data_1NA0 # _model_server_result.job_id eZxkVG1b5YCPagywhZCynQ _model_server_result.datetime_utc '2024-12-25 14:07:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1na0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":275}' # _entry.id 1NA0 # _exptl.entry_id 1NA0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 207.2 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'LEAD (II) ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.11 _cell.angle_gamma 90 _cell.entry_id 1NA0 _cell.length_a 102.734 _cell.length_b 46.56 _cell.length_c 52.517 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NA0 _symmetry.cell_setting monoclinic _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,O 1 1 B,E,F,G,H,I,J,K,L,M,N,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 F N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 30 A GLU 30 1_565 F PB PB . B PB 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.656 ? metalc ? metalc2 A OD1 ASP 60 A ASP 60 2_656 K MG MG . B MG 386 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc3 A OE2 GLU 61 A GLU 61 1_555 D PB PB . A PB 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc4 A OE1 GLU 64 A GLU 64 1_555 D PB PB . A PB 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.219 ? metalc ? metalc5 A OE1 GLU 98 A GLU 98 1_555 C PB PB . A PB 275 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.453 ? metalc ? metalc6 A OH TYR 99 A TYR 99 1_555 C PB PB . A PB 275 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? metalc ? metalc7 D PB PB . A PB 278 1_555 O O HOH . A HOH 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.625 ? metalc ? metalc8 O O HOH . A HOH 387 2_656 K MG MG . B MG 386 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.93 ? metalc ? metalc9 O O HOH . A HOH 453 2_656 K MG MG . B MG 386 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.747 ? metalc ? metalc10 B OE2 GLU 30 B GLU 30 1_555 F PB PB . B PB 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc11 B OE1 GLU 30 B GLU 30 1_555 F PB PB . B PB 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.461 ? metalc ? metalc12 B NE2 GLN 56 B GLN 56 1_555 H PB PB . B PB 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.037 ? metalc ? metalc13 B OD1 ASP 58 B ASP 58 1_555 H PB PB . B PB 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.418 ? metalc ? metalc14 B OD2 ASP 58 B ASP 58 1_555 H PB PB . B PB 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? metalc ? metalc15 B OE1 GLU 95 B GLU 95 1_555 G PB PB . B PB 276 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc16 B OE2 GLU 95 B GLU 95 1_555 G PB PB . B PB 276 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.194 ? metalc ? metalc17 P O HOH . B HOH 308 1_555 L NA NA . B NA 435 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.71 ? metalc ? metalc18 P O HOH . B HOH 311 1_555 L NA NA . B NA 435 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.789 ? metalc ? metalc19 P O HOH . B HOH 316 1_555 J NA NA . B NA 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? metalc ? metalc20 J NA NA . B NA 320 1_555 P O HOH . B HOH 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.839 ? metalc ? metalc21 J NA NA . B NA 320 1_555 P O HOH . B HOH 434 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.831 ? metalc ? metalc22 P O HOH . B HOH 321 1_555 L NA NA . B NA 435 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.795 ? metalc ? metalc23 P O HOH . B HOH 333 1_555 L NA NA . B NA 435 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.803 ? metalc ? metalc24 K MG MG . B MG 386 1_555 P O HOH . B HOH 455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? metalc ? metalc25 K MG MG . B MG 386 1_555 P O HOH . B HOH 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? # _chem_comp.formula 'Pb 2' _chem_comp.formula_weight 207.2 _chem_comp.id PB _chem_comp.mon_nstd_flag . _chem_comp.name 'LEAD (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1NA0 _atom_sites.fract_transf_matrix[1][1] 0.009734 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001561 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021478 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019285 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PB A 1 275 275 PB PB . D 2 PB A 1 278 278 PB PB . E 3 ACT B 1 207 207 ACT ACT . F 2 PB B 1 274 274 PB PB . G 2 PB B 1 276 276 PB PB . H 2 PB B 1 277 277 PB PB . I 4 CL B 1 300 300 CL CL . J 5 NA B 1 320 320 NA NA . K 6 MG B 1 386 386 MG MG . L 5 NA B 1 435 435 NA NA . M 7 IPT B 1 200 200 IPT IPT . N 7 IPT B 1 206 206 IPT IPT . O 8 HOH A 1 281 281 HOH HOH . O 8 HOH A 2 303 303 HOH HOH . O 8 HOH A 3 306 306 HOH HOH . O 8 HOH A 4 307 307 HOH HOH . O 8 HOH A 5 309 309 HOH HOH . O 8 HOH A 6 312 312 HOH HOH . O 8 HOH A 7 314 314 HOH HOH . O 8 HOH A 8 315 315 HOH HOH . O 8 HOH A 9 318 318 HOH HOH . O 8 HOH A 10 319 319 HOH HOH . O 8 HOH A 11 324 324 HOH HOH . O 8 HOH A 12 325 325 HOH HOH . O 8 HOH A 13 326 326 HOH HOH . O 8 HOH A 14 327 327 HOH HOH . O 8 HOH A 15 329 329 HOH HOH . O 8 HOH A 16 330 330 HOH HOH . O 8 HOH A 17 331 331 HOH HOH . O 8 HOH A 18 332 332 HOH HOH . O 8 HOH A 19 335 335 HOH HOH . O 8 HOH A 20 336 336 HOH HOH . O 8 HOH A 21 337 337 HOH HOH . O 8 HOH A 22 339 339 HOH HOH . O 8 HOH A 23 341 341 HOH HOH . O 8 HOH A 24 342 342 HOH HOH . O 8 HOH A 25 343 343 HOH HOH . O 8 HOH A 26 344 344 HOH HOH . O 8 HOH A 27 351 351 HOH HOH . O 8 HOH A 28 352 352 HOH HOH . O 8 HOH A 29 353 353 HOH HOH . O 8 HOH A 30 354 354 HOH HOH . O 8 HOH A 31 356 356 HOH HOH . O 8 HOH A 32 357 357 HOH HOH . O 8 HOH A 33 358 358 HOH HOH . O 8 HOH A 34 361 361 HOH HOH . O 8 HOH A 35 365 365 HOH HOH . O 8 HOH A 36 367 367 HOH HOH . O 8 HOH A 37 368 368 HOH HOH . O 8 HOH A 38 372 372 HOH HOH . O 8 HOH A 39 373 373 HOH HOH . O 8 HOH A 40 374 374 HOH HOH . O 8 HOH A 41 375 375 HOH HOH . O 8 HOH A 42 376 376 HOH HOH . O 8 HOH A 43 377 377 HOH HOH . O 8 HOH A 44 382 382 HOH HOH . O 8 HOH A 45 384 384 HOH HOH . O 8 HOH A 46 385 385 HOH HOH . O 8 HOH A 47 387 387 HOH HOH . O 8 HOH A 48 388 388 HOH HOH . O 8 HOH A 49 389 389 HOH HOH . O 8 HOH A 50 390 390 HOH HOH . O 8 HOH A 51 391 391 HOH HOH . O 8 HOH A 52 394 394 HOH HOH . O 8 HOH A 53 397 397 HOH HOH . O 8 HOH A 54 409 409 HOH HOH . O 8 HOH A 55 414 414 HOH HOH . O 8 HOH A 56 417 417 HOH HOH . O 8 HOH A 57 418 418 HOH HOH . O 8 HOH A 58 419 419 HOH HOH . O 8 HOH A 59 420 420 HOH HOH . O 8 HOH A 60 421 421 HOH HOH . O 8 HOH A 61 422 422 HOH HOH . O 8 HOH A 62 423 423 HOH HOH . O 8 HOH A 63 424 424 HOH HOH . O 8 HOH A 64 425 425 HOH HOH . O 8 HOH A 65 426 426 HOH HOH . O 8 HOH A 66 427 427 HOH HOH . O 8 HOH A 67 428 428 HOH HOH . O 8 HOH A 68 439 439 HOH HOH . O 8 HOH A 69 453 453 HOH HOH . O 8 HOH A 70 456 456 HOH HOH . O 8 HOH A 71 457 457 HOH HOH . O 8 HOH A 72 460 460 HOH HOH . O 8 HOH A 73 466 466 HOH HOH . O 8 HOH A 74 468 468 HOH HOH . O 8 HOH A 75 469 469 HOH HOH . O 8 HOH A 76 470 470 HOH HOH . O 8 HOH A 77 475 475 HOH HOH . P 8 HOH B 1 301 301 HOH HOH . P 8 HOH B 2 302 302 HOH HOH . P 8 HOH B 3 305 305 HOH HOH . P 8 HOH B 4 308 308 HOH HOH . P 8 HOH B 5 310 310 HOH HOH . P 8 HOH B 6 311 311 HOH HOH . P 8 HOH B 7 313 313 HOH HOH . P 8 HOH B 8 316 316 HOH HOH . P 8 HOH B 9 317 317 HOH HOH . P 8 HOH B 10 321 321 HOH HOH . P 8 HOH B 11 322 322 HOH HOH . P 8 HOH B 12 323 323 HOH HOH . P 8 HOH B 13 328 328 HOH HOH . P 8 HOH B 14 333 333 HOH HOH . P 8 HOH B 15 334 334 HOH HOH . P 8 HOH B 16 338 338 HOH HOH . P 8 HOH B 17 340 340 HOH HOH . P 8 HOH B 18 345 345 HOH HOH . P 8 HOH B 19 346 346 HOH HOH . P 8 HOH B 20 347 347 HOH HOH . P 8 HOH B 21 348 348 HOH HOH . P 8 HOH B 22 349 349 HOH HOH . P 8 HOH B 23 350 350 HOH HOH . P 8 HOH B 24 355 355 HOH HOH . P 8 HOH B 25 359 359 HOH HOH . P 8 HOH B 26 360 360 HOH HOH . P 8 HOH B 27 362 362 HOH HOH . P 8 HOH B 28 363 363 HOH HOH . P 8 HOH B 29 364 364 HOH HOH . P 8 HOH B 30 366 366 HOH HOH . P 8 HOH B 31 369 369 HOH HOH . P 8 HOH B 32 370 370 HOH HOH . P 8 HOH B 33 371 371 HOH HOH . P 8 HOH B 34 378 378 HOH HOH . P 8 HOH B 35 380 380 HOH HOH . P 8 HOH B 36 381 381 HOH HOH . P 8 HOH B 37 383 383 HOH HOH . P 8 HOH B 38 393 393 HOH HOH . P 8 HOH B 39 400 400 HOH HOH . P 8 HOH B 40 401 401 HOH HOH . P 8 HOH B 41 403 403 HOH HOH . P 8 HOH B 42 404 404 HOH HOH . P 8 HOH B 43 410 410 HOH HOH . P 8 HOH B 44 411 411 HOH HOH . P 8 HOH B 45 413 413 HOH HOH . P 8 HOH B 46 415 415 HOH HOH . P 8 HOH B 47 429 429 HOH HOH . P 8 HOH B 48 430 430 HOH HOH . P 8 HOH B 49 431 431 HOH HOH . P 8 HOH B 50 432 432 HOH HOH . P 8 HOH B 51 433 433 HOH HOH . P 8 HOH B 52 434 434 HOH HOH . P 8 HOH B 53 436 436 HOH HOH . P 8 HOH B 54 437 437 HOH HOH . P 8 HOH B 55 438 438 HOH HOH . P 8 HOH B 56 440 440 HOH HOH . P 8 HOH B 57 441 441 HOH HOH . P 8 HOH B 58 442 442 HOH HOH . P 8 HOH B 59 443 443 HOH HOH . P 8 HOH B 60 444 444 HOH HOH . P 8 HOH B 61 445 445 HOH HOH . P 8 HOH B 62 446 446 HOH HOH . P 8 HOH B 63 447 447 HOH HOH . P 8 HOH B 64 448 448 HOH HOH . P 8 HOH B 65 449 449 HOH HOH . P 8 HOH B 66 450 450 HOH HOH . P 8 HOH B 67 452 452 HOH HOH . P 8 HOH B 68 454 454 HOH HOH . P 8 HOH B 69 455 455 HOH HOH . P 8 HOH B 70 459 459 HOH HOH . P 8 HOH B 71 461 461 HOH HOH . P 8 HOH B 72 462 462 HOH HOH . P 8 HOH B 73 463 463 HOH HOH . P 8 HOH B 74 464 464 HOH HOH . P 8 HOH B 75 465 465 HOH HOH . P 8 HOH B 76 467 467 HOH HOH . P 8 HOH B 77 471 471 HOH HOH . P 8 HOH B 78 472 472 HOH HOH . P 8 HOH B 79 473 473 HOH HOH . P 8 HOH B 80 474 474 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol PB _atom_site.label_atom_id PB _atom_site.label_comp_id PB _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 25.757 _atom_site.Cartn_y 14.045 _atom_site.Cartn_z 17.314 _atom_site.occupancy 0.25 _atom_site.B_iso_or_equiv 59.61 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id PB _atom_site.auth_comp_id PB _atom_site.auth_seq_id 275 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 403 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #