data_1N07 # _model_server_result.job_id 9V02uNbcfqcpdGb5cbNQww _model_server_result.datetime_utc '2025-03-06 07:08:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1n07 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":202}' # _entry.id 1N07 # _exptl.entry_id 1N07 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90.69 _cell.angle_beta 111.03 _cell.angle_gamma 97.31 _cell.entry_id 1N07 _cell.length_a 38.807 _cell.length_b 45.767 _cell.length_c 51.895 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1N07 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 114 n n N1 C10 FMN doub 115 n n C2 O2 FMN doub 116 n n C2 N3 FMN sing 117 n n N3 C4 FMN sing 118 n n N3 HN3 FMN sing 119 n n C4 O4 FMN doub 120 n n C4 C4A FMN sing 121 n n C4A N5 FMN doub 122 n n C4A C10 FMN sing 123 n n N5 C5A FMN sing 124 n n C5A C6 FMN doub 125 n y C5A C9A FMN sing 126 n y C6 C7 FMN sing 127 n y C6 H6 FMN sing 128 n n C7 C7M FMN sing 129 n n C7 C8 FMN doub 130 n y C7M HM71 FMN sing 131 n n C7M HM72 FMN sing 132 n n C7M HM73 FMN sing 133 n n C8 C8M FMN sing 134 n n C8 C9 FMN sing 135 n y C8M HM81 FMN sing 136 n n C8M HM82 FMN sing 137 n n C8M HM83 FMN sing 138 n n C9 C9A FMN doub 139 n y C9 H9 FMN sing 140 n n C9A N10 FMN sing 141 n n N10 C10 FMN sing 142 n n N10 C1' FMN sing 143 n n C1' C2' FMN sing 144 n n C1' "H1'1" FMN sing 145 n n C1' "H1'2" FMN sing 146 n n C2' O2' FMN sing 147 n n C2' C3' FMN sing 148 n n C2' H2' FMN sing 149 n n O2' HO2' FMN sing 150 n n C3' O3' FMN sing 151 n n C3' C4' FMN sing 152 n n C3' H3' FMN sing 153 n n O3' HO3' FMN sing 154 n n C4' O4' FMN sing 155 n n C4' C5' FMN sing 156 n n C4' H4' FMN sing 157 n n O4' HO4' FMN sing 158 n n C5' O5' FMN sing 159 n n C5' "H5'1" FMN sing 160 n n C5' "H5'2" FMN sing 161 n n O5' P FMN sing 162 n n P O1P FMN doub 163 n n P O2P FMN sing 164 n n P O3P FMN sing 165 n n O2P HOP2 FMN sing 166 n n O3P HOP3 FMN sing 167 n n # _atom_sites.entry_id 1N07 _atom_sites.fract_transf_matrix[1][1] 0.025769 _atom_sites.fract_transf_matrix[1][2] 0.003306 _atom_sites.fract_transf_matrix[1][3] 0.010133 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022029 _atom_sites.fract_transf_matrix[2][3] 0.001376 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020685 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ADP A 1 164 1 ADP ADP . D 3 FMN A 1 165 2 FMN FMN . E 2 ADP B 1 201 1 ADP ADP . F 3 FMN B 1 202 2 FMN FMN . G 4 HOH A 1 166 1 HOH TIP . G 4 HOH A 2 167 4 HOH TIP . G 4 HOH A 3 168 6 HOH TIP . G 4 HOH A 4 169 9 HOH TIP . G 4 HOH A 5 170 10 HOH TIP . G 4 HOH A 6 171 12 HOH TIP . G 4 HOH A 7 172 14 HOH TIP . G 4 HOH A 8 173 17 HOH TIP . G 4 HOH A 9 174 18 HOH TIP . G 4 HOH A 10 175 20 HOH TIP . G 4 HOH A 11 176 21 HOH TIP . G 4 HOH A 12 177 22 HOH TIP . G 4 HOH A 13 178 23 HOH TIP . G 4 HOH A 14 179 25 HOH TIP . G 4 HOH A 15 180 27 HOH TIP . G 4 HOH A 16 181 30 HOH TIP . G 4 HOH A 17 182 31 HOH TIP . G 4 HOH A 18 183 36 HOH TIP . G 4 HOH A 19 184 37 HOH TIP . G 4 HOH A 20 185 41 HOH TIP . G 4 HOH A 21 186 43 HOH TIP . G 4 HOH A 22 187 44 HOH TIP . G 4 HOH A 23 188 46 HOH TIP . G 4 HOH A 24 189 47 HOH TIP . G 4 HOH A 25 190 49 HOH TIP . G 4 HOH A 26 191 50 HOH TIP . G 4 HOH A 27 192 51 HOH TIP . G 4 HOH A 28 193 53 HOH TIP . G 4 HOH A 29 194 54 HOH TIP . G 4 HOH A 30 195 55 HOH TIP . G 4 HOH A 31 196 56 HOH TIP . G 4 HOH A 32 197 57 HOH TIP . G 4 HOH A 33 198 58 HOH TIP . G 4 HOH A 34 199 59 HOH TIP . G 4 HOH A 35 200 60 HOH TIP . G 4 HOH A 36 201 63 HOH TIP . G 4 HOH A 37 202 67 HOH TIP . G 4 HOH A 38 203 69 HOH TIP . G 4 HOH A 39 204 72 HOH TIP . G 4 HOH A 40 205 78 HOH TIP . G 4 HOH A 41 206 79 HOH TIP . G 4 HOH A 42 207 81 HOH TIP . G 4 HOH A 43 208 82 HOH TIP . H 4 HOH B 1 203 2 HOH TIP . H 4 HOH B 2 204 3 HOH TIP . H 4 HOH B 3 205 5 HOH TIP . H 4 HOH B 4 206 7 HOH TIP . H 4 HOH B 5 207 8 HOH TIP . H 4 HOH B 6 208 11 HOH TIP . H 4 HOH B 7 209 13 HOH TIP . H 4 HOH B 8 210 15 HOH TIP . H 4 HOH B 9 211 16 HOH TIP . H 4 HOH B 10 212 19 HOH TIP . H 4 HOH B 11 213 24 HOH TIP . H 4 HOH B 12 214 26 HOH TIP . H 4 HOH B 13 215 28 HOH TIP . H 4 HOH B 14 216 29 HOH TIP . H 4 HOH B 15 217 32 HOH TIP . H 4 HOH B 16 218 33 HOH TIP . H 4 HOH B 17 219 34 HOH TIP . H 4 HOH B 18 220 35 HOH TIP . H 4 HOH B 19 221 38 HOH TIP . H 4 HOH B 20 222 39 HOH TIP . H 4 HOH B 21 223 40 HOH TIP . H 4 HOH B 22 224 42 HOH TIP . H 4 HOH B 23 225 45 HOH TIP . H 4 HOH B 24 226 48 HOH TIP . H 4 HOH B 25 227 52 HOH TIP . H 4 HOH B 26 228 61 HOH TIP . H 4 HOH B 27 229 62 HOH TIP . H 4 HOH B 28 230 64 HOH TIP . H 4 HOH B 29 231 65 HOH TIP . H 4 HOH B 30 232 66 HOH TIP . H 4 HOH B 31 233 68 HOH TIP . H 4 HOH B 32 234 70 HOH TIP . H 4 HOH B 33 235 71 HOH TIP . H 4 HOH B 34 236 73 HOH TIP . H 4 HOH B 35 237 74 HOH TIP . H 4 HOH B 36 238 75 HOH TIP . H 4 HOH B 37 239 76 HOH TIP . H 4 HOH B 38 240 77 HOH TIP . H 4 HOH B 39 241 80 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . F 3 14.443 21.476 20.174 1 50.65 ? N1 FMN 202 B 1 HETATM 2 C C2 FMN . . . F 3 14.884 21.372 18.895 1 51.73 ? C2 FMN 202 B 1 HETATM 3 O O2 FMN . . . F 3 16.016 21.089 18.606 1 53.97 ? O2 FMN 202 B 1 HETATM 4 N N3 FMN . . . F 3 13.954 21.619 17.826 1 51.16 ? N3 FMN 202 B 1 HETATM 5 C C4 FMN . . . F 3 12.648 21.945 17.986 1 48.34 ? C4 FMN 202 B 1 HETATM 6 O O4 FMN . . . F 3 11.94 22.172 16.996 1 50.05 ? O4 FMN 202 B 1 HETATM 7 C C4A FMN . . . F 3 12.176 22.063 19.372 1 49.35 ? C4A FMN 202 B 1 HETATM 8 N N5 FMN . . . F 3 10.907 22.318 19.651 1 41.31 ? N5 FMN 202 B 1 HETATM 9 C C5A FMN . . . F 3 10.474 22.245 20.949 1 40.96 ? C5A FMN 202 B 1 HETATM 10 C C6 FMN . . . F 3 9.053 22.407 21.241 1 35.6 ? C6 FMN 202 B 1 HETATM 11 C C7 FMN . . . F 3 8.548 22.486 22.496 1 32.21 ? C7 FMN 202 B 1 HETATM 12 C C7M FMN . . . F 3 7.038 22.645 22.739 1 32.27 ? C7M FMN 202 B 1 HETATM 13 C C8 FMN . . . F 3 9.429 22.163 23.641 1 35.92 ? C8 FMN 202 B 1 HETATM 14 C C8M FMN . . . F 3 8.87 22.098 25.047 1 34.7 ? C8M FMN 202 B 1 HETATM 15 C C9 FMN . . . F 3 10.815 22.038 23.4 1 37.93 ? C9 FMN 202 B 1 HETATM 16 C C9A FMN . . . F 3 11.374 22.067 22.103 1 45.01 ? C9A FMN 202 B 1 HETATM 17 N N10 FMN . . . F 3 12.766 21.923 21.758 1 51.76 ? N10 FMN 202 B 1 HETATM 18 C C10 FMN . . . F 3 13.182 21.788 20.44 1 51.39 ? C10 FMN 202 B 1 HETATM 19 C C1' FMN . . . F 3 13.85 21.739 22.771 1 62.76 ? C1' FMN 202 B 1 HETATM 20 C C2' FMN . . . F 3 14.221 20.292 23.075 1 71.77 ? C2' FMN 202 B 1 HETATM 21 O O2' FMN . . . F 3 13.143 19.554 23.671 1 71.13 ? O2' FMN 202 B 1 HETATM 22 C C3' FMN . . . F 3 15.455 20.32 24.038 1 76.91 ? C3' FMN 202 B 1 HETATM 23 O O3' FMN . . . F 3 16.489 19.441 23.508 1 77.03 ? O3' FMN 202 B 1 HETATM 24 C C4' FMN . . . F 3 15.254 19.968 25.499 1 82.74 ? C4' FMN 202 B 1 HETATM 25 O O4' FMN . . . F 3 16.477 20.317 26.196 1 85.97 ? O4' FMN 202 B 1 HETATM 26 C C5' FMN . . . F 3 15.007 18.513 25.836 1 87.66 ? C5' FMN 202 B 1 HETATM 27 O O5' FMN . . . F 3 14.634 18.457 27.232 1 94.34 ? O5' FMN 202 B 1 HETATM 28 P P FMN . . . F 3 15.539 17.757 28.339 1 99.33 ? P FMN 202 B 1 HETATM 29 O O1P FMN . . . F 3 16.864 18.479 28.372 1 98.19 ? O1P FMN 202 B 1 HETATM 30 O O2P FMN . . . F 3 15.683 16.293 28.005 1 97.77 ? O2P FMN 202 B 1 HETATM 31 O O3P FMN . . . F 3 14.752 17.989 29.682 1 97.08 ? O3P FMN 202 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #