data_1N5X
#
_model_server_result.job_id            gR4IqfLu98FEaz-5moYvMg 
_model_server_result.datetime_utc      '2025-04-14 02:43:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1n5x 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":4005}' 
#
_entry.id    1N5X 
#
_exptl.entry_id    1N5X 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.99 
_cell.angle_gamma         90 
_cell.entry_id            1N5X 
_cell.length_a            168.269 
_cell.length_b            124.659 
_cell.length_c            147.325 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1N5X 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 G N N 
? 5 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 42 A CYS 43 1_555 D FE2 FES . A FES 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? 
metalc ? metalc2 A SG CYS 47 A CYS 48 1_555 D FE2 FES . A FES 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? 
metalc ? metalc3 A SG CYS 50 A CYS 51 1_555 D FE1 FES . A FES 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? 
metalc ? metalc4 A SG CYS 72 A CYS 73 1_555 D FE1 FES . A FES 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? 
metalc ? metalc5 A SG CYS 112 A CYS 113 1_555 C FE1 FES . A FES 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? 
metalc ? metalc6 A SG CYS 115 A CYS 116 1_555 C FE2 FES . A FES 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? 
metalc ? metalc7 A SG CYS 147 A CYS 148 1_555 C FE2 FES . A FES 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? 
metalc ? metalc8 A SG CYS 149 A CYS 150 1_555 C FE1 FES . A FES 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? 
metalc ? metalc9 E S1' MTE . A MTE 3003 1_555 F MO MOS . A MOS 3004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? 
metalc ? metalc10 E S2' MTE . A MTE 3003 1_555 F MO MOS . A MOS 3004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? 
metalc ? metalc11 B SG CYS 42 B CYS 43 1_555 J FE2 FES . B FES 4002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? 
metalc ? metalc12 B SG CYS 47 B CYS 48 1_555 J FE2 FES . B FES 4002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? 
metalc ? metalc13 B SG CYS 50 B CYS 51 1_555 J FE1 FES . B FES 4002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? 
metalc ? metalc14 B SG CYS 72 B CYS 73 1_555 J FE1 FES . B FES 4002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? 
metalc ? metalc15 B SG CYS 112 B CYS 113 1_555 I FE1 FES . B FES 4001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? 
metalc ? metalc16 B SG CYS 115 B CYS 116 1_555 I FE2 FES . B FES 4001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? 
metalc ? metalc17 B SG CYS 147 B CYS 148 1_555 I FE2 FES . B FES 4001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? 
metalc ? metalc18 B SG CYS 149 B CYS 150 1_555 I FE1 FES . B FES 4001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? 
metalc ? metalc19 K S1' MTE . B MTE 4003 1_555 L MO MOS . B MOS 4004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? 
metalc ? metalc20 K S2' MTE . B MTE 4003 1_555 L MO MOS . B MOS 4004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     1N5X 
_atom_sites.fract_transf_matrix[1][1]    0.005943 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000103 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008022 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006789 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FES A 1 3001 3001 FES FES . 
D 2 FES A 1 3002 3002 FES FES . 
E 3 MTE A 1 3003 3003 MTE MTE . 
F 4 MOS A 1 3004 3004 MOS MOS . 
G 5 FAD A 1 3005 3005 FAD FAD . 
H 6 TEI A 1 3006 3006 TEI TEI . 
I 2 FES B 1 4001 4001 FES FES . 
J 2 FES B 1 4002 4002 FES FES . 
K 3 MTE B 1 4003 4003 MTE MTE . 
L 4 MOS B 1 4004 4004 MOS MOS . 
M 5 FAD B 1 4005 4005 FAD FAD . 
N 6 TEI B 1 4006 4006 TEI TEI . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . M 5 140.909 107.33 51.55 1 15.97 ? PA FAD 4005 B 1 
HETATM 2 O O1A FAD . . . M 5 139.893 107.016 50.54 1 15.97 ? O1A FAD 4005 B 1 
HETATM 3 O O2A FAD . . . M 5 141.893 106.433 51.734 1 15.97 ? O2A FAD 4005 B 1 
HETATM 4 O O5B FAD . . . M 5 141.365 108.491 50.743 1 15.97 ? O5B FAD 4005 B 1 
HETATM 5 C C5B FAD . . . M 5 142.377 109.4 51.173 1 15.97 ? C5B FAD 4005 B 1 
HETATM 6 C C4B FAD . . . M 5 143.156 110.249 50.126 1 15.97 ? C4B FAD 4005 B 1 
HETATM 7 O O4B FAD . . . M 5 144.104 110.776 51.015 1 15.97 ? O4B FAD 4005 B 1 
HETATM 8 C C3B FAD . . . M 5 144.019 109.638 49.045 1 15.97 ? C3B FAD 4005 B 1 
HETATM 9 O O3B FAD . . . M 5 144.247 110.548 47.974 1 15.97 ? O3B FAD 4005 B 1 
HETATM 10 C C2B FAD . . . M 5 145.211 109.134 49.86 1 15.97 ? C2B FAD 4005 B 1 
HETATM 11 O O2B FAD . . . M 5 146.282 108.948 49.125 1 15.97 ? O2B FAD 4005 B 1 
HETATM 12 C C1B FAD . . . M 5 145.423 110.184 50.837 1 15.97 ? C1B FAD 4005 B 1 
HETATM 13 N N9A FAD . . . M 5 145.901 109.807 52.223 1 15.97 ? N9A FAD 4005 B 1 
HETATM 14 C C8A FAD . . . M 5 145.244 109.111 53.198 1 15.97 ? C8A FAD 4005 B 1 
HETATM 15 N N7A FAD . . . M 5 145.794 108.893 54.342 1 15.97 ? N7A FAD 4005 B 1 
HETATM 16 C C5A FAD . . . M 5 146.924 109.473 54.176 1 15.97 ? C5A FAD 4005 B 1 
HETATM 17 C C6A FAD . . . M 5 148.137 109.631 55.132 1 15.97 ? C6A FAD 4005 B 1 
HETATM 18 N N6A FAD . . . M 5 148.202 109.161 56.322 1 15.97 ? N6A FAD 4005 B 1 
HETATM 19 N N1A FAD . . . M 5 149.251 110.361 54.626 1 15.97 ? N1A FAD 4005 B 1 
HETATM 20 C C2A FAD . . . M 5 149.273 110.949 53.248 1 15.97 ? C2A FAD 4005 B 1 
HETATM 21 N N3A FAD . . . M 5 148.186 110.838 52.27 1 15.97 ? N3A FAD 4005 B 1 
HETATM 22 C C4A FAD . . . M 5 147.029 110.096 52.766 1 15.97 ? C4A FAD 4005 B 1 
HETATM 23 N N1 FAD . . . M 5 133.855 114.596 54.018 1 15.97 ? N1 FAD 4005 B 1 
HETATM 24 C C2 FAD . . . M 5 133.659 115.745 54.704 1 15.97 ? C2 FAD 4005 B 1 
HETATM 25 O O2 FAD . . . M 5 134.506 116.509 54.815 1 15.97 ? O2 FAD 4005 B 1 
HETATM 26 N N3 FAD . . . M 5 132.367 115.979 55.393 1 15.97 ? N3 FAD 4005 B 1 
HETATM 27 C C4 FAD . . . M 5 131.271 115.026 55.264 1 15.97 ? C4 FAD 4005 B 1 
HETATM 28 O O4 FAD . . . M 5 130.157 115.241 55.872 1 15.97 ? O4 FAD 4005 B 1 
HETATM 29 C C4X FAD . . . M 5 131.517 113.775 54.386 1 15.97 ? C4X FAD 4005 B 1 
HETATM 30 N N5 FAD . . . M 5 130.527 112.801 54.181 1 15.97 ? N5 FAD 4005 B 1 
HETATM 31 C C5X FAD . . . M 5 130.736 111.657 53.447 1 15.97 ? C5X FAD 4005 B 1 
HETATM 32 C C6 FAD . . . M 5 129.591 110.745 53.234 1 15.97 ? C6 FAD 4005 B 1 
HETATM 33 C C7 FAD . . . M 5 129.759 109.544 52.456 1 15.97 ? C7 FAD 4005 B 1 
HETATM 34 C C7M FAD . . . M 5 128.556 108.823 52.332 1 15.97 ? C7M FAD 4005 B 1 
HETATM 35 C C8 FAD . . . M 5 131.168 109.17 51.856 1 15.97 ? C8 FAD 4005 B 1 
HETATM 36 C C8M FAD . . . M 5 131.561 108.012 51.084 1 15.97 ? C8M FAD 4005 B 1 
HETATM 37 C C9 FAD . . . M 5 132.278 110.062 52.047 1 15.97 ? C9 FAD 4005 B 1 
HETATM 38 C C9A FAD . . . M 5 132.138 111.32 52.811 1 15.97 ? C9A FAD 4005 B 1 
HETATM 39 N N10 FAD . . . M 5 133.212 112.451 53.075 1 15.97 ? N10 FAD 4005 B 1 
HETATM 40 C C10 FAD . . . M 5 132.908 113.63 53.818 1 15.97 ? C10 FAD 4005 B 1 
HETATM 41 C C1' FAD . . . M 5 134.626 112.391 52.58 1 15.97 ? C1' FAD 4005 B 1 
HETATM 42 C C2' FAD . . . M 5 135.376 111.428 53.453 1 15.97 ? C2' FAD 4005 B 1 
HETATM 43 O O2' FAD . . . M 5 134.973 111.337 54.735 1 15.97 ? O2' FAD 4005 B 1 
HETATM 44 C C3' FAD . . . M 5 136.8 111.576 53.287 1 15.97 ? C3' FAD 4005 B 1 
HETATM 45 O O3' FAD . . . M 5 137.426 111.878 51.887 1 15.97 ? O3' FAD 4005 B 1 
HETATM 46 C C4' FAD . . . M 5 137.473 110.45 54.284 1 15.97 ? C4' FAD 4005 B 1 
HETATM 47 O O4' FAD . . . M 5 137.77 111.192 55.513 1 15.97 ? O4' FAD 4005 B 1 
HETATM 48 C C5' FAD . . . M 5 138.768 110.211 53.913 1 15.97 ? C5' FAD 4005 B 1 
HETATM 49 O O5' FAD . . . M 5 139.473 109.022 54.694 1 15.97 ? O5' FAD 4005 B 1 
HETATM 50 P P FAD . . . M 5 139.728 107.728 54.064 1 15.97 ? P FAD 4005 B 1 
HETATM 51 O O1P FAD . . . M 5 140.515 107.165 55.094 1 15.97 ? O1P FAD 4005 B 1 
HETATM 52 O O2P FAD . . . M 5 138.573 107.076 53.623 1 15.97 ? O2P FAD 4005 B 1 
HETATM 53 O O3P FAD . . . M 5 140.419 107.977 52.924 1 15.97 ? O3P FAD 4005 B 1 
#
_model_server_stats.io_time_ms              45 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    39 
_model_server_stats.query_time_ms           431 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           53 
#