HOH . N 5 HOH D 18 4075 4075 HOH HOH . N 5 HOH D 19 4078 4078 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 4 _atom_site.Cartn_x 46.686 _atom_site.Cartn_y 29.635 _atom_site.Cartn_z 84.316 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 36.8 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 3601 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 371 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #