data_1MVO # _model_server_result.job_id tI_XyJ_qIFNpJ0tFovxi3Q _model_server_result.datetime_utc '2024-11-24 11:27:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1mvo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 1MVO # _exptl.entry_id 1MVO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1MVO _cell.length_a 45.704 _cell.length_b 45.704 _cell.length_c 134.811 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1MVO _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_565 x+1/2,-y+3/2,-z+3/4 1 0 0 0 -1 0 0 0 -1 22.852 68.556 101.10825 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 11 A ASP 10 1_555 B MN MN . A MN 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc2 A OE2 GLU 38 A GLU 37 1_555 C NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc3 A OD2 ASP 54 A ASP 53 1_555 B MN MN . A MN 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc4 A O MET 56 A MET 55 1_555 B MN MN . A MN 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc5 A O PHE 76 A PHE 75 1_555 D NA NA . A NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? metalc ? metalc6 A O GLY 97 A GLY 96 1_555 D NA NA . A NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc7 A OD2 ASP 99 A ASP 98 1_555 D NA NA . A NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc8 B MN MN . A MN 200 1_555 E O HOH . A HOH 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc9 B MN MN . A MN 200 1_555 E O HOH . A HOH 354 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc10 B MN MN . A MN 200 1_555 E O HOH . A HOH 373 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc11 C NA NA . A NA 201 1_555 E O HOH . A HOH 355 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc12 C NA NA . A NA 201 1_555 E O HOH . A HOH 356 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc13 C NA NA . A NA 201 1_555 E O HOH . A HOH 364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? metalc ? metalc14 C NA NA . A NA 201 1_555 E O HOH . A HOH 372 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc15 C NA NA . A NA 201 1_555 E O HOH . A HOH 375 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc16 D NA NA . A NA 202 1_555 E O HOH . A HOH 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc17 D NA NA . A NA 202 1_555 E O HOH . A HOH 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1MVO _atom_sites.fract_transf_matrix[1][1] 0.02188 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02188 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007418 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 200 200 MN MN . C 3 NA A 1 201 201 NA NA . D 3 NA A 1 202 202 NA NA . E 4 HOH A 1 203 203 HOH HOH . E 4 HOH A 2 204 204 HOH HOH . E 4 HOH A 3 205 205 HOH HOH . E 4 HOH A 4 206 206 HOH HOH . E 4 HOH A 5 207 207 HOH HOH . E 4 HOH A 6 208 208 HOH HOH . E 4 HOH A 7 209 209 HOH HOH . E 4 HOH A 8 210 210 HOH HOH . E 4 HOH A 9 211 211 HOH HOH . E 4 HOH A 10 212 212 HOH HOH . E 4 HOH A 11 213 213 HOH HOH . E 4 HOH A 12 214 214 HOH HOH . E 4 HOH A 13 215 215 HOH HOH . E 4 HOH A 14 216 216 HOH HOH . E 4 HOH A 15 217 217 HOH HOH . E 4 HOH A 16 218 218 HOH HOH . E 4 HOH A 17 219 219 HOH HOH . E 4 HOH A 18 220 220 HOH HOH . E 4 HOH A 19 221 221 HOH HOH . E 4 HOH A 20 222 222 HOH HOH . E 4 HOH A 21 223 223 HOH HOH . E 4 HOH A 22 224 224 HOH HOH . E 4 HOH A 23 225 225 HOH HOH . E 4 HOH A 24 226 226 HOH HOH . E 4 HOH A 25 227 227 HOH HOH . E 4 HOH A 26 228 228 HOH HOH . E 4 HOH A 27 229 229 HOH HOH . E 4 HOH A 28 230 230 HOH HOH . E 4 HOH A 29 231 231 HOH HOH . E 4 HOH A 30 232 232 HOH HOH . E 4 HOH A 31 233 233 HOH HOH . E 4 HOH A 32 234 234 HOH HOH . E 4 HOH A 33 235 235 HOH HOH . E 4 HOH A 34 236 236 HOH HOH . E 4 HOH A 35 237 237 HOH HOH . E 4 HOH A 36 238 238 HOH HOH . E 4 HOH A 37 239 239 HOH HOH . E 4 HOH A 38 240 240 HOH HOH . E 4 HOH A 39 241 241 HOH HOH . E 4 HOH A 40 242 242 HOH HOH . E 4 HOH A 41 243 243 HOH HOH . E 4 HOH A 42 244 244 HOH HOH . E 4 HOH A 43 245 245 HOH HOH . E 4 HOH A 44 246 246 HOH HOH . E 4 HOH A 45 247 247 HOH HOH . E 4 HOH A 46 248 248 HOH HOH . E 4 HOH A 47 249 249 HOH HOH . E 4 HOH A 48 250 250 HOH HOH . E 4 HOH A 49 251 251 HOH HOH . E 4 HOH A 50 252 252 HOH HOH . E 4 HOH A 51 253 253 HOH HOH . E 4 HOH A 52 254 254 HOH HOH . E 4 HOH A 53 255 255 HOH HOH . E 4 HOH A 54 256 256 HOH HOH . E 4 HOH A 55 257 257 HOH HOH . E 4 HOH A 56 258 258 HOH HOH . E 4 HOH A 57 259 259 HOH HOH . E 4 HOH A 58 260 260 HOH HOH . E 4 HOH A 59 261 261 HOH HOH . E 4 HOH A 60 262 262 HOH HOH . E 4 HOH A 61 263 263 HOH HOH . E 4 HOH A 62 264 264 HOH HOH . E 4 HOH A 63 265 265 HOH HOH . E 4 HOH A 64 266 266 HOH HOH . E 4 HOH A 65 267 267 HOH HOH . E 4 HOH A 66 268 268 HOH HOH . E 4 HOH A 67 269 269 HOH HOH . E 4 HOH A 68 270 270 HOH HOH . E 4 HOH A 69 271 271 HOH HOH . E 4 HOH A 70 272 272 HOH HOH . E 4 HOH A 71 273 273 HOH HOH . E 4 HOH A 72 274 274 HOH HOH . E 4 HOH A 73 275 275 HOH HOH . E 4 HOH A 74 276 276 HOH HOH . E 4 HOH A 75 277 277 HOH HOH . E 4 HOH A 76 278 278 HOH HOH . E 4 HOH A 77 279 279 HOH HOH . E 4 HOH A 78 280 280 HOH HOH . E 4 HOH A 79 281 281 HOH HOH . E 4 HOH A 80 282 282 HOH HOH . E 4 HOH A 81 283 283 HOH HOH . E 4 HOH A 82 284 284 HOH HOH . E 4 HOH A 83 285 285 HOH HOH . E 4 HOH A 84 286 286 HOH HOH . E 4 HOH A 85 287 287 HOH HOH . E 4 HOH A 86 288 288 HOH HOH . E 4 HOH A 87 289 289 HOH HOH . E 4 HOH A 88 290 290 HOH HOH . E 4 HOH A 89 291 291 HOH HOH . E 4 HOH A 90 292 292 HOH HOH . E 4 HOH A 91 293 293 HOH HOH . E 4 HOH A 92 294 294 HOH HOH . E 4 HOH A 93 295 295 HOH HOH . E 4 HOH A 94 296 296 HOH HOH . E 4 HOH A 95 297 297 HOH HOH . E 4 HOH A 96 298 298 HOH HOH . E 4 HOH A 97 299 299 HOH HOH . E 4 HOH A 98 300 300 HOH HOH . E 4 HOH A 99 301 301 HOH HOH . E 4 HOH A 100 302 302 HOH HOH . E 4 HOH A 101 303 303 HOH HOH . E 4 HOH A 102 304 304 HOH HOH . E 4 HOH A 103 305 305 HOH HOH . E 4 HOH A 104 306 306 HOH HOH . E 4 HOH A 105 307 307 HOH HOH . E 4 HOH A 106 308 308 HOH HOH . E 4 HOH A 107 309 309 HOH HOH . E 4 HOH A 108 310 310 HOH HOH . E 4 HOH A 109 311 311 HOH HOH . E 4 HOH A 110 312 312 HOH HOH . E 4 HOH A 111 313 313 HOH HOH . E 4 HOH A 112 314 314 HOH HOH . E 4 HOH A 113 315 315 HOH HOH . E 4 HOH A 114 316 316 HOH HOH . E 4 HOH A 115 317 317 HOH HOH . E 4 HOH A 116 318 318 HOH HOH . E 4 HOH A 117 319 319 HOH HOH . E 4 HOH A 118 320 320 HOH HOH . E 4 HOH A 119 321 321 HOH HOH . E 4 HOH A 120 322 322 HOH HOH . E 4 HOH A 121 323 323 HOH HOH . E 4 HOH A 122 324 324 HOH HOH . E 4 HOH A 123 325 325 HOH HOH . E 4 HOH A 124 326 326 HOH HOH . E 4 HOH A 125 327 327 HOH HOH . E 4 HOH A 126 328 328 HOH HOH . E 4 HOH A 127 329 329 HOH HOH . E 4 HOH A 128 330 330 HOH HOH . E 4 HOH A 129 331 331 HOH HOH . E 4 HOH A 130 332 332 HOH HOH . E 4 HOH A 131 333 333 HOH HOH . E 4 HOH A 132 334 334 HOH HOH . E 4 HOH A 133 335 335 HOH HOH . E 4 HOH A 134 336 336 HOH HOH . E 4 HOH A 135 337 337 HOH HOH . E 4 HOH A 136 338 338 HOH HOH . E 4 HOH A 137 339 339 HOH HOH . E 4 HOH A 138 340 340 HOH HOH . E 4 HOH A 139 341 341 HOH HOH . E 4 HOH A 140 342 342 HOH HOH . E 4 HOH A 141 343 343 HOH HOH . E 4 HOH A 142 344 344 HOH HOH . E 4 HOH A 143 345 345 HOH HOH . E 4 HOH A 144 346 346 HOH HOH . E 4 HOH A 145 347 347 HOH HOH . E 4 HOH A 146 348 348 HOH HOH . E 4 HOH A 147 349 349 HOH HOH . E 4 HOH A 148 350 350 HOH HOH . E 4 HOH A 149 351 351 HOH HOH . E 4 HOH A 150 352 352 HOH HOH . E 4 HOH A 151 353 353 HOH HOH . E 4 HOH A 152 354 354 HOH HOH . E 4 HOH A 153 355 355 HOH HOH . E 4 HOH A 154 356 356 HOH HOH . E 4 HOH A 155 357 357 HOH HOH . E 4 HOH A 156 358 358 HOH HOH . E 4 HOH A 157 359 359 HOH HOH . E 4 HOH A 158 360 360 HOH HOH . E 4 HOH A 159 361 361 HOH HOH . E 4 HOH A 160 362 362 HOH HOH . E 4 HOH A 161 363 363 HOH HOH . E 4 HOH A 162 364 364 HOH HOH . E 4 HOH A 163 365 365 HOH HOH . E 4 HOH A 164 366 366 HOH HOH . E 4 HOH A 165 367 367 HOH HOH . E 4 HOH A 166 368 368 HOH HOH . E 4 HOH A 167 369 369 HOH HOH . E 4 HOH A 168 370 370 HOH HOH . E 4 HOH A 169 371 371 HOH HOH . E 4 HOH A 170 372 372 HOH HOH . E 4 HOH A 171 373 373 HOH HOH . E 4 HOH A 172 374 374 HOH HOH . E 4 HOH A 173 375 375 HOH HOH . E 4 HOH A 174 376 376 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 15.752 _atom_site.Cartn_y 29.376 _atom_site.Cartn_z 40.132 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 17.72 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 202 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #