data_1N69 # _model_server_result.job_id tdZGsD7SGCaYKKAZjCoufA _model_server_result.datetime_utc '2024-10-16 12:29:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1n69 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":300}' # _entry.id 1N69 # _exptl.entry_id 1N69 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 748.065 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-Distearoyl-sn-glycerophosphoethanolamine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1N69 _cell.length_a 72.14 _cell.length_b 72.14 _cell.length_c 94.366 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1N69 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,D,E,F 1 1 C,G 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 -x,-x+y,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 31.455333 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 4 1_555 A SG CYS 79 A CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf2 A SG CYS 9 A CYS 7 1_555 A SG CYS 73 A CYS 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf3 A SG CYS 38 A CYS 36 1_555 A SG CYS 49 A CYS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf4 B SG CYS 6 B CYS 4 1_555 B SG CYS 79 B CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf5 B SG CYS 9 B CYS 7 1_555 B SG CYS 73 B CYS 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf6 B SG CYS 38 B CYS 36 1_555 B SG CYS 49 B CYS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf7 C SG CYS 6 C CYS 4 1_555 C SG CYS 79 C CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf8 C SG CYS 9 C CYS 7 1_555 C SG CYS 73 C CYS 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf9 C SG CYS 38 C CYS 36 1_555 C SG CYS 49 C CYS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? # _chem_comp.formula 'C41 H82 N O8 P' _chem_comp.formula_weight 748.065 _chem_comp.id 3PE _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-Distearoyl-sn-glycerophosphoethanolamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 3-SN-PHOSPHATIDYLETHANOLAMINE;1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE # _atom_sites.entry_id 1N69 _atom_sites.fract_transf_matrix[1][1] 0.013862 _atom_sites.fract_transf_matrix[1][2] 0.008003 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016006 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010597 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 3PE A 1 300 300 3PE PEH . E 3 HOH A 1 503 503 HOH HOH . E 3 HOH A 2 507 507 HOH HOH . E 3 HOH A 3 509 509 HOH HOH . E 3 HOH A 4 513 513 HOH HOH . E 3 HOH A 5 515 515 HOH HOH . E 3 HOH A 6 516 516 HOH HOH . E 3 HOH A 7 517 517 HOH HOH . E 3 HOH A 8 518 518 HOH HOH . E 3 HOH A 9 519 519 HOH HOH . E 3 HOH A 10 530 530 HOH HOH . E 3 HOH A 11 531 531 HOH HOH . E 3 HOH A 12 537 537 HOH HOH . E 3 HOH A 13 539 539 HOH HOH . E 3 HOH A 14 541 541 HOH HOH . E 3 HOH A 15 543 543 HOH HOH . E 3 HOH A 16 548 548 HOH HOH . E 3 HOH A 17 551 551 HOH HOH . E 3 HOH A 18 555 555 HOH HOH . E 3 HOH A 19 559 559 HOH HOH . E 3 HOH A 20 562 562 HOH HOH . E 3 HOH A 21 564 564 HOH HOH . E 3 HOH A 22 565 565 HOH HOH . E 3 HOH A 23 566 566 HOH HOH . E 3 HOH A 24 567 567 HOH HOH . E 3 HOH A 25 568 568 HOH HOH . E 3 HOH A 26 569 569 HOH HOH . E 3 HOH A 27 584 584 HOH HOH . E 3 HOH A 28 588 588 HOH HOH . E 3 HOH A 29 589 589 HOH HOH . F 3 HOH B 1 501 501 HOH HOH . F 3 HOH B 2 502 502 HOH HOH . F 3 HOH B 3 504 504 HOH HOH . F 3 HOH B 4 508 508 HOH HOH . F 3 HOH B 5 512 512 HOH HOH . F 3 HOH B 6 520 520 HOH HOH . F 3 HOH B 7 522 522 HOH HOH . F 3 HOH B 8 526 526 HOH HOH . F 3 HOH B 9 532 532 HOH HOH . F 3 HOH B 10 533 533 HOH HOH . F 3 HOH B 11 540 540 HOH HOH . F 3 HOH B 12 544 544 HOH HOH . F 3 HOH B 13 546 546 HOH HOH . F 3 HOH B 14 547 547 HOH HOH . F 3 HOH B 15 549 549 HOH HOH . F 3 HOH B 16 550 550 HOH HOH . F 3 HOH B 17 560 560 HOH HOH . F 3 HOH B 18 561 561 HOH HOH . F 3 HOH B 19 563 563 HOH HOH . F 3 HOH B 20 570 570 HOH HOH . F 3 HOH B 21 571 571 HOH HOH . F 3 HOH B 22 572 572 HOH HOH . F 3 HOH B 23 580 580 HOH HOH . F 3 HOH B 24 581 581 HOH HOH . F 3 HOH B 25 590 590 HOH HOH . G 3 HOH C 1 505 505 HOH HOH . G 3 HOH C 2 506 506 HOH HOH . G 3 HOH C 3 510 510 HOH HOH . G 3 HOH C 4 511 511 HOH HOH . G 3 HOH C 5 514 514 HOH HOH . G 3 HOH C 6 521 521 HOH HOH . G 3 HOH C 7 523 523 HOH HOH . G 3 HOH C 8 524 524 HOH HOH . G 3 HOH C 9 525 525 HOH HOH . G 3 HOH C 10 527 527 HOH HOH . G 3 HOH C 11 528 528 HOH HOH . G 3 HOH C 12 529 529 HOH HOH . G 3 HOH C 13 534 534 HOH HOH . G 3 HOH C 14 535 535 HOH HOH . G 3 HOH C 15 536 536 HOH HOH . G 3 HOH C 16 538 538 HOH HOH . G 3 HOH C 17 542 542 HOH HOH . G 3 HOH C 18 545 545 HOH HOH . G 3 HOH C 19 552 552 HOH HOH . G 3 HOH C 20 553 553 HOH HOH . G 3 HOH C 21 554 554 HOH HOH . G 3 HOH C 22 556 556 HOH HOH . G 3 HOH C 23 557 557 HOH HOH . G 3 HOH C 24 558 558 HOH HOH . G 3 HOH C 25 573 573 HOH HOH . G 3 HOH C 26 574 574 HOH HOH . G 3 HOH C 27 575 575 HOH HOH . G 3 HOH C 28 576 576 HOH HOH . G 3 HOH C 29 577 577 HOH HOH . G 3 HOH C 30 578 578 HOH HOH . G 3 HOH C 31 579 579 HOH HOH . G 3 HOH C 32 582 582 HOH HOH . G 3 HOH C 33 583 583 HOH HOH . G 3 HOH C 34 585 585 HOH HOH . G 3 HOH C 35 586 586 HOH HOH . G 3 HOH C 36 587 587 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P 3PE . . . D 2 28.896 7.454 9.859 1 111.89 ? P 3PE 300 A 1 HETATM 2 N N 3PE . . . D 2 28.048 4.834 6.349 1 110.81 ? N 3PE 300 A 1 HETATM 3 O O11 3PE . . . D 2 30.342 8.085 10.003 1 108.51 ? O11 3PE 300 A 1 HETATM 4 O O12 3PE . . . D 2 29.019 6.425 10.978 1 111.68 ? O12 3PE 300 A 1 HETATM 5 O O13 3PE . . . D 2 28.587 7.417 8.354 1 111.93 ? O13 3PE 300 A 1 HETATM 6 O O14 3PE . . . D 2 27.85 8.507 10.398 1 111.35 ? O14 3PE 300 A 1 HETATM 7 C C11 3PE . . . D 2 27.32 7.077 7.596 1 111.47 ? C11 3PE 300 A 1 HETATM 8 C C12 3PE . . . D 2 28.146 6.296 6.647 1 110.95 ? C12 3PE 300 A 1 HETATM 9 C C1 3PE . . . D 2 31.291 8.576 8.98 1 102.72 ? C1 3PE 300 A 1 HETATM 10 C C2 3PE . . . D 2 32.438 9.102 9.723 1 98.85 ? C2 3PE 300 A 1 HETATM 11 C C3 3PE . . . D 2 33.648 8.562 9.08 1 97.94 ? C3 3PE 300 A 1 HETATM 12 O O31 3PE . . . D 2 34.753 9.395 9.416 1 96.92 ? O31 3PE 300 A 1 HETATM 13 O O32 3PE . . . D 2 36.134 8.122 8.204 1 96.24 ? O32 3PE 300 A 1 HETATM 14 C C31 3PE . . . D 2 35.938 9.064 8.912 1 95.48 ? C31 3PE 300 A 1 HETATM 15 C C32 3PE . . . D 2 37.047 10.058 9.348 1 94.2 ? C32 3PE 300 A 1 HETATM 16 C C33 3PE . . . D 2 37.287 11.154 8.292 1 92.28 ? C33 3PE 300 A 1 HETATM 17 C C34 3PE . . . D 2 36.67 12.5 8.653 1 90.64 ? C34 3PE 300 A 1 HETATM 18 C C35 3PE . . . D 2 35.483 12.681 8.158 1 88.91 ? C35 3PE 300 A 1 HETATM 19 C C36 3PE . . . D 2 35.374 14.189 8.046 1 86.81 ? C36 3PE 300 A 1 HETATM 20 C C37 3PE . . . D 2 34.486 14.889 9.054 1 84.62 ? C37 3PE 300 A 1 HETATM 21 C C38 3PE . . . D 2 34.537 16.392 8.745 1 84.58 ? C38 3PE 300 A 1 HETATM 22 C C39 3PE . . . D 2 33.874 17.373 9.711 1 82.57 ? C39 3PE 300 A 1 HETATM 23 C C3A 3PE . . . D 2 33.775 18.74 9.039 1 80.92 ? C3A 3PE 300 A 1 HETATM 24 C C3B 3PE . . . D 2 32.756 19.77 9.583 1 79.91 ? C3B 3PE 300 A 1 HETATM 25 C C3C 3PE . . . D 2 31.484 19.906 8.796 1 79.55 ? C3C 3PE 300 A 1 HETATM 26 C C3D 3PE . . . D 2 30.832 21.235 9.112 1 78.85 ? C3D 3PE 300 A 1 HETATM 27 C C3E 3PE . . . D 2 29.535 21.403 8.331 1 78.06 ? C3E 3PE 300 A 1 HETATM 28 O O21 3PE . . . D 2 32.746 10.508 9.925 1 95.91 ? O21 3PE 300 A 1 HETATM 29 O O22 3PE . . . D 2 30.838 10.905 11.019 1 94.31 ? O22 3PE 300 A 1 HETATM 30 C C21 3PE . . . D 2 31.879 11.299 10.576 1 93.34 ? C21 3PE 300 A 1 HETATM 31 C C22 3PE . . . D 2 32.371 12.182 11.714 1 89.35 ? C22 3PE 300 A 1 HETATM 32 C C23 3PE . . . D 2 33.453 12.22 12.967 1 85.95 ? C23 3PE 300 A 1 HETATM 33 C C24 3PE . . . D 2 33.558 13.418 13.888 1 82.79 ? C24 3PE 300 A 1 HETATM 34 C C25 3PE . . . D 2 32.317 13.525 14.751 1 80.11 ? C25 3PE 300 A 1 HETATM 35 C C26 3PE . . . D 2 32.377 14.721 15.681 1 78.02 ? C26 3PE 300 A 1 HETATM 36 C C27 3PE . . . D 2 31.245 15.697 15.644 1 77.83 ? C27 3PE 300 A 1 HETATM 37 C C28 3PE . . . D 2 32.247 16.733 15.256 1 77.56 ? C28 3PE 300 A 1 HETATM 38 C C29 3PE . . . D 2 31.982 18.25 15.486 1 76.56 ? C29 3PE 300 A 1 HETATM 39 C C2A 3PE . . . D 2 32.508 19.197 14.361 1 73.85 ? C2A 3PE 300 A 1 HETATM 40 C C2B 3PE . . . D 2 34.094 19.109 13.81 1 70.38 ? C2B 3PE 300 A 1 HETATM 41 C C2C 3PE . . . D 2 35.531 19.549 13.577 1 67.77 ? C2C 3PE 300 A 1 HETATM 42 C C2D 3PE . . . D 2 36.408 18.867 14.601 1 64.52 ? C2D 3PE 300 A 1 HETATM 43 C C2E 3PE . . . D 2 37.883 19.176 14.653 1 61.95 ? C2E 3PE 300 A 1 HETATM 44 C C2F 3PE . . . D 2 39.051 18.356 14.214 1 60.33 ? C2F 3PE 300 A 1 HETATM 45 C C2G 3PE . . . D 2 40.552 18.412 14.153 1 60.7 ? C2G 3PE 300 A 1 HETATM 46 C C2H 3PE . . . D 2 41.264 17.222 13.57 1 59.63 ? C2H 3PE 300 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 341 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 46 #