data_1NAV # _model_server_result.job_id D76oPYAgidJMW3zsa-FLcw _model_server_result.datetime_utc '2024-11-14 13:17:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1nav # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":500}' # _entry.id 1NAV # _exptl.entry_id 1NAV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1NAV _cell.length_a 109.319 _cell.length_b 109.319 _cell.length_c 134.652 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NAV _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 330 n n S O2 SO4 doub 331 n n S O3 SO4 sing 332 n n S O4 SO4 sing 333 n n # _atom_sites.entry_id 1NAV _atom_sites.fract_transf_matrix[1][1] 0.009148 _atom_sites.fract_transf_matrix[1][2] 0.005281 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010563 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007427 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 500 500 SO4 SO4 . C 3 IH5 A 1 600 600 IH5 INH . D 4 HOH A 1 701 701 HOH WAT . D 4 HOH A 2 702 702 HOH WAT . D 4 HOH A 3 703 703 HOH WAT . D 4 HOH A 4 704 704 HOH WAT . D 4 HOH A 5 705 705 HOH WAT . D 4 HOH A 6 706 706 HOH WAT . D 4 HOH A 7 707 707 HOH WAT . D 4 HOH A 8 708 708 HOH WAT . D 4 HOH A 9 709 709 HOH WAT . D 4 HOH A 10 710 710 HOH WAT . D 4 HOH A 11 711 711 HOH WAT . D 4 HOH A 12 712 712 HOH WAT . D 4 HOH A 13 713 713 HOH WAT . D 4 HOH A 14 714 714 HOH WAT . D 4 HOH A 15 715 715 HOH WAT . D 4 HOH A 16 716 716 HOH WAT . D 4 HOH A 17 717 717 HOH WAT . D 4 HOH A 18 718 718 HOH WAT . D 4 HOH A 19 719 719 HOH WAT . D 4 HOH A 20 720 720 HOH WAT . D 4 HOH A 21 721 721 HOH WAT . D 4 HOH A 22 722 722 HOH WAT . D 4 HOH A 23 723 723 HOH WAT . D 4 HOH A 24 724 724 HOH WAT . D 4 HOH A 25 725 725 HOH WAT . D 4 HOH A 26 726 726 HOH WAT . D 4 HOH A 27 727 727 HOH WAT . D 4 HOH A 28 728 728 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . B 2 42.052 -6.327 40.519 1 77.81 ? S SO4 500 A 1 HETATM 2 O O1 SO4 . . . B 2 42.153 -6.327 39.046 1 77.23 ? O1 SO4 500 A 1 HETATM 3 O O2 SO4 . . . B 2 41.038 -5.349 40.955 1 79.37 ? O2 SO4 500 A 1 HETATM 4 O O3 SO4 . . . B 2 41.673 -7.669 40.991 1 79.51 ? O3 SO4 500 A 1 HETATM 5 O O4 SO4 . . . B 2 43.343 -5.965 41.115 1 78.96 ? O4 SO4 500 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #