data_1N21 # _model_server_result.job_id smVF-LBg2hDuVUT2j7Y8yw _model_server_result.datetime_utc '2024-12-19 00:22:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1n21 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":703}' # _entry.id 1N21 # _exptl.entry_id 1N21 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1N21 _cell.length_a 198.38 _cell.length_b 198.38 _cell.length_c 122.84 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1N21 _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 63 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/2 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 99.19 171.80212 61.42 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 302 A ASP 351 1_555 B MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc2 A OD2 ASP 302 A ASP 351 1_555 D MG MG . A MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? metalc ? metalc3 A OD1 ASP 302 A ASP 351 1_555 D MG MG . A MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.11 ? metalc ? metalc4 A OD2 ASP 306 A ASP 355 1_555 B MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.782 ? metalc ? metalc5 A OD2 ASP 306 A ASP 355 1_555 D MG MG . A MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc6 A OD1 ASP 447 A ASP 496 1_555 C MG MG . A MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc7 A OG1 THR 451 A THR 500 1_555 C MG MG . A MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? metalc ? metalc8 A OE2 GLU 455 A GLU 504 1_555 C MG MG . A MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc9 B MG MG . A MG 701 1_555 E O5 3AG . A 3AG 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? metalc ? metalc10 B MG MG . A MG 701 1_555 F O HOH . A HOH 921 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? metalc ? metalc11 B MG MG . A MG 701 1_555 F O HOH . A HOH 922 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc12 C MG MG . A MG 702 1_555 E O4 3AG . A 3AG 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.789 ? metalc ? metalc13 C MG MG . A MG 702 1_555 E O6 3AG . A 3AG 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc14 C MG MG . A MG 702 1_555 F O HOH . A HOH 919 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? metalc ? metalc15 D MG MG . A MG 703 1_555 E O1 3AG . A 3AG 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc16 D MG MG . A MG 703 1_555 E O3 3AG . A 3AG 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.026 ? metalc ? metalc17 D MG MG . A MG 703 1_555 E O5 3AG . A 3AG 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.935 ? metalc ? metalc18 D MG MG . A MG 703 1_555 F O HOH . A HOH 920 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? metalc ? metalc19 D MG MG . A MG 703 1_555 F O HOH . A HOH 921 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.881 ? metalc ? metalc20 D MG MG . A MG 703 1_555 F O HOH . A HOH 923 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1N21 _atom_sites.fract_transf_matrix[1][1] 0.005041 _atom_sites.fract_transf_matrix[1][2] 0.00291 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005821 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008141 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 701 701 MG MG . C 2 MG A 1 702 702 MG MG . D 2 MG A 1 703 703 MG MG . E 3 3AG A 1 900 900 3AG 3AG . F 4 HOH A 1 901 1 HOH WAT . F 4 HOH A 2 902 2 HOH WAT . F 4 HOH A 3 903 3 HOH WAT . F 4 HOH A 4 904 4 HOH WAT . F 4 HOH A 5 905 5 HOH WAT . F 4 HOH A 6 906 6 HOH WAT . F 4 HOH A 7 907 7 HOH WAT . F 4 HOH A 8 908 8 HOH WAT . F 4 HOH A 9 909 9 HOH WAT . F 4 HOH A 10 910 10 HOH WAT . F 4 HOH A 11 911 11 HOH WAT . F 4 HOH A 12 912 12 HOH WAT . F 4 HOH A 13 913 13 HOH WAT . F 4 HOH A 14 914 14 HOH WAT . F 4 HOH A 15 915 15 HOH WAT . F 4 HOH A 16 916 16 HOH WAT . F 4 HOH A 17 917 17 HOH WAT . F 4 HOH A 18 918 18 HOH WAT . F 4 HOH A 19 919 19 HOH WAT . F 4 HOH A 20 920 20 HOH WAT . F 4 HOH A 21 921 21 HOH WAT . F 4 HOH A 22 922 22 HOH WAT . F 4 HOH A 23 923 23 HOH WAT . F 4 HOH A 24 924 24 HOH WAT . F 4 HOH A 25 925 110 HOH WAT . F 4 HOH A 26 926 111 HOH WAT . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 69.116 _atom_site.Cartn_y 85.583 _atom_site.Cartn_z 55.594 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 3.01 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 703 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 1153 _model_server_stats.encode_time_ms 26 _model_server_stats.element_count 1 #