data_1MWU # _model_server_result.job_id TVsr0az-ReHNyrWznF0epA _model_server_result.datetime_utc '2024-10-11 05:29:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1mwu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":704}' # _entry.id 1MWU # _exptl.entry_id 1MWU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 112.411 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CADMIUM ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1MWU _cell.length_a 80.672 _cell.length_b 103.21 _cell.length_c 186.494 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1MWU _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,N 1 1 B,G,H,I,J,K,L,M,O 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 H N N ? 3 I N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 D CD CD . A CD 702 1_555 N O HOH . A HOH 811 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.899 ? metalc ? metalc2 H CD CD . B CD 702 1_555 N O HOH . A HOH 819 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.927 ? metalc ? metalc3 B OE1 GLU 123 B GLU 145 1_555 D CD CD . A CD 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc4 B NE2 HIS 289 B HIS 311 1_555 J CD CD . B CD 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? metalc ? metalc5 B OE2 GLU 123 B GLU 145 1_555 H CD CD . B CD 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? metalc ? metalc6 B OD2 ASP 187 B ASP 209 1_555 E CD CD . A CD 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? metalc ? metalc7 A O GLY 113 A GLY 135 1_555 E CD CD . A CD 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc8 A OE2 GLU 123 A GLU 145 1_555 D CD CD . A CD 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc9 A OD1 ASP 187 A ASP 209 1_555 J CD CD . B CD 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc10 A OE1 GLU 123 A GLU 145 1_555 H CD CD . B CD 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc11 B O GLY 113 B GLY 135 1_555 J CD CD . B CD 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc12 B ND1 HIS 121 B HIS 143 1_555 H CD CD . B CD 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc13 B OD2 ASP 551 B ASP 573 1_555 I CD CD . B CD 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc14 A NE2 HIS 289 A HIS 311 1_555 E CD CD . A CD 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc15 B OD1 ASP 187 B ASP 209 1_555 E CD CD . A CD 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? metalc ? metalc16 A ND1 HIS 121 A HIS 143 1_555 D CD CD . A CD 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc17 A OD2 ASP 187 A ASP 209 1_555 J CD CD . B CD 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.428 ? metalc ? metalc18 A OE2 GLU 123 A GLU 145 1_555 H CD CD . B CD 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? metalc ? metalc19 B OE2 GLU 123 B GLU 145 1_555 D CD CD . A CD 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.573 ? covale ? covale1 B OG SER 381 B SER 403 1_555 G C 7EP . B 7EP 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.364 ? covale ? covale2 A OG SER 381 A SER 403 1_555 C C 7EP . A 7EP 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.365 ? # _chem_comp.formula 'Cd 2' _chem_comp.formula_weight 112.411 _chem_comp.id CD _chem_comp.mon_nstd_flag . _chem_comp.name 'CADMIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1MWU _atom_sites.fract_transf_matrix[1][1] 0.012396 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009689 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005362 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 7EP A 1 701 403 7EP MCS . D 3 CD A 1 702 1 CD CD2 . E 3 CD A 1 703 4 CD CD2 . F 4 CL A 1 704 6 CL CL1 . G 2 7EP B 1 701 403 7EP MCS . H 3 CD B 1 702 2 CD CD2 . I 3 CD B 1 704 5 CD CD2 . J 3 CD B 1 703 3 CD CD2 . K 4 CL B 1 705 7 CL CL1 . L 4 CL B 1 706 8 CL CL1 . M 4 CL B 1 707 9 CL CL1 . N 5 HOH A 1 801 1 HOH WAT . N 5 HOH A 2 802 2 HOH WAT . N 5 HOH A 3 803 3 HOH WAT . N 5 HOH A 4 804 4 HOH WAT . N 5 HOH A 5 805 6 HOH WAT . N 5 HOH A 6 806 7 HOH WAT . N 5 HOH A 7 807 9 HOH WAT . N 5 HOH A 8 808 10 HOH WAT . N 5 HOH A 9 809 12 HOH WAT . N 5 HOH A 10 810 13 HOH WAT . N 5 HOH A 11 811 14 HOH WAT . N 5 HOH A 12 812 15 HOH WAT . N 5 HOH A 13 813 19 HOH WAT . N 5 HOH A 14 814 22 HOH WAT . N 5 HOH A 15 815 24 HOH WAT . N 5 HOH A 16 816 25 HOH WAT . N 5 HOH A 17 817 27 HOH WAT . N 5 HOH A 18 818 28 HOH WAT . N 5 HOH A 19 819 29 HOH WAT . N 5 HOH A 20 820 30 HOH WAT . N 5 HOH A 21 821 32 HOH WAT . N 5 HOH A 22 822 33 HOH WAT . N 5 HOH A 23 823 34 HOH WAT . N 5 HOH A 24 824 35 HOH WAT . N 5 HOH A 25 825 36 HOH WAT . N 5 HOH A 26 826 37 HOH WAT . N 5 HOH A 27 827 38 HOH WAT . N 5 HOH A 28 828 39 HOH WAT . N 5 HOH A 29 829 40 HOH WAT . N 5 HOH A 30 830 41 HOH WAT . N 5 HOH A 31 831 43 HOH WAT . N 5 HOH A 32 832 44 HOH WAT . N 5 HOH A 33 833 45 HOH WAT . N 5 HOH A 34 834 50 HOH WAT . N 5 HOH A 35 835 52 HOH WAT . N 5 HOH A 36 836 53 HOH WAT . N 5 HOH A 37 837 61 HOH WAT . N 5 HOH A 38 838 62 HOH WAT . N 5 HOH A 39 839 63 HOH WAT . N 5 HOH A 40 840 65 HOH WAT . N 5 HOH A 41 841 66 HOH WAT . N 5 HOH A 42 842 67 HOH WAT . O 5 HOH B 1 801 5 HOH WAT . O 5 HOH B 2 802 8 HOH WAT . O 5 HOH B 3 803 11 HOH WAT . O 5 HOH B 4 804 16 HOH WAT . O 5 HOH B 5 805 17 HOH WAT . O 5 HOH B 6 806 18 HOH WAT . O 5 HOH B 7 807 20 HOH WAT . O 5 HOH B 8 808 21 HOH WAT . O 5 HOH B 9 809 23 HOH WAT . O 5 HOH B 10 810 26 HOH WAT . O 5 HOH B 11 811 31 HOH WAT . O 5 HOH B 12 812 42 HOH WAT . O 5 HOH B 13 813 46 HOH WAT . O 5 HOH B 14 814 47 HOH WAT . O 5 HOH B 15 815 48 HOH WAT . O 5 HOH B 16 816 49 HOH WAT . O 5 HOH B 17 817 51 HOH WAT . O 5 HOH B 18 818 54 HOH WAT . O 5 HOH B 19 819 55 HOH WAT . O 5 HOH B 20 820 56 HOH WAT . O 5 HOH B 21 821 57 HOH WAT . O 5 HOH B 22 822 58 HOH WAT . O 5 HOH B 23 823 59 HOH WAT . O 5 HOH B 24 824 60 HOH WAT . O 5 HOH B 25 825 64 HOH WAT . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CD _atom_site.label_atom_id CD _atom_site.label_comp_id CD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 3 _atom_site.Cartn_x -20.514 _atom_site.Cartn_y 38.538 _atom_site.Cartn_z 85.015 _atom_site.occupancy 0.54 _atom_site.B_iso_or_equiv 80.18 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CD _atom_site.auth_comp_id CD _atom_site.auth_seq_id 704 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #