data_1N95 # _model_server_result.job_id 5eJ-cWGpRd0AM43dmIYbtw _model_server_result.datetime_utc '2024-10-19 12:37:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1n95 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1001}' # _entry.id 1N95 # _exptl.entry_id 1N95 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 500.594 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[2-(4-CYANO-BENZYLAMINO)-3-(3-METHYL-3H-IMIDAZOL-4-YL)-PROPIONYL]-5-NAPHTHALEN-1-YL-1,2,3,6-TETRAHYDRO-PYRIDINE-4-CARBONITRILE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1N95 _cell.length_a 171.126 _cell.length_b 171.126 _cell.length_c 69.404 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1N95 _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B OD1 ASP 276 B ASP 297 1_555 C ZN ZN . B ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? metalc ? metalc2 B OD2 ASP 276 B ASP 297 1_555 C ZN ZN . B ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? metalc ? metalc3 B SG CYS 278 B CYS 299 1_555 C ZN ZN . B ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? metalc ? metalc4 B NE2 HIS 341 B HIS 362 1_555 C ZN ZN . B ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc5 C ZN ZN . B ZN 500 1_555 E N4 FTH . B FTH 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.703 ? # _chem_comp.formula 'C31 H28 N6 O' _chem_comp.formula_weight 500.594 _chem_comp.id FTH _chem_comp.mon_nstd_flag . _chem_comp.name 1-[2-(4-CYANO-BENZYLAMINO)-3-(3-METHYL-3H-IMIDAZOL-4-YL)-PROPIONYL]-5-NAPHTHALEN-1-YL-1,2,3,6-TETRAHYDRO-PYRIDINE-4-CARBONITRILE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N2 FTH sing 83 n n C1 HC11 FTH sing 84 n n C1 HC1A FTH sing 85 n n C1 HC1B FTH sing 86 n n N2 C3 FTH sing 87 n y N2 C6 FTH sing 88 n y C3 N4 FTH doub 89 n y C3 HC3 FTH sing 90 n n N4 C5 FTH sing 91 n y C5 C6 FTH doub 92 n y C5 HC5 FTH sing 93 n n C6 C7 FTH sing 94 n n C7 C8 FTH sing 95 n n C7 HC71 FTH sing 96 n n C7 HC72 FTH sing 97 n n C8 N9 FTH sing 98 n n C8 C19 FTH sing 99 n n C8 HC8 FTH sing 100 n n N9 C10 FTH sing 101 n n N9 HN9 FTH sing 102 n n C10 C11 FTH sing 103 n n C10 H101 FTH sing 104 n n C10 H102 FTH sing 105 n n C11 C12 FTH doub 106 n y C11 C18 FTH sing 107 n y C12 C13 FTH sing 108 n y C12 HC12 FTH sing 109 n n C13 C14 FTH doub 110 n y C13 HC13 FTH sing 111 n n C14 C15 FTH sing 112 n n C14 C17 FTH sing 113 n y C15 N16 FTH trip 114 n n C17 C18 FTH doub 115 n y C17 HC17 FTH sing 116 n n C18 HC18 FTH sing 117 n n C19 O20 FTH doub 118 n n C19 N21 FTH sing 119 n n N21 C22 FTH sing 120 n n N21 C26 FTH sing 121 n n C22 C23 FTH sing 122 n n C22 H221 FTH sing 123 n n C22 H222 FTH sing 124 n n C23 C24 FTH sing 125 n n C23 H231 FTH sing 126 n n C23 H232 FTH sing 127 n n C24 C25 FTH doub 128 n n C24 C37 FTH sing 129 n n C25 C26 FTH sing 130 n n C25 C27 FTH sing 131 n n C26 H261 FTH sing 132 n n C26 H262 FTH sing 133 n n C27 C28 FTH doub 134 n y C27 C36 FTH sing 135 n y C28 C29 FTH sing 136 n y C28 HC28 FTH sing 137 n n C29 C30 FTH doub 138 n y C29 HC29 FTH sing 139 n n C30 C31 FTH sing 140 n y C30 HC30 FTH sing 141 n n C31 C32 FTH doub 142 n y C31 C36 FTH sing 143 n y C32 C33 FTH sing 144 n y C32 HC32 FTH sing 145 n n C33 C34 FTH doub 146 n y C33 HC33 FTH sing 147 n n C34 C35 FTH sing 148 n y C34 HC34 FTH sing 149 n n C35 C36 FTH doub 150 n y C35 HC35 FTH sing 151 n n C37 N38 FTH trip 152 n n # _atom_sites.entry_id 1N95 _atom_sites.fract_transf_matrix[1][1] 0.005844 _atom_sites.fract_transf_matrix[1][2] 0.003374 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006748 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014408 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN B 1 500 500 ZN ZNK . D 4 HFP B 1 501 501 HFP HFP . E 5 FTH B 1 1001 1001 FTH FT3 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 FTH . . . E 5 46.601 46.438 -3.414 1 30 ? C1 FTH 1001 B 1 HETATM 2 N N2 FTH . . . E 5 47.947 46.941 -3.743 1 30 ? N2 FTH 1001 B 1 HETATM 3 C C3 FTH . . . E 5 48.627 46.763 -4.879 1 30 ? C3 FTH 1001 B 1 HETATM 4 N N4 FTH . . . E 5 49.822 47.341 -4.872 1 30 ? N4 FTH 1001 B 1 HETATM 5 C C5 FTH . . . E 5 49.943 47.917 -3.695 1 30 ? C5 FTH 1001 B 1 HETATM 6 C C6 FTH . . . E 5 48.77 47.673 -2.974 1 30 ? C6 FTH 1001 B 1 HETATM 7 C C7 FTH . . . E 5 48.347 48.103 -1.551 1 30 ? C7 FTH 1001 B 1 HETATM 8 C C8 FTH . . . E 5 49.476 48.578 -0.605 1 30 ? C8 FTH 1001 B 1 HETATM 9 N N9 FTH . . . E 5 49.986 49.845 -1.09 1 30 ? N9 FTH 1001 B 1 HETATM 10 C C10 FTH . . . E 5 49.601 51.027 -0.357 1 30 ? C10 FTH 1001 B 1 HETATM 11 C C11 FTH . . . E 5 49.647 52.248 -1.179 1 30 ? C11 FTH 1001 B 1 HETATM 12 C C12 FTH . . . E 5 50.77 53.113 -1.095 1 30 ? C12 FTH 1001 B 1 HETATM 13 C C13 FTH . . . E 5 50.812 54.289 -1.91 1 30 ? C13 FTH 1001 B 1 HETATM 14 C C14 FTH . . . E 5 49.733 54.572 -2.801 1 30 ? C14 FTH 1001 B 1 HETATM 15 C C15 FTH . . . E 5 49.789 55.746 -3.606 1 30 ? C15 FTH 1001 B 1 HETATM 16 N N16 FTH . . . E 5 49.803 56.724 -4.191 1 30 ? N16 FTH 1001 B 1 HETATM 17 C C17 FTH . . . E 5 48.604 53.713 -2.885 1 30 ? C17 FTH 1001 B 1 HETATM 18 C C18 FTH . . . E 5 48.568 52.546 -2.07 1 30 ? C18 FTH 1001 B 1 HETATM 19 C C19 FTH . . . E 5 50.582 47.472 -0.413 1 30 ? C19 FTH 1001 B 1 HETATM 20 O O20 FTH . . . E 5 50.493 46.335 -0.9 1 30 ? O20 FTH 1001 B 1 HETATM 21 N N21 FTH . . . E 5 51.593 47.763 0.406 1 30 ? N21 FTH 1001 B 1 HETATM 22 C C22 FTH . . . E 5 51.685 47.038 1.6 1 30 ? C22 FTH 1001 B 1 HETATM 23 C C23 FTH . . . E 5 53.021 46.985 2.238 1 30 ? C23 FTH 1001 B 1 HETATM 24 C C24 FTH . . . E 5 53.988 48.075 1.945 1 30 ? C24 FTH 1001 B 1 HETATM 25 C C25 FTH . . . E 5 53.751 48.99 0.965 1 30 ? C25 FTH 1001 B 1 HETATM 26 C C26 FTH . . . E 5 52.543 48.886 0.074 1 30 ? C26 FTH 1001 B 1 HETATM 27 C C27 FTH . . . E 5 54.685 50.094 0.765 1 30 ? C27 FTH 1001 B 1 HETATM 28 C C28 FTH . . . E 5 55.961 49.86 0.151 1 30 ? C28 FTH 1001 B 1 HETATM 29 C C29 FTH . . . E 5 56.875 50.933 -0.045 1 30 ? C29 FTH 1001 B 1 HETATM 30 C C30 FTH . . . E 5 56.565 52.234 0.376 1 30 ? C30 FTH 1001 B 1 HETATM 31 C C31 FTH . . . E 5 55.312 52.486 0.994 1 30 ? C31 FTH 1001 B 1 HETATM 32 C C32 FTH . . . E 5 55.001 53.808 1.407 1 30 ? C32 FTH 1001 B 1 HETATM 33 C C33 FTH . . . E 5 53.743 54.084 2.011 1 30 ? C33 FTH 1001 B 1 HETATM 34 C C34 FTH . . . E 5 52.788 53.052 2.21 1 30 ? C34 FTH 1001 B 1 HETATM 35 C C35 FTH . . . E 5 53.076 51.73 1.814 1 30 ? C35 FTH 1001 B 1 HETATM 36 C C36 FTH . . . E 5 54.357 51.417 1.21 1 30 ? C36 FTH 1001 B 1 HETATM 37 C C37 FTH . . . E 5 55.133 48.151 2.85 1 30 ? C37 FTH 1001 B 1 HETATM 38 N N38 FTH . . . E 5 56.14 48.162 3.445 1 30 ? N38 FTH 1001 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 38 #