data_1N46 # _model_server_result.job_id LiImJw6WjrxM3FdI1INJbw _model_server_result.datetime_utc '2025-02-28 15:00:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1n46 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":462}' # _entry.id 1N46 # _exptl.entry_id 1N46 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 367.398 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[4-(4-HYDROXY-3-ISOPROPYL-PHENOXY)-3,5-DIMETHYL-PHENYL]-6-AZAURACIL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.19 _cell.angle_gamma 90 _cell.entry_id 1N46 _cell.length_a 42.918 _cell.length_b 105.315 _cell.length_c 55.988 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1N46 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C20 H21 N3 O4' _chem_comp.formula_weight 367.398 _chem_comp.id PFA _chem_comp.mon_nstd_flag . _chem_comp.name '[4-(4-HYDROXY-3-ISOPROPYL-PHENOXY)-3,5-DIMETHYL-PHENYL]-6-AZAURACIL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 2-[4-(4-HYDROXY-3-ISOPROPYL-PHENOXY)-3,5-DIMETHYL-PHENYL]-2H-[1,2,4]TRIAZINE-3,5-DIONE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O9 C14 PFA doub 237 n n C14 N6 PFA sing 238 n n C14 N5 PFA sing 239 n n N6 C10 PFA sing 240 n n N6 HN6 PFA sing 241 n n C10 O8 PFA doub 242 n n C10 C17 PFA sing 243 n n N5 N3 PFA sing 244 n n N5 C4 PFA sing 245 n n N3 C17 PFA doub 246 n n C17 H17C PFA sing 247 n n C4 C5 PFA doub 248 n y C4 C3 PFA sing 249 n y C5 C6 PFA sing 250 n y C5 HC5 PFA sing 251 n n C6 C7 PFA sing 252 n n C6 C1 PFA doub 253 n y C7 HC71 PFA sing 254 n n C7 HC72 PFA sing 255 n n C7 HC73 PFA sing 256 n n C3 C2 PFA doub 257 n y C3 HC3 PFA sing 258 n n C2 C19 PFA sing 259 n n C2 C1 PFA sing 260 n y C19 H191 PFA sing 261 n n C19 H192 PFA sing 262 n n C19 H193 PFA sing 263 n n C1 O20 PFA sing 264 n n O20 C21 PFA sing 265 n n C21 C31 PFA doub 266 n y C21 C22 PFA sing 267 n y C31 C29 PFA sing 268 n y C31 H31C PFA sing 269 n n C22 C24 PFA doub 270 n y C22 H22C PFA sing 271 n n C24 C25 PFA sing 272 n n C24 C26 PFA sing 273 n y C25 C8 PFA sing 274 n n C25 C9 PFA sing 275 n n C25 H25C PFA sing 276 n n C8 HC81 PFA sing 277 n n C8 HC82 PFA sing 278 n n C8 HC83 PFA sing 279 n n C9 HC91 PFA sing 280 n n C9 HC92 PFA sing 281 n n C9 HC93 PFA sing 282 n n C26 C29 PFA doub 283 n y C26 O27 PFA sing 284 n n C29 H29C PFA sing 285 n n O27 H27O PFA sing 286 n n # _atom_sites.entry_id 1N46 _atom_sites.fract_transf_matrix[1][1] 0.0233 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003355 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009495 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018045 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PFA A 1 462 1 PFA PFE . D 2 PFA B 1 463 1 PFA PFE . E 3 HOH A 1 1 1 HOH HOH . E 3 HOH A 2 2 2 HOH HOH . E 3 HOH A 3 3 3 HOH HOH . E 3 HOH A 4 4 4 HOH HOH . E 3 HOH A 5 5 5 HOH HOH . E 3 HOH A 6 6 6 HOH HOH . E 3 HOH A 7 7 7 HOH HOH . E 3 HOH A 8 9 9 HOH HOH . E 3 HOH A 9 10 10 HOH HOH . E 3 HOH A 10 11 11 HOH HOH . E 3 HOH A 11 12 12 HOH HOH . E 3 HOH A 12 16 16 HOH HOH . E 3 HOH A 13 17 17 HOH HOH . E 3 HOH A 14 18 18 HOH HOH . E 3 HOH A 15 19 19 HOH HOH . E 3 HOH A 16 21 21 HOH HOH . E 3 HOH A 17 22 22 HOH HOH . E 3 HOH A 18 25 25 HOH HOH . E 3 HOH A 19 26 26 HOH HOH . E 3 HOH A 20 28 28 HOH HOH . E 3 HOH A 21 29 29 HOH HOH . E 3 HOH A 22 30 30 HOH HOH . E 3 HOH A 23 31 31 HOH HOH . E 3 HOH A 24 32 32 HOH HOH . E 3 HOH A 25 33 33 HOH HOH . E 3 HOH A 26 34 34 HOH HOH . E 3 HOH A 27 35 35 HOH HOH . E 3 HOH A 28 37 37 HOH HOH . E 3 HOH A 29 38 38 HOH HOH . E 3 HOH A 30 40 40 HOH HOH . E 3 HOH A 31 41 41 HOH HOH . E 3 HOH A 32 42 42 HOH HOH . E 3 HOH A 33 43 43 HOH HOH . E 3 HOH A 34 44 44 HOH HOH . E 3 HOH A 35 45 45 HOH HOH . E 3 HOH A 36 46 46 HOH HOH . E 3 HOH A 37 47 47 HOH HOH . E 3 HOH A 38 48 48 HOH HOH . E 3 HOH A 39 50 50 HOH HOH . E 3 HOH A 40 54 54 HOH HOH . E 3 HOH A 41 55 55 HOH HOH . E 3 HOH A 42 56 56 HOH HOH . E 3 HOH A 43 57 57 HOH HOH . E 3 HOH A 44 58 58 HOH HOH . E 3 HOH A 45 63 63 HOH HOH . E 3 HOH A 46 64 64 HOH HOH . E 3 HOH A 47 65 65 HOH HOH . E 3 HOH A 48 66 66 HOH HOH . E 3 HOH A 49 67 67 HOH HOH . E 3 HOH A 50 68 68 HOH HOH . E 3 HOH A 51 69 69 HOH HOH . E 3 HOH A 52 70 70 HOH HOH . E 3 HOH A 53 71 71 HOH HOH . E 3 HOH A 54 72 72 HOH HOH . E 3 HOH A 55 73 73 HOH HOH . E 3 HOH A 56 74 74 HOH HOH . E 3 HOH A 57 75 75 HOH HOH . E 3 HOH A 58 78 78 HOH HOH . E 3 HOH A 59 82 82 HOH HOH . E 3 HOH A 60 84 84 HOH HOH . E 3 HOH A 61 85 85 HOH HOH . E 3 HOH A 62 87 87 HOH HOH . E 3 HOH A 63 88 88 HOH HOH . E 3 HOH A 64 90 90 HOH HOH . E 3 HOH A 65 92 92 HOH HOH . E 3 HOH A 66 93 93 HOH HOH . E 3 HOH A 67 94 94 HOH HOH . E 3 HOH A 68 95 95 HOH HOH . E 3 HOH A 69 97 97 HOH HOH . E 3 HOH A 70 98 98 HOH HOH . E 3 HOH A 71 99 99 HOH HOH . E 3 HOH A 72 100 100 HOH HOH . E 3 HOH A 73 101 101 HOH HOH . E 3 HOH A 74 102 102 HOH HOH . E 3 HOH A 75 103 103 HOH HOH . E 3 HOH A 76 104 104 HOH HOH . E 3 HOH A 77 106 106 HOH HOH . E 3 HOH A 78 107 107 HOH HOH . E 3 HOH A 79 108 108 HOH HOH . E 3 HOH A 80 109 109 HOH HOH . E 3 HOH A 81 110 110 HOH HOH . E 3 HOH A 82 113 113 HOH HOH . E 3 HOH A 83 114 114 HOH HOH . E 3 HOH A 84 115 115 HOH HOH . E 3 HOH A 85 117 117 HOH HOH . F 3 HOH B 1 8 8 HOH HOH . F 3 HOH B 2 13 13 HOH HOH . F 3 HOH B 3 14 14 HOH HOH . F 3 HOH B 4 15 15 HOH HOH . F 3 HOH B 5 20 20 HOH HOH . F 3 HOH B 6 23 23 HOH HOH . F 3 HOH B 7 24 24 HOH HOH . F 3 HOH B 8 27 27 HOH HOH . F 3 HOH B 9 36 36 HOH HOH . F 3 HOH B 10 39 39 HOH HOH . F 3 HOH B 11 49 49 HOH HOH . F 3 HOH B 12 51 51 HOH HOH . F 3 HOH B 13 52 52 HOH HOH . F 3 HOH B 14 53 53 HOH HOH . F 3 HOH B 15 59 59 HOH HOH . F 3 HOH B 16 60 60 HOH HOH . F 3 HOH B 17 61 61 HOH HOH . F 3 HOH B 18 62 62 HOH HOH . F 3 HOH B 19 76 76 HOH HOH . F 3 HOH B 20 77 77 HOH HOH . F 3 HOH B 21 79 79 HOH HOH . F 3 HOH B 22 80 80 HOH HOH . F 3 HOH B 23 83 83 HOH HOH . F 3 HOH B 24 86 86 HOH HOH . F 3 HOH B 25 91 91 HOH HOH . F 3 HOH B 26 96 96 HOH HOH . F 3 HOH B 27 105 105 HOH HOH . F 3 HOH B 28 111 111 HOH HOH . F 3 HOH B 29 116 116 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O9 PFA . . . C 2 17.223 5.255 6.139 1 17.72 ? O9 PFA 462 A 1 HETATM 2 C C14 PFA . . . C 2 18.023 4.377 6.268 1 17.29 ? C14 PFA 462 A 1 HETATM 3 N N6 PFA . . . C 2 17.977 3.356 7.189 1 17.11 ? N6 PFA 462 A 1 HETATM 4 C C10 PFA . . . C 2 18.947 2.397 7.246 1 14.56 ? C10 PFA 462 A 1 HETATM 5 O O8 PFA . . . C 2 18.955 1.489 8.047 1 16.66 ? O8 PFA 462 A 1 HETATM 6 N N5 PFA . . . C 2 19.023 4.41 5.4 1 17 ? N5 PFA 462 A 1 HETATM 7 N N3 PFA . . . C 2 20.032 3.413 5.406 1 16.79 ? N3 PFA 462 A 1 HETATM 8 C C17 PFA . . . C 2 20.019 2.446 6.252 1 11.13 ? C17 PFA 462 A 1 HETATM 9 C C4 PFA . . . C 2 19.299 5.407 4.443 1 15.11 ? C4 PFA 462 A 1 HETATM 10 C C5 PFA . . . C 2 20.493 6.176 4.753 1 16.98 ? C5 PFA 462 A 1 HETATM 11 C C6 PFA . . . C 2 20.859 7.233 3.877 1 16.48 ? C6 PFA 462 A 1 HETATM 12 C C7 PFA . . . C 2 22.04 8.059 4.115 1 15.65 ? C7 PFA 462 A 1 HETATM 13 C C3 PFA . . . C 2 18.553 5.719 3.321 1 13.85 ? C3 PFA 462 A 1 HETATM 14 C C2 PFA . . . C 2 18.956 6.702 2.397 1 14.62 ? C2 PFA 462 A 1 HETATM 15 C C19 PFA . . . C 2 18.088 7.02 1.162 1 11.58 ? C19 PFA 462 A 1 HETATM 16 C C1 PFA . . . C 2 20.103 7.482 2.696 1 15.13 ? C1 PFA 462 A 1 HETATM 17 O O20 PFA . . . C 2 20.38 8.504 1.813 1 15.24 ? O20 PFA 462 A 1 HETATM 18 C C21 PFA . . . C 2 21.419 8.339 0.91 1 18.5 ? C21 PFA 462 A 1 HETATM 19 C C31 PFA . . . C 2 21.68 7.075 0.261 1 10.96 ? C31 PFA 462 A 1 HETATM 20 C C22 PFA . . . C 2 22.22 9.512 0.664 1 16.75 ? C22 PFA 462 A 1 HETATM 21 C C24 PFA . . . C 2 23.295 9.425 -0.257 1 19.54 ? C24 PFA 462 A 1 HETATM 22 C C25 PFA . . . C 2 24.211 10.646 -0.504 1 19.88 ? C25 PFA 462 A 1 HETATM 23 C C8 PFA . . . C 2 23.293 11.889 -0.716 1 18.22 ? C8 PFA 462 A 1 HETATM 24 C C9 PFA . . . C 2 25.097 10.78 0.76 1 18.2 ? C9 PFA 462 A 1 HETATM 25 C C26 PFA . . . C 2 23.583 8.175 -0.855 1 14.31 ? C26 PFA 462 A 1 HETATM 26 C C29 PFA . . . C 2 22.756 7.045 -0.637 1 12.55 ? C29 PFA 462 A 1 HETATM 27 O O27 PFA . . . C 2 24.637 8.036 -1.731 1 18.31 ? O27 PFA 462 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 1344 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 27 #