data_1N3T
#
_model_server_result.job_id            hsnEjXibndPEFFGPzupOeg 
_model_server_result.datetime_utc      '2024-10-10 08:24:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1n3t 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"W","auth_seq_id":417}' 
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_entry.id    1N3T 
#
_exptl.entry_id    1N3T 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              523.18 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "GUANOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    15 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1N3T 
_cell.length_a            223.14 
_cell.length_b            317.81 
_cell.length_c            132.15 
_cell.Z_PDB               120 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1N3T 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA decameric 10 author_and_software_defined_assembly 1 
PISA decameric 10 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,P,Q,R,S,T,U,V,W,X,Y 1 1 
K,L,M,N,O,Z,AA,BA,CA,DA 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_556 x,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 132.15 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 P N N 
? 2 Q N N 
? 2 R N N 
? 2 S N N 
? 2 T N N 
? 2 U N N 
? 2 V N N 
? 2 W N N 
? 2 X N N 
? 2 Y N N 
? 2 Z N N 
? 2 AA N N 
? 2 BA N N 
? 2 CA N N 
? 2 DA N N 
#
_chem_comp.formula           'C10 H16 N5 O14 P3' 
_chem_comp.formula_weight    523.18 
_chem_comp.id                GTP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              "GUANOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G GTP doub 129 n n 
PG O2G GTP sing 130 n n 
PG O3G GTP sing 131 n n 
PG O3B GTP sing 132 n n 
O2G HOG2 GTP sing 133 n n 
O3G HOG3 GTP sing 134 n n 
O3B PB GTP sing 135 n n 
PB O1B GTP doub 136 n n 
PB O2B GTP sing 137 n n 
PB O3A GTP sing 138 n n 
O2B HOB2 GTP sing 139 n n 
O3A PA GTP sing 140 n n 
PA O1A GTP doub 141 n n 
PA O2A GTP sing 142 n n 
PA O5' GTP sing 143 n n 
O2A HOA2 GTP sing 144 n n 
O5' C5' GTP sing 145 n n 
C5' C4' GTP sing 146 n n 
C5' H5' GTP sing 147 n n 
C5' "H5''" GTP sing 148 n n 
C4' O4' GTP sing 149 n n 
C4' C3' GTP sing 150 n n 
C4' H4' GTP sing 151 n n 
O4' C1' GTP sing 152 n n 
C3' O3' GTP sing 153 n n 
C3' C2' GTP sing 154 n n 
C3' H3' GTP sing 155 n n 
O3' HO3' GTP sing 156 n n 
C2' O2' GTP sing 157 n n 
C2' C1' GTP sing 158 n n 
C2' H2' GTP sing 159 n n 
O2' HO2' GTP sing 160 n n 
C1' N9 GTP sing 161 n n 
C1' H1' GTP sing 162 n n 
N9 C8 GTP sing 163 n y 
N9 C4 GTP sing 164 n y 
C8 N7 GTP doub 165 n y 
C8 H8 GTP sing 166 n n 
N7 C5 GTP sing 167 n y 
C5 C6 GTP sing 168 n n 
C5 C4 GTP doub 169 n y 
C6 O6 GTP doub 170 n n 
C6 N1 GTP sing 171 n n 
N1 C2 GTP sing 172 n n 
N1 HN1 GTP sing 173 n n 
C2 N2 GTP sing 174 n n 
C2 N3 GTP doub 175 n n 
N2 HN21 GTP sing 176 n n 
N2 HN22 GTP sing 177 n n 
N3 C4 GTP sing 178 n n 
#
_atom_sites.entry_id                     1N3T 
_atom_sites.fract_transf_matrix[1][1]    0.004481 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.003147 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007567 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
P 2 GTP F 1 415 411 GTP GTP . 
Q 2 GTP G 1 411 411 GTP GTP . 
R 2 GTP H 1 412 411 GTP GTP . 
S 2 GTP I 1 413 411 GTP GTP . 
T 2 GTP J 1 414 411 GTP GTP . 
U 2 GTP K 1 420 411 GTP GTP . 
V 2 GTP L 1 416 411 GTP GTP . 
W 2 GTP M 1 417 411 GTP GTP . 
X 2 GTP N 1 418 411 GTP GTP . 
Y 2 GTP O 1 419 411 GTP GTP . 
Z 2 GTP A 1 425 411 GTP GTP . 
AA 2 GTP B 1 421 411 GTP GTP . 
BA 2 GTP C 1 422 411 GTP GTP . 
CA 2 GTP D 1 423 411 GTP GTP . 
DA 2 GTP E 1 424 411 GTP GTP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG GTP . . . W 2 52.686 126.761 17.669 1 42.47 ? PG GTP 417 M 1 
HETATM 2 O O1G GTP . . . W 2 53.715 127.009 16.59 1 41.88 ? O1G GTP 417 M 1 
HETATM 3 O O2G GTP . . . W 2 52.972 125.586 18.604 1 42.62 ? O2G GTP 417 M 1 
HETATM 4 O O3G GTP . . . W 2 51.372 126.688 17.065 1 42.15 ? O3G GTP 417 M 1 
HETATM 5 O O3B GTP . . . W 2 52.693 128.141 18.545 1 43.13 ? O3B GTP 417 M 1 
HETATM 6 P PB GTP . . . W 2 53.123 129.734 18.283 1 42.96 ? PB GTP 417 M 1 
HETATM 7 O O1B GTP . . . W 2 54.523 129.807 17.637 1 40.7 ? O1B GTP 417 M 1 
HETATM 8 O O2B GTP . . . W 2 52.052 130.428 17.531 1 41.24 ? O2B GTP 417 M 1 
HETATM 9 O O3A GTP . . . W 2 53.087 130.079 19.796 1 41.54 ? O3A GTP 417 M 1 
HETATM 10 P PA GTP . . . W 2 52.119 131.006 20.685 1 42.79 ? PA GTP 417 M 1 
HETATM 11 O O1A GTP . . . W 2 52.728 131.188 21.986 1 42.34 ? O1A GTP 417 M 1 
HETATM 12 O O2A GTP . . . W 2 51.825 132.252 19.841 1 42.93 ? O2A GTP 417 M 1 
HETATM 13 O O5' GTP . . . W 2 50.763 130.078 20.987 1 39.37 ? O5' GTP 417 M 1 
HETATM 14 C C5' GTP . . . W 2 49.906 129.768 19.806 1 34.93 ? C5' GTP 417 M 1 
HETATM 15 C C4' GTP . . . W 2 49.001 128.745 20.643 1 33.92 ? C4' GTP 417 M 1 
HETATM 16 O O4' GTP . . . W 2 47.557 129.006 20.776 1 32.37 ? O4' GTP 417 M 1 
HETATM 17 C C3' GTP . . . W 2 49.068 127.35 20.244 1 34.12 ? C3' GTP 417 M 1 
HETATM 18 O O3' GTP . . . W 2 49.254 126.492 21.338 1 34.77 ? O3' GTP 417 M 1 
HETATM 19 C C2' GTP . . . W 2 47.78 127.064 19.413 1 33.75 ? C2' GTP 417 M 1 
HETATM 20 O O2' GTP . . . W 2 47.519 125.789 19.208 1 35.97 ? O2' GTP 417 M 1 
HETATM 21 C C1' GTP . . . W 2 46.827 127.8 20.539 1 30.28 ? C1' GTP 417 M 1 
HETATM 22 N N9 GTP . . . W 2 45.442 128.032 20.006 1 25.1 ? N9 GTP 417 M 1 
HETATM 23 C C8 GTP . . . W 2 45.126 128.506 18.737 1 24.71 ? C8 GTP 417 M 1 
HETATM 24 N N7 GTP . . . W 2 43.777 128.475 18.866 1 24.64 ? N7 GTP 417 M 1 
HETATM 25 C C5 GTP . . . W 2 43.301 128.017 20.095 1 22.94 ? C5 GTP 417 M 1 
HETATM 26 C C6 GTP . . . W 2 42.09 127.887 20.5 1 22.93 ? C6 GTP 417 M 1 
HETATM 27 O O6 GTP . . . W 2 40.915 128.047 20.087 1 23.78 ? O6 GTP 417 M 1 
HETATM 28 N N1 GTP . . . W 2 42.039 127.349 21.934 1 21.35 ? N1 GTP 417 M 1 
HETATM 29 C C2 GTP . . . W 2 43.185 127.132 22.483 1 21.39 ? C2 GTP 417 M 1 
HETATM 30 N N2 GTP . . . W 2 43.109 126.613 23.889 1 24.33 ? N2 GTP 417 M 1 
HETATM 31 N N3 GTP . . . W 2 44.447 127.278 22.059 1 20.88 ? N3 GTP 417 M 1 
HETATM 32 C C4 GTP . . . W 2 44.383 127.75 20.774 1 22.74 ? C4 GTP 417 M 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           245 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           32 
#