data_1NA0
#
_model_server_result.job_id            1m_wC9rUpID3EHKI1gqcVQ 
_model_server_result.datetime_utc      '2024-12-25 14:01:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1na0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":320}' 
#
_entry.id    1NA0 
#
_exptl.entry_id    1NA0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          99.11 
_cell.angle_gamma         90 
_cell.entry_id            1NA0 
_cell.length_a            102.734 
_cell.length_b            46.56 
_cell.length_c            52.517 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1NA0 
_symmetry.cell_setting             monoclinic 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,O 1 1 
B,E,F,G,H,I,J,K,L,M,N,P 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 J N N 
? 5 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE2 GLU 30 A GLU 30 1_565 F PB PB . B PB 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.656 ? 
metalc ? metalc2 A OD1 ASP 60 A ASP 60 2_656 K MG MG . B MG 386 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? 
metalc ? metalc3 A OE2 GLU 61 A GLU 61 1_555 D PB PB . A PB 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? 
metalc ? metalc4 A OE1 GLU 64 A GLU 64 1_555 D PB PB . A PB 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.219 ? 
metalc ? metalc5 A OE1 GLU 98 A GLU 98 1_555 C PB PB . A PB 275 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.453 ? 
metalc ? metalc6 A OH TYR 99 A TYR 99 1_555 C PB PB . A PB 275 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? 
metalc ? metalc7 D PB PB . A PB 278 1_555 O O HOH . A HOH 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.625 ? 
metalc ? metalc8 O O HOH . A HOH 387 2_656 K MG MG . B MG 386 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.93 ? 
metalc ? metalc9 O O HOH . A HOH 453 2_656 K MG MG . B MG 386 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.747 ? 
metalc ? metalc10 B OE2 GLU 30 B GLU 30 1_555 F PB PB . B PB 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? 
metalc ? metalc11 B OE1 GLU 30 B GLU 30 1_555 F PB PB . B PB 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.461 ? 
metalc ? metalc12 B NE2 GLN 56 B GLN 56 1_555 H PB PB . B PB 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.037 ? 
metalc ? metalc13 B OD1 ASP 58 B ASP 58 1_555 H PB PB . B PB 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.418 ? 
metalc ? metalc14 B OD2 ASP 58 B ASP 58 1_555 H PB PB . B PB 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? 
metalc ? metalc15 B OE1 GLU 95 B GLU 95 1_555 G PB PB . B PB 276 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? 
metalc ? metalc16 B OE2 GLU 95 B GLU 95 1_555 G PB PB . B PB 276 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.194 ? 
metalc ? metalc17 P O HOH . B HOH 308 1_555 L NA NA . B NA 435 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.71 ? 
metalc ? metalc18 P O HOH . B HOH 311 1_555 L NA NA . B NA 435 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.789 ? 
metalc ? metalc19 P O HOH . B HOH 316 1_555 J NA NA . B NA 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? 
metalc ? metalc20 J NA NA . B NA 320 1_555 P O HOH . B HOH 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.839 ? 
metalc ? metalc21 J NA NA . B NA 320 1_555 P O HOH . B HOH 434 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.831 ? 
metalc ? metalc22 P O HOH . B HOH 321 1_555 L NA NA . B NA 435 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.795 ? 
metalc ? metalc23 P O HOH . B HOH 333 1_555 L NA NA . B NA 435 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.803 ? 
metalc ? metalc24 K MG MG . B MG 386 1_555 P O HOH . B HOH 455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? 
metalc ? metalc25 K MG MG . B MG 386 1_555 P O HOH . B HOH 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1NA0 
_atom_sites.fract_transf_matrix[1][1]    0.009734 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001561 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.021478 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019285 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 PB A 1 275 275 PB PB . 
D 2 PB A 1 278 278 PB PB . 
E 3 ACT B 1 207 207 ACT ACT . 
F 2 PB B 1 274 274 PB PB . 
G 2 PB B 1 276 276 PB PB . 
H 2 PB B 1 277 277 PB PB . 
I 4 CL B 1 300 300 CL CL . 
J 5 NA B 1 320 320 NA NA . 
K 6 MG B 1 386 386 MG MG . 
L 5 NA B 1 435 435 NA NA . 
M 7 IPT B 1 200 200 IPT IPT . 
N 7 IPT B 1 206 206 IPT IPT . 
O 8 HOH A 1 281 281 HOH HOH . 
O 8 HOH A 2 303 303 HOH HOH . 
O 8 HOH A 3 306 306 HOH HOH . 
O 8 HOH A 4 307 307 HOH HOH . 
O 8 HOH A 5 309 309 HOH HOH . 
O 8 HOH A 6 312 312 HOH HOH . 
O 8 HOH A 7 314 314 HOH HOH . 
O 8 HOH A 8 315 315 HOH HOH . 
O 8 HOH A 9 318 318 HOH HOH . 
O 8 HOH A 10 319 319 HOH HOH . 
O 8 HOH A 11 324 324 HOH HOH . 
O 8 HOH A 12 325 325 HOH HOH . 
O 8 HOH A 13 326 326 HOH HOH . 
O 8 HOH A 14 327 327 HOH HOH . 
O 8 HOH A 15 329 329 HOH HOH . 
O 8 HOH A 16 330 330 HOH HOH . 
O 8 HOH A 17 331 331 HOH HOH . 
O 8 HOH A 18 332 332 HOH HOH . 
O 8 HOH A 19 335 335 HOH HOH . 
O 8 HOH A 20 336 336 HOH HOH . 
O 8 HOH A 21 337 337 HOH HOH . 
O 8 HOH A 22 339 339 HOH HOH . 
O 8 HOH A 23 341 341 HOH HOH . 
O 8 HOH A 24 342 342 HOH HOH . 
O 8 HOH A 25 343 343 HOH HOH . 
O 8 HOH A 26 344 344 HOH HOH . 
O 8 HOH A 27 351 351 HOH HOH . 
O 8 HOH A 28 352 352 HOH HOH . 
O 8 HOH A 29 353 353 HOH HOH . 
O 8 HOH A 30 354 354 HOH HOH . 
O 8 HOH A 31 356 356 HOH HOH . 
O 8 HOH A 32 357 357 HOH HOH . 
O 8 HOH A 33 358 358 HOH HOH . 
O 8 HOH A 34 361 361 HOH HOH . 
O 8 HOH A 35 365 365 HOH HOH . 
O 8 HOH A 36 367 367 HOH HOH . 
O 8 HOH A 37 368 368 HOH HOH . 
O 8 HOH A 38 372 372 HOH HOH . 
O 8 HOH A 39 373 373 HOH HOH . 
O 8 HOH A 40 374 374 HOH HOH . 
O 8 HOH A 41 375 375 HOH HOH . 
O 8 HOH A 42 376 376 HOH HOH . 
O 8 HOH A 43 377 377 HOH HOH . 
O 8 HOH A 44 382 382 HOH HOH . 
O 8 HOH A 45 384 384 HOH HOH . 
O 8 HOH A 46 385 385 HOH HOH . 
O 8 HOH A 47 387 387 HOH HOH . 
O 8 HOH A 48 388 388 HOH HOH . 
O 8 HOH A 49 389 389 HOH HOH . 
O 8 HOH A 50 390 390 HOH HOH . 
O 8 HOH A 51 391 391 HOH HOH . 
O 8 HOH A 52 394 394 HOH HOH . 
O 8 HOH A 53 397 397 HOH HOH . 
O 8 HOH A 54 409 409 HOH HOH . 
O 8 HOH A 55 414 414 HOH HOH . 
O 8 HOH A 56 417 417 HOH HOH . 
O 8 HOH A 57 418 418 HOH HOH . 
O 8 HOH A 58 419 419 HOH HOH . 
O 8 HOH A 59 420 420 HOH HOH . 
O 8 HOH A 60 421 421 HOH HOH . 
O 8 HOH A 61 422 422 HOH HOH . 
O 8 HOH A 62 423 423 HOH HOH . 
O 8 HOH A 63 424 424 HOH HOH . 
O 8 HOH A 64 425 425 HOH HOH . 
O 8 HOH A 65 426 426 HOH HOH . 
O 8 HOH A 66 427 427 HOH HOH . 
O 8 HOH A 67 428 428 HOH HOH . 
O 8 HOH A 68 439 439 HOH HOH . 
O 8 HOH A 69 453 453 HOH HOH . 
O 8 HOH A 70 456 456 HOH HOH . 
O 8 HOH A 71 457 457 HOH HOH . 
O 8 HOH A 72 460 460 HOH HOH . 
O 8 HOH A 73 466 466 HOH HOH . 
O 8 HOH A 74 468 468 HOH HOH . 
O 8 HOH A 75 469 469 HOH HOH . 
O 8 HOH A 76 470 470 HOH HOH . 
O 8 HOH A 77 475 475 HOH HOH . 
P 8 HOH B 1 301 301 HOH HOH . 
P 8 HOH B 2 302 302 HOH HOH . 
P 8 HOH B 3 305 305 HOH HOH . 
P 8 HOH B 4 308 308 HOH HOH . 
P 8 HOH B 5 310 310 HOH HOH . 
P 8 HOH B 6 311 311 HOH HOH . 
P 8 HOH B 7 313 313 HOH HOH . 
P 8 HOH B 8 316 316 HOH HOH . 
P 8 HOH B 9 317 317 HOH HOH . 
P 8 HOH B 10 321 321 HOH HOH . 
P 8 HOH B 11 322 322 HOH HOH . 
P 8 HOH B 12 323 323 HOH HOH . 
P 8 HOH B 13 328 328 HOH HOH . 
P 8 HOH B 14 333 333 HOH HOH . 
P 8 HOH B 15 334 334 HOH HOH . 
P 8 HOH B 16 338 338 HOH HOH . 
P 8 HOH B 17 340 340 HOH HOH . 
P 8 HOH B 18 345 345 HOH HOH . 
P 8 HOH B 19 346 346 HOH HOH . 
P 8 HOH B 20 347 347 HOH HOH . 
P 8 HOH B 21 348 348 HOH HOH . 
P 8 HOH B 22 349 349 HOH HOH . 
P 8 HOH B 23 350 350 HOH HOH . 
P 8 HOH B 24 355 355 HOH HOH . 
P 8 HOH B 25 359 359 HOH HOH . 
P 8 HOH B 26 360 360 HOH HOH . 
P 8 HOH B 27 362 362 HOH HOH . 
P 8 HOH B 28 363 363 HOH HOH . 
P 8 HOH B 29 364 364 HOH HOH . 
P 8 HOH B 30 366 366 HOH HOH . 
P 8 HOH B 31 369 369 HOH HOH . 
P 8 HOH B 32 370 370 HOH HOH . 
P 8 HOH B 33 371 371 HOH HOH . 
P 8 HOH B 34 378 378 HOH HOH . 
P 8 HOH B 35 380 380 HOH HOH . 
P 8 HOH B 36 381 381 HOH HOH . 
P 8 HOH B 37 383 383 HOH HOH . 
P 8 HOH B 38 393 393 HOH HOH . 
P 8 HOH B 39 400 400 HOH HOH . 
P 8 HOH B 40 401 401 HOH HOH . 
P 8 HOH B 41 403 403 HOH HOH . 
P 8 HOH B 42 404 404 HOH HOH . 
P 8 HOH B 43 410 410 HOH HOH . 
P 8 HOH B 44 411 411 HOH HOH . 
P 8 HOH B 45 413 413 HOH HOH . 
P 8 HOH B 46 415 415 HOH HOH . 
P 8 HOH B 47 429 429 HOH HOH . 
P 8 HOH B 48 430 430 HOH HOH . 
P 8 HOH B 49 431 431 HOH HOH . 
P 8 HOH B 50 432 432 HOH HOH . 
P 8 HOH B 51 433 433 HOH HOH . 
P 8 HOH B 52 434 434 HOH HOH . 
P 8 HOH B 53 436 436 HOH HOH . 
P 8 HOH B 54 437 437 HOH HOH . 
P 8 HOH B 55 438 438 HOH HOH . 
P 8 HOH B 56 440 440 HOH HOH . 
P 8 HOH B 57 441 441 HOH HOH . 
P 8 HOH B 58 442 442 HOH HOH . 
P 8 HOH B 59 443 443 HOH HOH . 
P 8 HOH B 60 444 444 HOH HOH . 
P 8 HOH B 61 445 445 HOH HOH . 
P 8 HOH B 62 446 446 HOH HOH . 
P 8 HOH B 63 447 447 HOH HOH . 
P 8 HOH B 64 448 448 HOH HOH . 
P 8 HOH B 65 449 449 HOH HOH . 
P 8 HOH B 66 450 450 HOH HOH . 
P 8 HOH B 67 452 452 HOH HOH . 
P 8 HOH B 68 454 454 HOH HOH . 
P 8 HOH B 69 455 455 HOH HOH . 
P 8 HOH B 70 459 459 HOH HOH . 
P 8 HOH B 71 461 461 HOH HOH . 
P 8 HOH B 72 462 462 HOH HOH . 
P 8 HOH B 73 463 463 HOH HOH . 
P 8 HOH B 74 464 464 HOH HOH . 
P 8 HOH B 75 465 465 HOH HOH . 
P 8 HOH B 76 467 467 HOH HOH . 
P 8 HOH B 77 471 471 HOH HOH . 
P 8 HOH B 78 472 472 HOH HOH . 
P 8 HOH B 79 473 473 HOH HOH . 
P 8 HOH B 80 474 474 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         J 
_atom_site.label_entity_id       5 
_atom_site.Cartn_x               66.137 
_atom_site.Cartn_y               20.66 
_atom_site.Cartn_z               14.553 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        36.01 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           320 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           446 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#