data_1N4H # _model_server_result.job_id yDDkxFx5EWZa_JCjJQckcg _model_server_result.datetime_utc '2025-08-31 10:53:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1n4h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":500}' # _entry.id 1N4H # _exptl.entry_id 1N4H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 300.435 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'RETINOIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1N4H _cell.length_a 52.199 _cell.length_b 58.125 _cell.length_c 106.039 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1N4H _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H28 O2' _chem_comp.formula_weight 300.435 _chem_comp.id REA _chem_comp.mon_nstd_flag . _chem_comp.name 'RETINOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 REA sing 277 n n C1 C6 REA sing 278 n n C1 C16 REA sing 279 n n C1 C17 REA sing 280 n n C2 C3 REA sing 281 n n C2 H21 REA sing 282 n n C2 H22 REA sing 283 n n C3 C4 REA sing 284 n n C3 H31 REA sing 285 n n C3 H32 REA sing 286 n n C4 C5 REA sing 287 n n C4 H41 REA sing 288 n n C4 H42 REA sing 289 n n C5 C6 REA doub 290 n n C5 C18 REA sing 291 n n C6 C7 REA sing 292 n n C7 C8 REA doub 293 e n C7 H7 REA sing 294 n n C8 C9 REA sing 295 n n C8 H8 REA sing 296 n n C9 C10 REA doub 297 e n C9 C19 REA sing 298 n n C10 C11 REA sing 299 n n C10 H10 REA sing 300 n n C11 C12 REA doub 301 e n C11 H11 REA sing 302 n n C12 C13 REA sing 303 n n C12 H12 REA sing 304 n n C13 C14 REA doub 305 e n C13 C20 REA sing 306 n n C14 C15 REA sing 307 n n C14 H14 REA sing 308 n n C15 O1 REA doub 309 n n C15 O2 REA sing 310 n n C16 H161 REA sing 311 n n C16 H162 REA sing 312 n n C16 H163 REA sing 313 n n C17 H171 REA sing 314 n n C17 H172 REA sing 315 n n C17 H173 REA sing 316 n n C18 H181 REA sing 317 n n C18 H182 REA sing 318 n n C18 H183 REA sing 319 n n C19 H191 REA sing 320 n n C19 H192 REA sing 321 n n C19 H193 REA sing 322 n n C20 H201 REA sing 323 n n C20 H202 REA sing 324 n n C20 H203 REA sing 325 n n O2 HO2 REA sing 326 n n # _atom_sites.entry_id 1N4H _atom_sites.fract_transf_matrix[1][1] 0.019157 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017204 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00943 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 REA A 1 500 500 REA REA . D 4 HOH A 1 801 801 HOH WAT . D 4 HOH A 2 802 802 HOH WAT . D 4 HOH A 3 803 803 HOH WAT . D 4 HOH A 4 804 804 HOH WAT . D 4 HOH A 5 805 805 HOH WAT . D 4 HOH A 6 806 806 HOH WAT . D 4 HOH A 7 807 807 HOH WAT . D 4 HOH A 8 808 808 HOH WAT . D 4 HOH A 9 809 809 HOH WAT . D 4 HOH A 10 810 810 HOH WAT . D 4 HOH A 11 811 811 HOH WAT . D 4 HOH A 12 812 812 HOH WAT . D 4 HOH A 13 813 813 HOH WAT . D 4 HOH A 14 814 814 HOH WAT . D 4 HOH A 15 815 815 HOH WAT . D 4 HOH A 16 816 816 HOH WAT . D 4 HOH A 17 817 817 HOH WAT . D 4 HOH A 18 818 818 HOH WAT . D 4 HOH A 19 819 819 HOH WAT . D 4 HOH A 20 820 820 HOH WAT . D 4 HOH A 21 821 821 HOH WAT . D 4 HOH A 22 822 822 HOH WAT . D 4 HOH A 23 823 823 HOH WAT . D 4 HOH A 24 825 825 HOH WAT . D 4 HOH A 25 832 832 HOH WAT . D 4 HOH A 26 835 835 HOH WAT . D 4 HOH A 27 836 836 HOH WAT . D 4 HOH A 28 837 837 HOH WAT . D 4 HOH A 29 839 839 HOH WAT . D 4 HOH A 30 840 840 HOH WAT . D 4 HOH A 31 841 841 HOH WAT . D 4 HOH A 32 842 842 HOH WAT . D 4 HOH A 33 843 843 HOH WAT . D 4 HOH A 34 844 844 HOH WAT . D 4 HOH A 35 846 846 HOH WAT . D 4 HOH A 36 847 847 HOH WAT . D 4 HOH A 37 848 848 HOH WAT . D 4 HOH A 38 849 849 HOH WAT . D 4 HOH A 39 850 850 HOH WAT . D 4 HOH A 40 851 851 HOH WAT . D 4 HOH A 41 852 852 HOH WAT . D 4 HOH A 42 853 853 HOH WAT . D 4 HOH A 43 854 854 HOH WAT . D 4 HOH A 44 855 855 HOH WAT . D 4 HOH A 45 856 856 HOH WAT . D 4 HOH A 46 857 857 HOH WAT . D 4 HOH A 47 858 858 HOH WAT . D 4 HOH A 48 859 859 HOH WAT . D 4 HOH A 49 860 860 HOH WAT . D 4 HOH A 50 861 861 HOH WAT . D 4 HOH A 51 862 862 HOH WAT . D 4 HOH A 52 863 863 HOH WAT . D 4 HOH A 53 865 865 HOH WAT . D 4 HOH A 54 866 866 HOH WAT . D 4 HOH A 55 867 867 HOH WAT . D 4 HOH A 56 868 868 HOH WAT . D 4 HOH A 57 869 869 HOH WAT . D 4 HOH A 58 870 870 HOH WAT . D 4 HOH A 59 871 871 HOH WAT . D 4 HOH A 60 873 873 HOH WAT . D 4 HOH A 61 875 875 HOH WAT . D 4 HOH A 62 876 876 HOH WAT . D 4 HOH A 63 877 877 HOH WAT . D 4 HOH A 64 878 878 HOH WAT . D 4 HOH A 65 879 879 HOH WAT . D 4 HOH A 66 880 880 HOH WAT . D 4 HOH A 67 881 881 HOH WAT . D 4 HOH A 68 883 883 HOH WAT . D 4 HOH A 69 884 884 HOH WAT . D 4 HOH A 70 885 885 HOH WAT . D 4 HOH A 71 886 886 HOH WAT . D 4 HOH A 72 887 887 HOH WAT . D 4 HOH A 73 889 889 HOH WAT . D 4 HOH A 74 890 890 HOH WAT . D 4 HOH A 75 891 891 HOH WAT . D 4 HOH A 76 893 893 HOH WAT . D 4 HOH A 77 894 894 HOH WAT . D 4 HOH A 78 895 895 HOH WAT . D 4 HOH A 79 896 896 HOH WAT . D 4 HOH A 80 898 898 HOH WAT . D 4 HOH A 81 899 899 HOH WAT . D 4 HOH A 82 900 900 HOH WAT . D 4 HOH A 83 901 901 HOH WAT . D 4 HOH A 84 904 904 HOH WAT . D 4 HOH A 85 905 905 HOH WAT . D 4 HOH A 86 906 906 HOH WAT . D 4 HOH A 87 907 907 HOH WAT . D 4 HOH A 88 908 908 HOH WAT . D 4 HOH A 89 909 909 HOH WAT . D 4 HOH A 90 910 910 HOH WAT . D 4 HOH A 91 911 911 HOH WAT . D 4 HOH A 92 913 913 HOH WAT . D 4 HOH A 93 914 914 HOH WAT . D 4 HOH A 94 915 915 HOH WAT . D 4 HOH A 95 916 916 HOH WAT . D 4 HOH A 96 917 917 HOH WAT . D 4 HOH A 97 918 918 HOH WAT . D 4 HOH A 98 919 919 HOH WAT . D 4 HOH A 99 920 920 HOH WAT . D 4 HOH A 100 921 921 HOH WAT . D 4 HOH A 101 922 922 HOH WAT . D 4 HOH A 102 923 923 HOH WAT . D 4 HOH A 103 924 924 HOH WAT . D 4 HOH A 104 925 925 HOH WAT . D 4 HOH A 105 926 926 HOH WAT . D 4 HOH A 106 927 927 HOH WAT . D 4 HOH A 107 928 928 HOH WAT . D 4 HOH A 108 929 929 HOH WAT . E 4 HOH B 1 874 874 HOH WAT . E 4 HOH B 2 892 892 HOH WAT . E 4 HOH B 3 902 902 HOH WAT . E 4 HOH B 4 903 903 HOH WAT . E 4 HOH B 5 912 912 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 REA . . . C 3 22.676 32.386 7.585 1 44.5 ? C1 REA 500 A 1 HETATM 2 C C2 REA . . . C 3 21.906 33.574 6.875 1 44.98 ? C2 REA 500 A 1 HETATM 3 C C3 REA . . . C 3 21.637 33.455 5.374 1 44.93 ? C3 REA 500 A 1 HETATM 4 C C4 REA . . . C 3 22.79 32.926 4.506 1 44.46 ? C4 REA 500 A 1 HETATM 5 C C5 REA . . . C 3 23.891 32.096 5.255 1 43.67 ? C5 REA 500 A 1 HETATM 6 C C6 REA . . . C 3 23.862 31.835 6.638 1 43.2 ? C6 REA 500 A 1 HETATM 7 C C7 REA . . . C 3 24.919 31.045 7.334 1 41.74 ? C7 REA 500 A 1 HETATM 8 C C8 REA . . . C 3 25.046 29.71 7.573 1 39.16 ? C8 REA 500 A 1 HETATM 9 C C9 REA . . . C 3 26.08 29.094 8.397 1 39.94 ? C9 REA 500 A 1 HETATM 10 C C10 REA . . . C 3 26.066 27.725 8.531 1 38.09 ? C10 REA 500 A 1 HETATM 11 C C11 REA . . . C 3 27.051 27.018 9.329 1 37.73 ? C11 REA 500 A 1 HETATM 12 C C12 REA . . . C 3 27.07 25.694 9.44 1 38.2 ? C12 REA 500 A 1 HETATM 13 C C13 REA . . . C 3 28.057 24.977 10.242 1 38.84 ? C13 REA 500 A 1 HETATM 14 C C14 REA . . . C 3 27.951 23.626 10.224 1 37.18 ? C14 REA 500 A 1 HETATM 15 C C15 REA . . . C 3 28.705 22.564 10.87 1 35.72 ? C15 REA 500 A 1 HETATM 16 C C16 REA . . . C 3 21.65 31.254 7.888 1 44.54 ? C16 REA 500 A 1 HETATM 17 C C17 REA . . . C 3 23.235 32.99 8.91 1 45.8 ? C17 REA 500 A 1 HETATM 18 C C18 REA . . . C 3 24.948 31.651 4.234 1 44.27 ? C18 REA 500 A 1 HETATM 19 C C19 REA . . . C 3 27.157 29.991 9.084 1 38.1 ? C19 REA 500 A 1 HETATM 20 C C20 REA . . . C 3 29.159 25.776 11.043 1 39.8 ? C20 REA 500 A 1 HETATM 21 O O1 REA . . . C 3 28.377 21.424 10.626 1 36.55 ? O1 REA 500 A 1 HETATM 22 O O2 REA . . . C 3 29.641 22.779 11.628 1 31.83 ? O2 REA 500 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 390 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 22 #