data_1N3N # _model_server_result.job_id u0aOviX6XTOeAzI88WVK9g _model_server_result.datetime_utc '2024-12-26 16:49:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1n3n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":281}' # _entry.id 1N3N # _exptl.entry_id 1N3N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.01 _cell.angle_gamma 90 _cell.entry_id 1N3N _cell.length_a 129.276 _cell.length_b 122.995 _cell.length_c 150.833 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1N3N _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 PISA trimeric 3 author_and_software_defined_assembly 3 PISA trimeric 3 author_and_software_defined_assembly 4 PISA hexameric 6 software_defined_assembly 5 PISA hexameric 6 software_defined_assembly 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,I,O,P,W 1 1 G,H,L,N,U,V,Y 2 1 E,F,K,M,S,T,X 3 1 C,D,J,Q,R 4 1 G,H,L,N,U,V,Y 5 1 C,D,J,Q,R 5 2 E,F,K,M,S,T,X 6 1 A,B,I,O,P,W 6 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 129.249675 0 150.832998 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 M N N ? 4 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 101 A CYS 101 1_555 A SG CYS 164 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf2 A SG CYS 203 A CYS 203 1_555 A SG CYS 259 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf3 B SG CYS 25 B CYS 25 1_555 B SG CYS 80 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf4 C SG CYS 101 C CYS 101 1_555 C SG CYS 164 C CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? disulf ? disulf5 C SG CYS 203 C CYS 203 1_555 C SG CYS 259 C CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf6 D SG CYS 25 D CYS 25 1_555 D SG CYS 80 D CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf7 E SG CYS 101 E CYS 101 1_555 E SG CYS 164 E CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf8 E SG CYS 203 E CYS 203 1_555 E SG CYS 259 E CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf9 F SG CYS 25 F CYS 25 1_555 F SG CYS 80 F CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf10 G SG CYS 101 G CYS 101 1_555 G SG CYS 164 G CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf11 G SG CYS 203 G CYS 203 1_555 G SG CYS 259 G CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf12 H SG CYS 25 H CYS 25 1_555 H SG CYS 80 H CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 1N3N _atom_sites.fract_transf_matrix[1][1] 0.007735 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00813 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00663 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 4 SO4 E 1 281 1 SO4 SO4 . N 4 SO4 G 1 281 2 SO4 SO4 . O 5 HOH A 1 281 9 HOH HOH . O 5 HOH A 2 282 11 HOH HOH . O 5 HOH A 3 283 19 HOH HOH . O 5 HOH A 4 284 41 HOH HOH . O 5 HOH A 5 285 43 HOH HOH . O 5 HOH A 6 286 45 HOH HOH . O 5 HOH A 7 287 49 HOH HOH . O 5 HOH A 8 288 53 HOH HOH . O 5 HOH A 9 289 62 HOH HOH . O 5 HOH A 10 290 66 HOH HOH . O 5 HOH A 11 291 79 HOH HOH . O 5 HOH A 12 292 80 HOH HOH . O 5 HOH A 13 293 83 HOH HOH . O 5 HOH A 14 294 88 HOH HOH . O 5 HOH A 15 295 90 HOH HOH . O 5 HOH A 16 296 94 HOH HOH . O 5 HOH A 17 297 99 HOH HOH . O 5 HOH A 18 298 107 HOH HOH . O 5 HOH A 19 299 109 HOH HOH . O 5 HOH A 20 300 127 HOH HOH . O 5 HOH A 21 301 130 HOH HOH . O 5 HOH A 22 302 142 HOH HOH . O 5 HOH A 23 303 146 HOH HOH . O 5 HOH A 24 304 165 HOH HOH . O 5 HOH A 25 305 170 HOH HOH . O 5 HOH A 26 306 171 HOH HOH . O 5 HOH A 27 307 178 HOH HOH . O 5 HOH A 28 308 187 HOH HOH . P 5 HOH B 1 100 6 HOH HOH . P 5 HOH B 2 101 20 HOH HOH . P 5 HOH B 3 102 28 HOH HOH . P 5 HOH B 4 103 32 HOH HOH . P 5 HOH B 5 104 33 HOH HOH . P 5 HOH B 6 105 38 HOH HOH . P 5 HOH B 7 106 47 HOH HOH . P 5 HOH B 8 107 57 HOH HOH . P 5 HOH B 9 108 75 HOH HOH . P 5 HOH B 10 109 81 HOH HOH . P 5 HOH B 11 110 104 HOH HOH . P 5 HOH B 12 111 118 HOH HOH . P 5 HOH B 13 112 124 HOH HOH . P 5 HOH B 14 113 133 HOH HOH . P 5 HOH B 15 114 153 HOH HOH . P 5 HOH B 16 115 158 HOH HOH . P 5 HOH B 17 116 166 HOH HOH . P 5 HOH B 18 117 179 HOH HOH . P 5 HOH B 19 118 181 HOH HOH . P 5 HOH B 20 119 185 HOH HOH . Q 5 HOH C 1 281 3 HOH HOH . Q 5 HOH C 2 282 5 HOH HOH . Q 5 HOH C 3 283 12 HOH HOH . Q 5 HOH C 4 284 14 HOH HOH . Q 5 HOH C 5 285 16 HOH HOH . Q 5 HOH C 6 286 24 HOH HOH . Q 5 HOH C 7 287 25 HOH HOH . Q 5 HOH C 8 288 35 HOH HOH . Q 5 HOH C 9 289 40 HOH HOH . Q 5 HOH C 10 290 42 HOH HOH . Q 5 HOH C 11 291 44 HOH HOH . Q 5 HOH C 12 292 52 HOH HOH . Q 5 HOH C 13 293 54 HOH HOH . Q 5 HOH C 14 294 69 HOH HOH . Q 5 HOH C 15 295 70 HOH HOH . Q 5 HOH C 16 296 72 HOH HOH . Q 5 HOH C 17 297 74 HOH HOH . Q 5 HOH C 18 298 78 HOH HOH . Q 5 HOH C 19 299 82 HOH HOH . Q 5 HOH C 20 300 85 HOH HOH . Q 5 HOH C 21 301 95 HOH HOH . Q 5 HOH C 22 302 106 HOH HOH . Q 5 HOH C 23 303 108 HOH HOH . Q 5 HOH C 24 304 111 HOH HOH . Q 5 HOH C 25 305 119 HOH HOH . Q 5 HOH C 26 306 159 HOH HOH . Q 5 HOH C 27 307 162 HOH HOH . Q 5 HOH C 28 308 168 HOH HOH . Q 5 HOH C 29 309 176 HOH HOH . Q 5 HOH C 30 310 177 HOH HOH . R 5 HOH D 1 100 10 HOH HOH . R 5 HOH D 2 101 18 HOH HOH . R 5 HOH D 3 102 58 HOH HOH . R 5 HOH D 4 103 61 HOH HOH . R 5 HOH D 5 104 77 HOH HOH . R 5 HOH D 6 105 89 HOH HOH . R 5 HOH D 7 106 97 HOH HOH . R 5 HOH D 8 107 98 HOH HOH . R 5 HOH D 9 108 112 HOH HOH . R 5 HOH D 10 109 113 HOH HOH . R 5 HOH D 11 110 139 HOH HOH . R 5 HOH D 12 111 144 HOH HOH . R 5 HOH D 13 112 160 HOH HOH . R 5 HOH D 14 113 183 HOH HOH . S 5 HOH E 1 282 7 HOH HOH . S 5 HOH E 2 283 13 HOH HOH . S 5 HOH E 3 284 17 HOH HOH . S 5 HOH E 4 285 22 HOH HOH . S 5 HOH E 5 286 27 HOH HOH . S 5 HOH E 6 287 37 HOH HOH . S 5 HOH E 7 288 46 HOH HOH . S 5 HOH E 8 289 48 HOH HOH . S 5 HOH E 9 290 51 HOH HOH . S 5 HOH E 10 291 55 HOH HOH . S 5 HOH E 11 292 56 HOH HOH . S 5 HOH E 12 293 63 HOH HOH . S 5 HOH E 13 294 65 HOH HOH . S 5 HOH E 14 295 67 HOH HOH . S 5 HOH E 15 296 68 HOH HOH . S 5 HOH E 16 297 91 HOH HOH . S 5 HOH E 17 298 92 HOH HOH . S 5 HOH E 18 299 100 HOH HOH . S 5 HOH E 19 300 103 HOH HOH . S 5 HOH E 20 301 115 HOH HOH . S 5 HOH E 21 302 125 HOH HOH . S 5 HOH E 22 303 134 HOH HOH . S 5 HOH E 23 304 137 HOH HOH . S 5 HOH E 24 305 140 HOH HOH . S 5 HOH E 25 306 141 HOH HOH . S 5 HOH E 26 307 143 HOH HOH . S 5 HOH E 27 308 149 HOH HOH . S 5 HOH E 28 309 151 HOH HOH . S 5 HOH E 29 310 155 HOH HOH . S 5 HOH E 30 311 173 HOH HOH . S 5 HOH E 31 312 180 HOH HOH . S 5 HOH E 32 313 188 HOH HOH . S 5 HOH E 33 314 189 HOH HOH . T 5 HOH F 1 100 15 HOH HOH . T 5 HOH F 2 101 23 HOH HOH . T 5 HOH F 3 102 29 HOH HOH . T 5 HOH F 4 103 34 HOH HOH . T 5 HOH F 5 104 60 HOH HOH . T 5 HOH F 6 105 86 HOH HOH . T 5 HOH F 7 106 110 HOH HOH . T 5 HOH F 8 107 114 HOH HOH . T 5 HOH F 9 108 116 HOH HOH . T 5 HOH F 10 109 117 HOH HOH . T 5 HOH F 11 110 120 HOH HOH . T 5 HOH F 12 111 121 HOH HOH . T 5 HOH F 13 112 123 HOH HOH . T 5 HOH F 14 113 128 HOH HOH . T 5 HOH F 15 114 129 HOH HOH . T 5 HOH F 16 115 131 HOH HOH . T 5 HOH F 17 116 161 HOH HOH . T 5 HOH F 18 117 164 HOH HOH . T 5 HOH F 19 118 169 HOH HOH . T 5 HOH F 20 119 174 HOH HOH . U 5 HOH G 1 282 1 HOH HOH . U 5 HOH G 2 283 4 HOH HOH . U 5 HOH G 3 284 8 HOH HOH . U 5 HOH G 4 285 21 HOH HOH . U 5 HOH G 5 286 26 HOH HOH . U 5 HOH G 6 287 31 HOH HOH . U 5 HOH G 7 288 39 HOH HOH . U 5 HOH G 8 289 50 HOH HOH . U 5 HOH G 9 290 59 HOH HOH . U 5 HOH G 10 291 73 HOH HOH . U 5 HOH G 11 292 87 HOH HOH . U 5 HOH G 12 293 93 HOH HOH . U 5 HOH G 13 294 96 HOH HOH . U 5 HOH G 14 295 101 HOH HOH . U 5 HOH G 15 296 102 HOH HOH . U 5 HOH G 16 297 105 HOH HOH . U 5 HOH G 17 298 122 HOH HOH . U 5 HOH G 18 299 132 HOH HOH . U 5 HOH G 19 300 138 HOH HOH . U 5 HOH G 20 301 150 HOH HOH . U 5 HOH G 21 302 152 HOH HOH . U 5 HOH G 22 303 154 HOH HOH . U 5 HOH G 23 304 157 HOH HOH . U 5 HOH G 24 305 167 HOH HOH . U 5 HOH G 25 306 172 HOH HOH . U 5 HOH G 26 307 175 HOH HOH . U 5 HOH G 27 308 182 HOH HOH . U 5 HOH G 28 309 186 HOH HOH . V 5 HOH H 1 100 30 HOH HOH . V 5 HOH H 2 101 36 HOH HOH . V 5 HOH H 3 102 64 HOH HOH . V 5 HOH H 4 103 76 HOH HOH . V 5 HOH H 5 104 156 HOH HOH . V 5 HOH H 6 105 163 HOH HOH . W 5 HOH I 1 11 2 HOH HOH . X 5 HOH K 1 71 71 HOH HOH . X 5 HOH K 2 135 135 HOH HOH . X 5 HOH K 3 145 145 HOH HOH . X 5 HOH K 4 148 148 HOH HOH . X 5 HOH K 5 184 184 HOH HOH . Y 5 HOH L 1 84 84 HOH HOH . Y 5 HOH L 2 126 126 HOH HOH . Y 5 HOH L 3 136 136 HOH HOH . Y 5 HOH L 4 147 147 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . M 4 38.665 0.45 111.801 1 83.26 ? S SO4 281 E 1 HETATM 2 O O1 SO4 . . . M 4 39.958 0.447 111.094 1 83.46 ? O1 SO4 281 E 1 HETATM 3 O O2 SO4 . . . M 4 37.936 -0.794 111.496 1 83.63 ? O2 SO4 281 E 1 HETATM 4 O O3 SO4 . . . M 4 38.902 0.543 113.256 1 81.91 ? O3 SO4 281 E 1 HETATM 5 O O4 SO4 . . . M 4 37.881 1.613 111.344 1 82.87 ? O4 SO4 281 E 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 337 _model_server_stats.encode_time_ms 24 _model_server_stats.element_count 5 #