data_1N2F # _model_server_result.job_id eXQVUxpLbHh7E2O-ff1hBg _model_server_result.datetime_utc '2025-03-05 02:25:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1n2f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":172}' # _entry.id 1N2F # _exptl.entry_id 1N2F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 154.251 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2,3-DIHYDROXY-1,4-DITHIOBUTANE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 116.28 _cell.angle_gamma 90 _cell.entry_id 1N2F _cell.length_a 39.911 _cell.length_b 77.51 _cell.length_c 43.079 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1N2F _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C4 H10 O2 S2' _chem_comp.formula_weight 154.251 _chem_comp.id DTT _chem_comp.mon_nstd_flag . _chem_comp.name 2,3-DIHYDROXY-1,4-DITHIOBUTANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1,4-DITHIOTHREITOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S1 C1 DTT sing 83 n n S1 HS1 DTT sing 84 n n C1 C2 DTT sing 85 n n C1 H11 DTT sing 86 n n C1 H12 DTT sing 87 n n C2 O2 DTT sing 88 n n C2 C3 DTT sing 89 n n C2 H2 DTT sing 90 n n O2 HO2 DTT sing 91 n n C3 O3 DTT sing 92 n n C3 C4 DTT sing 93 n n C3 H3 DTT sing 94 n n O3 HO3 DTT sing 95 n n C4 S4 DTT sing 96 n n C4 H41 DTT sing 97 n n C4 H42 DTT sing 98 n n S4 HS2 DTT sing 99 n n # _atom_sites.entry_id 1N2F _atom_sites.fract_transf_matrix[1][1] 0.025056 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.012372 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012902 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025889 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DTT A 1 171 1 DTT DTT . D 2 DTT B 1 172 2 DTT DTT . E 3 HOH A 1 172 2 HOH WAT . E 3 HOH A 2 173 4 HOH WAT . E 3 HOH A 3 174 5 HOH WAT . E 3 HOH A 4 175 8 HOH WAT . E 3 HOH A 5 176 9 HOH WAT . E 3 HOH A 6 177 11 HOH WAT . E 3 HOH A 7 178 13 HOH WAT . E 3 HOH A 8 179 14 HOH WAT . E 3 HOH A 9 180 15 HOH WAT . E 3 HOH A 10 181 18 HOH WAT . E 3 HOH A 11 182 19 HOH WAT . E 3 HOH A 12 183 21 HOH WAT . E 3 HOH A 13 184 23 HOH WAT . E 3 HOH A 14 185 25 HOH WAT . E 3 HOH A 15 186 27 HOH WAT . E 3 HOH A 16 187 31 HOH WAT . E 3 HOH A 17 188 33 HOH WAT . E 3 HOH A 18 189 34 HOH WAT . E 3 HOH A 19 190 35 HOH WAT . E 3 HOH A 20 191 36 HOH WAT . E 3 HOH A 21 192 39 HOH WAT . E 3 HOH A 22 193 42 HOH WAT . E 3 HOH A 23 194 43 HOH WAT . E 3 HOH A 24 195 45 HOH WAT . E 3 HOH A 25 196 46 HOH WAT . E 3 HOH A 26 197 48 HOH WAT . E 3 HOH A 27 198 49 HOH WAT . E 3 HOH A 28 199 50 HOH WAT . E 3 HOH A 29 200 59 HOH WAT . E 3 HOH A 30 201 60 HOH WAT . E 3 HOH A 31 202 61 HOH WAT . E 3 HOH A 32 203 64 HOH WAT . E 3 HOH A 33 204 65 HOH WAT . E 3 HOH A 34 205 66 HOH WAT . E 3 HOH A 35 206 67 HOH WAT . E 3 HOH A 36 207 69 HOH WAT . E 3 HOH A 37 208 71 HOH WAT . E 3 HOH A 38 209 72 HOH WAT . E 3 HOH A 39 210 75 HOH WAT . E 3 HOH A 40 211 78 HOH WAT . E 3 HOH A 41 212 79 HOH WAT . E 3 HOH A 42 213 80 HOH WAT . E 3 HOH A 43 214 83 HOH WAT . E 3 HOH A 44 215 86 HOH WAT . E 3 HOH A 45 216 88 HOH WAT . E 3 HOH A 46 217 93 HOH WAT . E 3 HOH A 47 218 94 HOH WAT . E 3 HOH A 48 219 95 HOH WAT . E 3 HOH A 49 220 96 HOH WAT . E 3 HOH A 50 221 98 HOH WAT . E 3 HOH A 51 222 100 HOH WAT . E 3 HOH A 52 223 101 HOH WAT . E 3 HOH A 53 224 103 HOH WAT . E 3 HOH A 54 225 104 HOH WAT . E 3 HOH A 55 226 106 HOH WAT . E 3 HOH A 56 227 107 HOH WAT . E 3 HOH A 57 228 111 HOH WAT . E 3 HOH A 58 229 112 HOH WAT . E 3 HOH A 59 230 114 HOH WAT . E 3 HOH A 60 231 115 HOH WAT . E 3 HOH A 61 232 118 HOH WAT . E 3 HOH A 62 233 120 HOH WAT . E 3 HOH A 63 234 122 HOH WAT . E 3 HOH A 64 235 123 HOH WAT . E 3 HOH A 65 236 124 HOH WAT . E 3 HOH A 66 237 126 HOH WAT . E 3 HOH A 67 238 128 HOH WAT . E 3 HOH A 68 239 130 HOH WAT . E 3 HOH A 69 240 132 HOH WAT . E 3 HOH A 70 241 133 HOH WAT . E 3 HOH A 71 242 137 HOH WAT . E 3 HOH A 72 243 138 HOH WAT . E 3 HOH A 73 244 140 HOH WAT . E 3 HOH A 74 245 142 HOH WAT . E 3 HOH A 75 246 144 HOH WAT . E 3 HOH A 76 247 148 HOH WAT . E 3 HOH A 77 248 151 HOH WAT . E 3 HOH A 78 249 152 HOH WAT . E 3 HOH A 79 250 153 HOH WAT . E 3 HOH A 80 251 157 HOH WAT . E 3 HOH A 81 252 159 HOH WAT . E 3 HOH A 82 253 160 HOH WAT . E 3 HOH A 83 254 161 HOH WAT . E 3 HOH A 84 255 163 HOH WAT . E 3 HOH A 85 256 165 HOH WAT . E 3 HOH A 86 257 170 HOH WAT . F 3 HOH B 1 173 1 HOH WAT . F 3 HOH B 2 174 3 HOH WAT . F 3 HOH B 3 175 6 HOH WAT . F 3 HOH B 4 176 7 HOH WAT . F 3 HOH B 5 177 10 HOH WAT . F 3 HOH B 6 178 12 HOH WAT . F 3 HOH B 7 179 16 HOH WAT . F 3 HOH B 8 180 17 HOH WAT . F 3 HOH B 9 181 20 HOH WAT . F 3 HOH B 10 182 22 HOH WAT . F 3 HOH B 11 183 24 HOH WAT . F 3 HOH B 12 184 26 HOH WAT . F 3 HOH B 13 185 28 HOH WAT . F 3 HOH B 14 186 29 HOH WAT . F 3 HOH B 15 187 30 HOH WAT . F 3 HOH B 16 188 32 HOH WAT . F 3 HOH B 17 189 37 HOH WAT . F 3 HOH B 18 190 38 HOH WAT . F 3 HOH B 19 191 40 HOH WAT . F 3 HOH B 20 192 41 HOH WAT . F 3 HOH B 21 193 44 HOH WAT . F 3 HOH B 22 194 47 HOH WAT . F 3 HOH B 23 195 51 HOH WAT . F 3 HOH B 24 196 52 HOH WAT . F 3 HOH B 25 197 53 HOH WAT . F 3 HOH B 26 198 54 HOH WAT . F 3 HOH B 27 199 55 HOH WAT . F 3 HOH B 28 200 56 HOH WAT . F 3 HOH B 29 201 57 HOH WAT . F 3 HOH B 30 202 58 HOH WAT . F 3 HOH B 31 203 62 HOH WAT . F 3 HOH B 32 204 63 HOH WAT . F 3 HOH B 33 205 68 HOH WAT . F 3 HOH B 34 206 70 HOH WAT . F 3 HOH B 35 207 73 HOH WAT . F 3 HOH B 36 208 74 HOH WAT . F 3 HOH B 37 209 76 HOH WAT . F 3 HOH B 38 210 77 HOH WAT . F 3 HOH B 39 211 81 HOH WAT . F 3 HOH B 40 212 82 HOH WAT . F 3 HOH B 41 213 84 HOH WAT . F 3 HOH B 42 214 85 HOH WAT . F 3 HOH B 43 215 87 HOH WAT . F 3 HOH B 44 216 89 HOH WAT . F 3 HOH B 45 217 90 HOH WAT . F 3 HOH B 46 218 91 HOH WAT . F 3 HOH B 47 219 92 HOH WAT . F 3 HOH B 48 220 97 HOH WAT . F 3 HOH B 49 221 99 HOH WAT . F 3 HOH B 50 222 102 HOH WAT . F 3 HOH B 51 223 105 HOH WAT . F 3 HOH B 52 224 108 HOH WAT . F 3 HOH B 53 225 109 HOH WAT . F 3 HOH B 54 226 110 HOH WAT . F 3 HOH B 55 227 113 HOH WAT . F 3 HOH B 56 228 116 HOH WAT . F 3 HOH B 57 229 117 HOH WAT . F 3 HOH B 58 230 119 HOH WAT . F 3 HOH B 59 231 121 HOH WAT . F 3 HOH B 60 232 125 HOH WAT . F 3 HOH B 61 233 127 HOH WAT . F 3 HOH B 62 234 129 HOH WAT . F 3 HOH B 63 235 131 HOH WAT . F 3 HOH B 64 236 134 HOH WAT . F 3 HOH B 65 237 135 HOH WAT . F 3 HOH B 66 238 136 HOH WAT . F 3 HOH B 67 239 139 HOH WAT . F 3 HOH B 68 240 141 HOH WAT . F 3 HOH B 69 241 143 HOH WAT . F 3 HOH B 70 242 145 HOH WAT . F 3 HOH B 71 243 146 HOH WAT . F 3 HOH B 72 244 147 HOH WAT . F 3 HOH B 73 245 149 HOH WAT . F 3 HOH B 74 246 150 HOH WAT . F 3 HOH B 75 247 154 HOH WAT . F 3 HOH B 76 248 155 HOH WAT . F 3 HOH B 77 249 156 HOH WAT . F 3 HOH B 78 250 158 HOH WAT . F 3 HOH B 79 251 162 HOH WAT . F 3 HOH B 80 252 164 HOH WAT . F 3 HOH B 81 253 166 HOH WAT . F 3 HOH B 82 254 167 HOH WAT . F 3 HOH B 83 255 168 HOH WAT . F 3 HOH B 84 256 169 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S1 DTT . . . D 2 26.752 11.743 39.691 1 49.33 ? S1 DTT 172 B 1 HETATM 2 C C1 DTT . . . D 2 27.416 13.011 40.744 1 41.64 ? C1 DTT 172 B 1 HETATM 3 C C2 DTT . . . D 2 27.437 14.029 39.712 1 38.7 ? C2 DTT 172 B 1 HETATM 4 O O2 DTT . . . D 2 26.488 14.582 39.828 1 39.15 ? O2 DTT 172 B 1 HETATM 5 C C3 DTT . . . D 2 28.681 14.768 39.705 1 36.19 ? C3 DTT 172 B 1 HETATM 6 O O3 DTT . . . D 2 28.424 15.936 40.375 1 34.53 ? O3 DTT 172 B 1 HETATM 7 C C4 DTT . . . D 2 29.202 15.14 38.452 1 35.63 ? C4 DTT 172 B 1 HETATM 8 S S4 DTT . . . D 2 30.8 15.105 39.108 1 37.32 ? S4 DTT 172 B 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 548 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 8 #