data_1N4K # _model_server_result.job_id -9xlDc7WLsDaoqjAhTPv_Q _model_server_result.datetime_utc '2024-10-24 04:23:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1n4k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1000}' # _entry.id 1N4K # _exptl.entry_id 1N4K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 420.096 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1N4K _cell.length_a 44.101 _cell.length_b 90.42 _cell.length_c 207.117 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1N4K _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H15 O15 P3' _chem_comp.formula_weight 420.096 _chem_comp.id I3P _chem_comp.mon_nstd_flag . _chem_comp.name D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 I3P sing 152 n n C1 C6 I3P sing 153 n n C1 O1 I3P sing 154 n n C1 H1 I3P sing 155 n n C2 C3 I3P sing 156 n n C2 O2 I3P sing 157 n n C2 H2 I3P sing 158 n n C3 C4 I3P sing 159 n n C3 O3 I3P sing 160 n n C3 H3 I3P sing 161 n n C4 C5 I3P sing 162 n n C4 O4 I3P sing 163 n n C4 H4 I3P sing 164 n n C5 C6 I3P sing 165 n n C5 O5 I3P sing 166 n n C5 H5 I3P sing 167 n n C6 O6 I3P sing 168 n n C6 H6 I3P sing 169 n n O1 P1 I3P sing 170 n n O2 HO2 I3P sing 171 n n O3 HO3 I3P sing 172 n n O4 P4 I3P sing 173 n n O5 P5 I3P sing 174 n n O6 HO6 I3P sing 175 n n P1 O11 I3P doub 176 n n P1 O12 I3P sing 177 n n P1 O13 I3P sing 178 n n O12 HO12 I3P sing 179 n n O13 HO13 I3P sing 180 n n P4 O41 I3P doub 181 n n P4 O42 I3P sing 182 n n P4 O43 I3P sing 183 n n O42 HO42 I3P sing 184 n n O43 HO43 I3P sing 185 n n P5 O51 I3P doub 186 n n P5 O52 I3P sing 187 n n P5 O53 I3P sing 188 n n O52 HO52 I3P sing 189 n n O53 HO53 I3P sing 190 n n # _atom_sites.entry_id 1N4K _atom_sites.fract_transf_matrix[1][1] 0.022675 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01106 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004828 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 I3P A 1 1000 1000 I3P I3P . C 3 HOH A 1 1101 1101 HOH HOH . C 3 HOH A 2 1102 1102 HOH HOH . C 3 HOH A 3 1103 1103 HOH HOH . C 3 HOH A 4 1104 1104 HOH HOH . C 3 HOH A 5 1105 1105 HOH HOH . C 3 HOH A 6 1106 1106 HOH HOH . C 3 HOH A 7 1107 1107 HOH HOH . C 3 HOH A 8 1108 1108 HOH HOH . C 3 HOH A 9 1109 1109 HOH HOH . C 3 HOH A 10 1110 1110 HOH HOH . C 3 HOH A 11 1111 1111 HOH HOH . C 3 HOH A 12 1112 1112 HOH HOH . C 3 HOH A 13 1113 1113 HOH HOH . C 3 HOH A 14 1114 1114 HOH HOH . C 3 HOH A 15 1115 1115 HOH HOH . C 3 HOH A 16 1116 1116 HOH HOH . C 3 HOH A 17 1117 1117 HOH HOH . C 3 HOH A 18 1118 1118 HOH HOH . C 3 HOH A 19 1119 1119 HOH HOH . C 3 HOH A 20 1120 1120 HOH HOH . C 3 HOH A 21 1121 1121 HOH HOH . C 3 HOH A 22 1122 1122 HOH HOH . C 3 HOH A 23 1123 1123 HOH HOH . C 3 HOH A 24 1124 1124 HOH HOH . C 3 HOH A 25 1125 1125 HOH HOH . C 3 HOH A 26 1126 1126 HOH HOH . C 3 HOH A 27 1127 1127 HOH HOH . C 3 HOH A 28 1128 1128 HOH HOH . C 3 HOH A 29 1129 1129 HOH HOH . C 3 HOH A 30 1130 1130 HOH HOH . C 3 HOH A 31 1131 1131 HOH HOH . C 3 HOH A 32 1132 1132 HOH HOH . C 3 HOH A 33 1133 1133 HOH HOH . C 3 HOH A 34 1134 1134 HOH HOH . C 3 HOH A 35 1135 1135 HOH HOH . C 3 HOH A 36 1136 1136 HOH HOH . C 3 HOH A 37 1137 1137 HOH HOH . C 3 HOH A 38 1138 1138 HOH HOH . C 3 HOH A 39 1139 1139 HOH HOH . C 3 HOH A 40 1140 1140 HOH HOH . C 3 HOH A 41 1141 1141 HOH HOH . C 3 HOH A 42 1142 1142 HOH HOH . C 3 HOH A 43 1143 1143 HOH HOH . C 3 HOH A 44 1144 1144 HOH HOH . C 3 HOH A 45 1145 1145 HOH HOH . C 3 HOH A 46 1146 1146 HOH HOH . C 3 HOH A 47 1147 1147 HOH HOH . C 3 HOH A 48 1148 1148 HOH HOH . C 3 HOH A 49 1149 1149 HOH HOH . C 3 HOH A 50 1150 1150 HOH HOH . C 3 HOH A 51 1151 1151 HOH HOH . C 3 HOH A 52 1152 1152 HOH HOH . C 3 HOH A 53 1153 1153 HOH HOH . C 3 HOH A 54 1154 1154 HOH HOH . C 3 HOH A 55 1155 1155 HOH HOH . C 3 HOH A 56 1156 1156 HOH HOH . C 3 HOH A 57 1157 1157 HOH HOH . C 3 HOH A 58 1158 1158 HOH HOH . C 3 HOH A 59 1159 1159 HOH HOH . C 3 HOH A 60 1160 1160 HOH HOH . C 3 HOH A 61 1161 1161 HOH HOH . C 3 HOH A 62 1162 1162 HOH HOH . C 3 HOH A 63 1163 1163 HOH HOH . C 3 HOH A 64 1164 1164 HOH HOH . C 3 HOH A 65 1165 1165 HOH HOH . C 3 HOH A 66 1166 1166 HOH HOH . C 3 HOH A 67 1167 1167 HOH HOH . C 3 HOH A 68 1168 1168 HOH HOH . C 3 HOH A 69 1169 1169 HOH HOH . C 3 HOH A 70 1170 1170 HOH HOH . C 3 HOH A 71 1171 1171 HOH HOH . C 3 HOH A 72 1172 1172 HOH HOH . C 3 HOH A 73 1173 1173 HOH HOH . C 3 HOH A 74 1174 1174 HOH HOH . C 3 HOH A 75 1175 1175 HOH HOH . C 3 HOH A 76 1176 1176 HOH HOH . C 3 HOH A 77 1177 1177 HOH HOH . C 3 HOH A 78 1178 1178 HOH HOH . C 3 HOH A 79 1180 1180 HOH HOH . C 3 HOH A 80 1181 1181 HOH HOH . C 3 HOH A 81 1182 1182 HOH HOH . C 3 HOH A 82 1183 1183 HOH HOH . C 3 HOH A 83 1184 1184 HOH HOH . C 3 HOH A 84 1185 1185 HOH HOH . C 3 HOH A 85 1186 1186 HOH HOH . C 3 HOH A 86 1187 1187 HOH HOH . C 3 HOH A 87 1188 1188 HOH HOH . C 3 HOH A 88 1189 1189 HOH HOH . C 3 HOH A 89 1190 1190 HOH HOH . C 3 HOH A 90 1191 1191 HOH HOH . C 3 HOH A 91 1192 1192 HOH HOH . C 3 HOH A 92 1193 1193 HOH HOH . C 3 HOH A 93 1194 1194 HOH HOH . C 3 HOH A 94 1195 1195 HOH HOH . C 3 HOH A 95 1196 1196 HOH HOH . C 3 HOH A 96 1197 1197 HOH HOH . C 3 HOH A 97 1198 1198 HOH HOH . C 3 HOH A 98 1199 1199 HOH HOH . C 3 HOH A 99 1200 1200 HOH HOH . C 3 HOH A 100 1201 1201 HOH HOH . C 3 HOH A 101 1202 1202 HOH HOH . C 3 HOH A 102 1203 1203 HOH HOH . C 3 HOH A 103 1204 1204 HOH HOH . C 3 HOH A 104 1205 1205 HOH HOH . C 3 HOH A 105 1207 1207 HOH HOH . C 3 HOH A 106 1208 1208 HOH HOH . C 3 HOH A 107 1209 1209 HOH HOH . C 3 HOH A 108 1210 1210 HOH HOH . C 3 HOH A 109 1211 1211 HOH HOH . C 3 HOH A 110 1212 1212 HOH HOH . C 3 HOH A 111 1213 1213 HOH HOH . C 3 HOH A 112 1214 1214 HOH HOH . C 3 HOH A 113 1215 1215 HOH HOH . C 3 HOH A 114 1216 1216 HOH HOH . C 3 HOH A 115 1217 1217 HOH HOH . C 3 HOH A 116 1218 1218 HOH HOH . C 3 HOH A 117 1219 1219 HOH HOH . C 3 HOH A 118 1220 1220 HOH HOH . C 3 HOH A 119 1221 1221 HOH HOH . C 3 HOH A 120 1222 1222 HOH HOH . C 3 HOH A 121 1223 1223 HOH HOH . C 3 HOH A 122 1224 1224 HOH HOH . C 3 HOH A 123 1225 1225 HOH HOH . C 3 HOH A 124 1226 1226 HOH HOH . C 3 HOH A 125 1227 1227 HOH HOH . C 3 HOH A 126 1228 1228 HOH HOH . C 3 HOH A 127 1229 1229 HOH HOH . C 3 HOH A 128 1230 1230 HOH HOH . C 3 HOH A 129 1231 1231 HOH HOH . C 3 HOH A 130 1232 1232 HOH HOH . C 3 HOH A 131 1233 1233 HOH HOH . C 3 HOH A 132 1234 1234 HOH HOH . C 3 HOH A 133 1235 1235 HOH HOH . C 3 HOH A 134 1236 1236 HOH HOH . C 3 HOH A 135 1237 1237 HOH HOH . C 3 HOH A 136 1238 1238 HOH HOH . C 3 HOH A 137 1239 1239 HOH HOH . C 3 HOH A 138 1240 1240 HOH HOH . C 3 HOH A 139 1241 1241 HOH HOH . C 3 HOH A 140 1242 1242 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 I3P . . . B 2 23.163 -2.11 10.263 1 30.22 ? C1 I3P 1000 A 1 HETATM 2 C C2 I3P . . . B 2 22.571 -3.49 10.68 1 30.18 ? C2 I3P 1000 A 1 HETATM 3 C C3 I3P . . . B 2 22.943 -3.802 12.131 1 28.98 ? C3 I3P 1000 A 1 HETATM 4 C C4 I3P . . . B 2 22.386 -2.694 13.05 1 27.74 ? C4 I3P 1000 A 1 HETATM 5 C C5 I3P . . . B 2 22.967 -1.328 12.637 1 26.32 ? C5 I3P 1000 A 1 HETATM 6 C C6 I3P . . . B 2 22.604 -0.995 11.175 1 25.95 ? C6 I3P 1000 A 1 HETATM 7 O O1 I3P . . . B 2 22.81 -1.708 8.88 1 32.23 ? O1 I3P 1000 A 1 HETATM 8 O O2 I3P . . . B 2 21.144 -3.487 10.545 1 32.53 ? O2 I3P 1000 A 1 HETATM 9 O O3 I3P . . . B 2 22.388 -5.046 12.499 1 30.95 ? O3 I3P 1000 A 1 HETATM 10 O O4 I3P . . . B 2 22.75 -3.022 14.448 1 29.2 ? O4 I3P 1000 A 1 HETATM 11 O O5 I3P . . . B 2 22.404 -0.286 13.519 1 20.91 ? O5 I3P 1000 A 1 HETATM 12 O O6 I3P . . . B 2 23.159 0.259 10.789 1 26.06 ? O6 I3P 1000 A 1 HETATM 13 P P1 I3P . . . B 2 23.682 -2.058 7.594 1 33.11 ? P1 I3P 1000 A 1 HETATM 14 O O11 I3P . . . B 2 22.953 -1.434 6.457 1 35.05 ? O11 I3P 1000 A 1 HETATM 15 O O12 I3P . . . B 2 23.709 -3.543 7.568 1 32.69 ? O12 I3P 1000 A 1 HETATM 16 O O13 I3P . . . B 2 24.966 -1.47 7.969 1 29.08 ? O13 I3P 1000 A 1 HETATM 17 P P4 I3P . . . B 2 21.774 -3.57 15.587 1 28.66 ? P4 I3P 1000 A 1 HETATM 18 O O41 I3P . . . B 2 20.722 -2.52 15.547 1 29.29 ? O41 I3P 1000 A 1 HETATM 19 O O42 I3P . . . B 2 21.336 -4.862 15.064 1 31.89 ? O42 I3P 1000 A 1 HETATM 20 O O43 I3P . . . B 2 22.557 -3.684 16.844 1 30.07 ? O43 I3P 1000 A 1 HETATM 21 P P5 I3P . . . B 2 23.158 0.946 14.204 1 22.15 ? P5 I3P 1000 A 1 HETATM 22 O O51 I3P . . . B 2 22.026 1.567 14.939 1 22.27 ? O51 I3P 1000 A 1 HETATM 23 O O52 I3P . . . B 2 24.219 0.31 15.037 1 21.24 ? O52 I3P 1000 A 1 HETATM 24 O O53 I3P . . . B 2 23.635 1.689 13.043 1 24.19 ? O53 I3P 1000 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 24 #