data_1NE8 # _model_server_result.job_id V9N77Emlr6xRhVsdMW3tZg _model_server_result.datetime_utc '2025-07-05 03:48:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ne8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":503}' # _entry.id 1NE8 # _exptl.entry_id 1NE8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 252.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1NE8 _cell.length_a 56.63 _cell.length_b 56.63 _cell.length_c 138.257 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NE8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 28.315 49.043019 23.042833 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C11 H24 O6' _chem_comp.formula_weight 252.305 _chem_comp.id 1PG _chem_comp.mon_nstd_flag . _chem_comp.name 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 O1 1PG sing 1 n n C2 C3 1PG sing 2 n n C2 H21 1PG sing 3 n n C2 H22 1PG sing 4 n n C1 O1 1PG sing 5 n n C1 H11 1PG sing 6 n n C1 H12 1PG sing 7 n n C1 H13 1PG sing 8 n n O2 C3 1PG sing 9 n n O2 C4 1PG sing 10 n n C3 H31 1PG sing 11 n n C3 H32 1PG sing 12 n n C4 C5 1PG sing 13 n n C4 H41 1PG sing 14 n n C4 H42 1PG sing 15 n n C5 O3 1PG sing 16 n n C5 H51 1PG sing 17 n n C5 H52 1PG sing 18 n n O3 C6 1PG sing 19 n n C6 C7 1PG sing 20 n n C6 H61 1PG sing 21 n n C6 H62 1PG sing 22 n n C7 O4 1PG sing 23 n n C7 H71 1PG sing 24 n n C7 H72 1PG sing 25 n n O4 C8 1PG sing 26 n n C8 C9 1PG sing 27 n n C8 H81 1PG sing 28 n n C8 H82 1PG sing 29 n n C9 O5 1PG sing 30 n n C9 H91 1PG sing 31 n n C9 H92 1PG sing 32 n n O5 C10 1PG sing 33 n n C10 C11 1PG sing 34 n n C10 H101 1PG sing 35 n n C10 H102 1PG sing 36 n n C11 O6 1PG sing 37 n n C11 H111 1PG sing 38 n n C11 H112 1PG sing 39 n n O6 HO6 1PG sing 40 n n # _atom_sites.entry_id 1NE8 _atom_sites.fract_transf_matrix[1][1] 0.017658 _atom_sites.fract_transf_matrix[1][2] 0.010195 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02039 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007233 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 1PG A 1 501 501 1PG 1PG . C 2 1PG A 1 503 503 1PG 1PG . D 3 ACY A 1 502 502 ACY ACY . E 3 ACY A 1 504 504 ACY ACY . F 4 HOH A 1 505 1 HOH HOH . F 4 HOH A 2 506 2 HOH HOH . F 4 HOH A 3 507 3 HOH HOH . F 4 HOH A 4 508 4 HOH HOH . F 4 HOH A 5 509 5 HOH HOH . F 4 HOH A 6 510 6 HOH HOH . F 4 HOH A 7 511 7 HOH HOH . F 4 HOH A 8 512 8 HOH HOH . F 4 HOH A 9 513 9 HOH HOH . F 4 HOH A 10 514 10 HOH HOH . F 4 HOH A 11 515 11 HOH HOH . F 4 HOH A 12 516 12 HOH HOH . F 4 HOH A 13 517 13 HOH HOH . F 4 HOH A 14 518 14 HOH HOH . F 4 HOH A 15 519 15 HOH HOH . F 4 HOH A 16 520 16 HOH HOH . F 4 HOH A 17 521 17 HOH HOH . F 4 HOH A 18 522 18 HOH HOH . F 4 HOH A 19 523 19 HOH HOH . F 4 HOH A 20 524 20 HOH HOH . F 4 HOH A 21 525 21 HOH HOH . F 4 HOH A 22 526 22 HOH HOH . F 4 HOH A 23 527 23 HOH HOH . F 4 HOH A 24 528 24 HOH HOH . F 4 HOH A 25 529 25 HOH HOH . F 4 HOH A 26 530 26 HOH HOH . F 4 HOH A 27 531 27 HOH HOH . F 4 HOH A 28 532 28 HOH HOH . F 4 HOH A 29 533 29 HOH HOH . F 4 HOH A 30 534 30 HOH HOH . F 4 HOH A 31 535 31 HOH HOH . F 4 HOH A 32 536 32 HOH HOH . F 4 HOH A 33 537 33 HOH HOH . F 4 HOH A 34 538 34 HOH HOH . F 4 HOH A 35 539 35 HOH HOH . F 4 HOH A 36 540 36 HOH HOH . F 4 HOH A 37 541 37 HOH HOH . F 4 HOH A 38 542 38 HOH HOH . F 4 HOH A 39 543 39 HOH HOH . F 4 HOH A 40 544 40 HOH HOH . F 4 HOH A 41 545 41 HOH HOH . F 4 HOH A 42 546 42 HOH HOH . F 4 HOH A 43 547 43 HOH HOH . F 4 HOH A 44 548 44 HOH HOH . F 4 HOH A 45 549 45 HOH HOH . F 4 HOH A 46 550 46 HOH HOH . F 4 HOH A 47 551 47 HOH HOH . F 4 HOH A 48 552 48 HOH HOH . F 4 HOH A 49 553 49 HOH HOH . F 4 HOH A 50 554 50 HOH HOH . F 4 HOH A 51 555 51 HOH HOH . F 4 HOH A 52 556 52 HOH HOH . F 4 HOH A 53 557 53 HOH HOH . F 4 HOH A 54 558 54 HOH HOH . F 4 HOH A 55 559 55 HOH HOH . F 4 HOH A 56 560 56 HOH HOH . F 4 HOH A 57 561 57 HOH HOH . F 4 HOH A 58 562 58 HOH HOH . F 4 HOH A 59 563 59 HOH HOH . F 4 HOH A 60 564 60 HOH HOH . F 4 HOH A 61 565 61 HOH HOH . F 4 HOH A 62 566 62 HOH HOH . F 4 HOH A 63 567 63 HOH HOH . F 4 HOH A 64 568 64 HOH HOH . F 4 HOH A 65 569 65 HOH HOH . F 4 HOH A 66 570 66 HOH HOH . F 4 HOH A 67 571 67 HOH HOH . F 4 HOH A 68 572 68 HOH HOH . F 4 HOH A 69 573 69 HOH HOH . F 4 HOH A 70 574 70 HOH HOH . F 4 HOH A 71 575 71 HOH HOH . F 4 HOH A 72 576 72 HOH HOH . F 4 HOH A 73 577 73 HOH HOH . F 4 HOH A 74 578 74 HOH HOH . F 4 HOH A 75 579 75 HOH HOH . F 4 HOH A 76 580 76 HOH HOH . F 4 HOH A 77 581 77 HOH HOH . F 4 HOH A 78 582 78 HOH HOH . F 4 HOH A 79 583 79 HOH HOH . F 4 HOH A 80 584 80 HOH HOH . F 4 HOH A 81 585 81 HOH HOH . F 4 HOH A 82 586 82 HOH HOH . F 4 HOH A 83 587 83 HOH HOH . F 4 HOH A 84 588 84 HOH HOH . F 4 HOH A 85 589 85 HOH HOH . F 4 HOH A 86 590 86 HOH HOH . F 4 HOH A 87 591 87 HOH HOH . F 4 HOH A 88 592 88 HOH HOH . F 4 HOH A 89 593 89 HOH HOH . F 4 HOH A 90 594 90 HOH HOH . F 4 HOH A 91 595 91 HOH HOH . F 4 HOH A 92 596 92 HOH HOH . F 4 HOH A 93 597 93 HOH HOH . F 4 HOH A 94 598 94 HOH HOH . F 4 HOH A 95 599 95 HOH HOH . F 4 HOH A 96 600 96 HOH HOH . F 4 HOH A 97 601 97 HOH HOH . F 4 HOH A 98 602 98 HOH HOH . F 4 HOH A 99 603 99 HOH HOH . F 4 HOH A 100 604 100 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 1PG . . . C 2 -1.505 41.497 12.629 1 43.34 ? C2 1PG 503 A 1 HETATM 2 O O1 1PG . . . C 2 -2.595 40.992 11.846 1 44.47 ? O1 1PG 503 A 1 HETATM 3 O O2 1PG . . . C 2 0.271 43.174 12.217 1 45.87 ? O2 1PG 503 A 1 HETATM 4 C C3 1PG . . . C 2 -1.126 42.865 12.1 1 43.11 ? C3 1PG 503 A 1 HETATM 5 C C4 1PG . . . C 2 1.007 43.554 11.034 1 44.7 ? C4 1PG 503 A 1 HETATM 6 C C5 1PG . . . C 2 0.622 44.873 10.356 1 47.54 ? C5 1PG 503 A 1 HETATM 7 O O3 1PG . . . C 2 0.722 44.697 8.923 1 49.38 ? O3 1PG 503 A 1 HETATM 8 C C6 1PG . . . C 2 0.14 45.771 8.185 1 50.95 ? C6 1PG 503 A 1 HETATM 9 C C7 1PG . . . C 2 -0.912 45.237 7.222 1 53.53 ? C7 1PG 503 A 1 HETATM 10 O O4 1PG . . . C 2 -2.183 45.757 7.625 1 56.53 ? O4 1PG 503 A 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #