data_1NEJ # _model_server_result.job_id yzz8jsAjQI2em8or1JimCw _model_server_result.datetime_utc '2024-11-15 18:58:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1nej # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":2148}' # _entry.id 1NEJ # _exptl.entry_id 1NEJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 28.01 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CARBON MONOXIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1NEJ _cell.length_a 58 _cell.length_b 58.53 _cell.length_c 171.84 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NEJ _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 H N N ? 4 J N N ? 4 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 87 A HIS 87 1_555 E FE HEM . A HEM 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc2 E FE HEM . A HEM 142 1_555 F C CMO . A CMO 1143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.777 ? metalc ? metalc3 E FE HEM . A HEM 142 1_555 F O CMO . A CMO 1143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.903 ? metalc ? metalc4 B NE2 HIS 92 B HIS 92 1_555 G FE HEM . B HEM 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc5 G FE HEM . B HEM 147 1_555 H C CMO . B CMO 2148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.792 ? metalc ? metalc6 G FE HEM . B HEM 147 1_555 H O CMO . B CMO 2148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.916 ? metalc ? metalc7 C NE2 HIS 87 C HIS 87 1_555 I FE HEM . C HEM 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc8 I FE HEM . C HEM 142 1_555 J C CMO . C CMO 3143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.8 ? metalc ? metalc9 I FE HEM . C HEM 142 1_555 J O CMO . C CMO 3143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.919 ? metalc ? metalc10 D NE2 HIS 92 D HIS 92 1_555 K FE HEM . D HEM 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc11 K FE HEM . D HEM 147 1_555 L C CMO . D CMO 4148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.776 ? metalc ? metalc12 K FE HEM . D HEM 147 1_555 L O CMO . D CMO 4148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.892 ? # _chem_comp.formula 'C O' _chem_comp.formula_weight 28.01 _chem_comp.id CMO _chem_comp.mon_nstd_flag . _chem_comp.name 'CARBON MONOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _chem_comp_bond.atom_id_1 C _chem_comp_bond.atom_id_2 O _chem_comp_bond.comp_id CMO _chem_comp_bond.value_order trip _chem_comp_bond.pdbx_ordinal 70 _chem_comp_bond.pdbx_stereo_config n _chem_comp_bond.pdbx_aromatic_flag n # _atom_sites.entry_id 1NEJ _atom_sites.fract_transf_matrix[1][1] 0.017241 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017085 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005819 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HEM A 1 142 142 HEM HEM . F 4 CMO A 1 1143 1143 CMO CMO . G 3 HEM B 1 147 147 HEM HEM . H 4 CMO B 1 2148 2148 CMO CMO . I 3 HEM C 1 142 142 HEM HEM . J 4 CMO C 1 3143 3143 CMO CMO . K 3 HEM D 1 147 147 HEM HEM . L 4 CMO D 1 4148 4148 CMO CMO . M 5 HOH A 1 201 201 HOH HOH . M 5 HOH A 2 202 202 HOH HOH . M 5 HOH A 3 203 203 HOH HOH . M 5 HOH A 4 204 204 HOH HOH . M 5 HOH A 5 206 206 HOH HOH . M 5 HOH A 6 209 209 HOH HOH . M 5 HOH A 7 210 210 HOH HOH . M 5 HOH A 8 212 212 HOH HOH . M 5 HOH A 9 213 213 HOH HOH . M 5 HOH A 10 214 214 HOH HOH . M 5 HOH A 11 215 215 HOH HOH . M 5 HOH A 12 216 216 HOH HOH . M 5 HOH A 13 217 217 HOH HOH . M 5 HOH A 14 218 218 HOH HOH . M 5 HOH A 15 219 219 HOH HOH . M 5 HOH A 16 220 220 HOH HOH . M 5 HOH A 17 221 221 HOH HOH . M 5 HOH A 18 224 224 HOH HOH . M 5 HOH A 19 225 225 HOH HOH . M 5 HOH A 20 226 226 HOH HOH . M 5 HOH A 21 227 227 HOH HOH . M 5 HOH A 22 228 228 HOH HOH . M 5 HOH A 23 229 229 HOH HOH . M 5 HOH A 24 230 230 HOH HOH . M 5 HOH A 25 231 231 HOH HOH . M 5 HOH A 26 232 232 HOH HOH . M 5 HOH A 27 233 233 HOH HOH . M 5 HOH A 28 234 234 HOH HOH . M 5 HOH A 29 235 235 HOH HOH . M 5 HOH A 30 236 236 HOH HOH . M 5 HOH A 31 237 237 HOH HOH . M 5 HOH A 32 238 238 HOH HOH . M 5 HOH A 33 239 239 HOH HOH . M 5 HOH A 34 240 240 HOH HOH . M 5 HOH A 35 241 241 HOH HOH . M 5 HOH A 36 242 242 HOH HOH . M 5 HOH A 37 243 243 HOH HOH . M 5 HOH A 38 244 244 HOH HOH . M 5 HOH A 39 245 245 HOH HOH . M 5 HOH A 40 246 246 HOH HOH . M 5 HOH A 41 247 247 HOH HOH . M 5 HOH A 42 250 250 HOH HOH . M 5 HOH A 43 251 251 HOH HOH . M 5 HOH A 44 254 254 HOH HOH . M 5 HOH A 45 289 289 HOH HOH . M 5 HOH A 46 290 290 HOH HOH . M 5 HOH A 47 382 382 HOH HOH . M 5 HOH A 48 420 420 HOH HOH . M 5 HOH A 49 421 421 HOH HOH . M 5 HOH A 50 422 422 HOH HOH . M 5 HOH A 51 423 423 HOH HOH . M 5 HOH A 52 424 424 HOH HOH . M 5 HOH A 53 426 426 HOH HOH . M 5 HOH A 54 427 427 HOH HOH . M 5 HOH A 55 428 428 HOH HOH . M 5 HOH A 56 429 429 HOH HOH . N 5 HOH B 1 211 211 HOH HOH . N 5 HOH B 2 222 222 HOH HOH . N 5 HOH B 3 223 223 HOH HOH . N 5 HOH B 4 248 248 HOH HOH . N 5 HOH B 5 255 255 HOH HOH . N 5 HOH B 6 256 256 HOH HOH . N 5 HOH B 7 257 257 HOH HOH . N 5 HOH B 8 258 258 HOH HOH . N 5 HOH B 9 259 259 HOH HOH . N 5 HOH B 10 260 260 HOH HOH . N 5 HOH B 11 261 261 HOH HOH . N 5 HOH B 12 262 262 HOH HOH . N 5 HOH B 13 263 263 HOH HOH . N 5 HOH B 14 264 264 HOH HOH . N 5 HOH B 15 265 265 HOH HOH . N 5 HOH B 16 266 266 HOH HOH . N 5 HOH B 17 267 267 HOH HOH . N 5 HOH B 18 268 268 HOH HOH . N 5 HOH B 19 269 269 HOH HOH . N 5 HOH B 20 270 270 HOH HOH . N 5 HOH B 21 271 271 HOH HOH . N 5 HOH B 22 272 272 HOH HOH . N 5 HOH B 23 273 273 HOH HOH . N 5 HOH B 24 274 274 HOH HOH . N 5 HOH B 25 277 277 HOH HOH . N 5 HOH B 26 278 278 HOH HOH . N 5 HOH B 27 279 279 HOH HOH . N 5 HOH B 28 280 280 HOH HOH . N 5 HOH B 29 281 281 HOH HOH . N 5 HOH B 30 282 282 HOH HOH . N 5 HOH B 31 283 283 HOH HOH . N 5 HOH B 32 284 284 HOH HOH . N 5 HOH B 33 285 285 HOH HOH . N 5 HOH B 34 286 286 HOH HOH . N 5 HOH B 35 287 287 HOH HOH . N 5 HOH B 36 288 288 HOH HOH . N 5 HOH B 37 291 291 HOH HOH . N 5 HOH B 38 292 292 HOH HOH . N 5 HOH B 39 293 293 HOH HOH . N 5 HOH B 40 294 294 HOH HOH . N 5 HOH B 41 295 295 HOH HOH . N 5 HOH B 42 296 296 HOH HOH . N 5 HOH B 43 297 297 HOH HOH . N 5 HOH B 44 298 298 HOH HOH . N 5 HOH B 45 299 299 HOH HOH . N 5 HOH B 46 300 300 HOH HOH . N 5 HOH B 47 301 301 HOH HOH . N 5 HOH B 48 302 302 HOH HOH . N 5 HOH B 49 414 414 HOH HOH . N 5 HOH B 50 425 425 HOH HOH . N 5 HOH B 51 430 430 HOH HOH . N 5 HOH B 52 431 431 HOH HOH . N 5 HOH B 53 432 432 HOH HOH . O 5 HOH C 1 205 205 HOH HOH . O 5 HOH C 2 207 207 HOH HOH . O 5 HOH C 3 208 208 HOH HOH . O 5 HOH C 4 249 249 HOH HOH . O 5 HOH C 5 252 252 HOH HOH . O 5 HOH C 6 253 253 HOH HOH . O 5 HOH C 7 275 275 HOH HOH . O 5 HOH C 8 276 276 HOH HOH . O 5 HOH C 9 309 309 HOH HOH . O 5 HOH C 10 310 310 HOH HOH . O 5 HOH C 11 311 311 HOH HOH . O 5 HOH C 12 312 312 HOH HOH . O 5 HOH C 13 313 313 HOH HOH . O 5 HOH C 14 314 314 HOH HOH . O 5 HOH C 15 315 315 HOH HOH . O 5 HOH C 16 316 316 HOH HOH . O 5 HOH C 17 317 317 HOH HOH . O 5 HOH C 18 318 318 HOH HOH . O 5 HOH C 19 319 319 HOH HOH . O 5 HOH C 20 320 320 HOH HOH . O 5 HOH C 21 321 321 HOH HOH . O 5 HOH C 22 322 322 HOH HOH . O 5 HOH C 23 323 323 HOH HOH . O 5 HOH C 24 324 324 HOH HOH . O 5 HOH C 25 325 325 HOH HOH . O 5 HOH C 26 326 326 HOH HOH . O 5 HOH C 27 327 327 HOH HOH . O 5 HOH C 28 328 328 HOH HOH . O 5 HOH C 29 329 329 HOH HOH . O 5 HOH C 30 330 330 HOH HOH . O 5 HOH C 31 331 331 HOH HOH . O 5 HOH C 32 332 332 HOH HOH . O 5 HOH C 33 333 333 HOH HOH . O 5 HOH C 34 334 334 HOH HOH . O 5 HOH C 35 335 335 HOH HOH . O 5 HOH C 36 336 336 HOH HOH . O 5 HOH C 37 337 337 HOH HOH . O 5 HOH C 38 338 338 HOH HOH . O 5 HOH C 39 339 339 HOH HOH . O 5 HOH C 40 340 340 HOH HOH . O 5 HOH C 41 341 341 HOH HOH . O 5 HOH C 42 342 342 HOH HOH . O 5 HOH C 43 343 343 HOH HOH . O 5 HOH C 44 344 344 HOH HOH . O 5 HOH C 45 345 345 HOH HOH . O 5 HOH C 46 346 346 HOH HOH . O 5 HOH C 47 347 347 HOH HOH . O 5 HOH C 48 348 348 HOH HOH . O 5 HOH C 49 349 349 HOH HOH . O 5 HOH C 50 351 351 HOH HOH . O 5 HOH C 51 352 352 HOH HOH . O 5 HOH C 52 353 353 HOH HOH . O 5 HOH C 53 354 354 HOH HOH . O 5 HOH C 54 417 417 HOH HOH . O 5 HOH C 55 418 418 HOH HOH . O 5 HOH C 56 419 419 HOH HOH . O 5 HOH C 57 433 433 HOH HOH . P 5 HOH D 1 303 303 HOH HOH . P 5 HOH D 2 304 304 HOH HOH . P 5 HOH D 3 305 305 HOH HOH . P 5 HOH D 4 306 306 HOH HOH . P 5 HOH D 5 307 307 HOH HOH . P 5 HOH D 6 308 308 HOH HOH . P 5 HOH D 7 350 350 HOH HOH . P 5 HOH D 8 355 355 HOH HOH . P 5 HOH D 9 356 356 HOH HOH . P 5 HOH D 10 357 357 HOH HOH . P 5 HOH D 11 358 358 HOH HOH . P 5 HOH D 12 359 359 HOH HOH . P 5 HOH D 13 360 360 HOH HOH . P 5 HOH D 14 361 361 HOH HOH . P 5 HOH D 15 362 362 HOH HOH . P 5 HOH D 16 363 363 HOH HOH . P 5 HOH D 17 364 364 HOH HOH . P 5 HOH D 18 365 365 HOH HOH . P 5 HOH D 19 366 366 HOH HOH . P 5 HOH D 20 367 367 HOH HOH . P 5 HOH D 21 368 368 HOH HOH . P 5 HOH D 22 369 369 HOH HOH . P 5 HOH D 23 370 370 HOH HOH . P 5 HOH D 24 371 371 HOH HOH . P 5 HOH D 25 372 372 HOH HOH . P 5 HOH D 26 373 373 HOH HOH . P 5 HOH D 27 374 374 HOH HOH . P 5 HOH D 28 375 375 HOH HOH . P 5 HOH D 29 376 376 HOH HOH . P 5 HOH D 30 377 377 HOH HOH . P 5 HOH D 31 378 378 HOH HOH . P 5 HOH D 32 379 379 HOH HOH . P 5 HOH D 33 380 380 HOH HOH . P 5 HOH D 34 381 381 HOH HOH . P 5 HOH D 35 383 383 HOH HOH . P 5 HOH D 36 384 384 HOH HOH . P 5 HOH D 37 385 385 HOH HOH . P 5 HOH D 38 386 386 HOH HOH . P 5 HOH D 39 387 387 HOH HOH . P 5 HOH D 40 388 388 HOH HOH . P 5 HOH D 41 389 389 HOH HOH . P 5 HOH D 42 390 390 HOH HOH . P 5 HOH D 43 391 391 HOH HOH . P 5 HOH D 44 392 392 HOH HOH . P 5 HOH D 45 393 393 HOH HOH . P 5 HOH D 46 394 394 HOH HOH . P 5 HOH D 47 395 395 HOH HOH . P 5 HOH D 48 396 396 HOH HOH . P 5 HOH D 49 397 397 HOH HOH . P 5 HOH D 50 398 398 HOH HOH . P 5 HOH D 51 399 399 HOH HOH . P 5 HOH D 52 400 400 HOH HOH . P 5 HOH D 53 401 401 HOH HOH . P 5 HOH D 54 402 402 HOH HOH . P 5 HOH D 55 403 403 HOH HOH . P 5 HOH D 56 404 404 HOH HOH . P 5 HOH D 57 405 405 HOH HOH . P 5 HOH D 58 406 406 HOH HOH . P 5 HOH D 59 407 407 HOH HOH . P 5 HOH D 60 408 408 HOH HOH . P 5 HOH D 61 409 409 HOH HOH . P 5 HOH D 62 410 410 HOH HOH . P 5 HOH D 63 411 411 HOH HOH . P 5 HOH D 64 412 412 HOH HOH . P 5 HOH D 65 413 413 HOH HOH . P 5 HOH D 66 415 415 HOH HOH . P 5 HOH D 67 416 416 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C CMO . . . H 4 -1.835 19.096 64.49 1 58.32 ? C CMO 2148 B 1 HETATM 2 O O CMO . . . H 4 -1.564 18.08 64.08 1 56.1 ? O CMO 2148 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 2 #