data_1NFB
#
_model_server_result.job_id            LQ6n252sHAfiKjijlvm20Q 
_model_server_result.datetime_utc      '2024-11-22 04:41:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1nfb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":631}' 
#
_entry.id    1NFB 
#
_exptl.entry_id    1NFB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              367.66 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "6-CHLOROPURINE RIBOSIDE,5'-MONOPHOSPHATE" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1NFB 
_cell.length_a            145.19 
_cell.length_b            145.19 
_cell.length_c            127.1 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1NFB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        79 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'I 4' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA,PQS tetrameric 4 author_and_software_defined_assembly 1 
PISA,PQS tetrameric 4 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1,2,3,4 
B,E,F,H 2 1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 145.19 145.19 0 
3 'crystal symmetry operation' 3_655 -y+1,x,z 0 -1 0 1 0 0 0 0 1 145.19 0 0 
4 'crystal symmetry operation' 4_565 y,-x+1,z 0 1 0 -1 0 0 0 0 1 0 145.19 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 331 A CYS 331 1_555 C C6 CPR . A CPR 631 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.854 ? 
covale ? covale2 B SG CYS 331 B CYS 331 1_555 E C6 CPR . B CPR 631 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.867 ? 
#
_chem_comp.formula           'C10 H13 Cl N4 O7 P 1' 
_chem_comp.formula_weight    367.66 
_chem_comp.id                CPR 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "6-CHLOROPURINE RIBOSIDE, 5'-MONOPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P CPR doub 70 n n 
P O2P CPR sing 71 n n 
P O3P CPR sing 72 n n 
P O5' CPR sing 73 n n 
O2P HOP2 CPR sing 74 n n 
O3P HOP3 CPR sing 75 n n 
O5' C5' CPR sing 76 n n 
C5' C4' CPR sing 77 n n 
C5' "H5'1" CPR sing 78 n n 
C5' "H5'2" CPR sing 79 n n 
C4' O4' CPR sing 80 n n 
C4' C3' CPR sing 81 n n 
C4' H4' CPR sing 82 n n 
O4' C1' CPR sing 83 n n 
C3' O3' CPR sing 84 n n 
C3' C2' CPR sing 85 n n 
C3' H3' CPR sing 86 n n 
O3' HO3' CPR sing 87 n n 
C2' O2' CPR sing 88 n n 
C2' C1' CPR sing 89 n n 
C2' H2' CPR sing 90 n n 
O2' HO2' CPR sing 91 n n 
C1' N9 CPR sing 92 n n 
C1' H1' CPR sing 93 n n 
N9 C8 CPR sing 94 n y 
N9 C4 CPR sing 95 n y 
C8 N7 CPR doub 96 n y 
C8 H8 CPR sing 97 n n 
N7 C5 CPR sing 98 n y 
C5 C6 CPR sing 99 n y 
C5 C4 CPR doub 100 n y 
C6 CL CPR sing 101 n n 
C6 N1 CPR doub 102 n y 
N1 C2 CPR sing 103 n y 
N1 HN1 CPR sing 104 n n 
C2 N3 CPR doub 105 n y 
C2 H2 CPR sing 106 n n 
N3 C4 CPR sing 107 n y 
#
_atom_sites.entry_id                     1NFB 
_atom_sites.fract_transf_matrix[1][1]    0.006888 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006888 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007868 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CPR A 1 631 631 CPR CPR . 
D 3 NAD A 1 701 701 NAD NAD . 
E 2 CPR B 1 631 631 CPR CPR . 
F 3 NAD B 1 702 702 NAD NAD . 
G 4 HOH A 1 702 7 HOH HOH . 
G 4 HOH A 2 703 8 HOH HOH . 
G 4 HOH A 3 704 23 HOH HOH . 
G 4 HOH A 4 705 24 HOH HOH . 
G 4 HOH A 5 706 25 HOH HOH . 
G 4 HOH A 6 707 26 HOH HOH . 
G 4 HOH A 7 708 27 HOH HOH . 
G 4 HOH A 8 709 28 HOH HOH . 
G 4 HOH A 9 710 29 HOH HOH . 
G 4 HOH A 10 711 30 HOH HOH . 
G 4 HOH A 11 712 31 HOH HOH . 
G 4 HOH A 12 713 32 HOH HOH . 
G 4 HOH A 13 714 34 HOH HOH . 
G 4 HOH A 14 715 35 HOH HOH . 
G 4 HOH A 15 716 36 HOH HOH . 
G 4 HOH A 16 717 37 HOH HOH . 
G 4 HOH A 17 718 38 HOH HOH . 
G 4 HOH A 18 719 39 HOH HOH . 
G 4 HOH A 19 720 40 HOH HOH . 
G 4 HOH A 20 721 41 HOH HOH . 
G 4 HOH A 21 722 42 HOH HOH . 
G 4 HOH A 22 723 43 HOH HOH . 
G 4 HOH A 23 724 44 HOH HOH . 
G 4 HOH A 24 725 53 HOH HOH . 
G 4 HOH A 25 726 54 HOH HOH . 
G 4 HOH A 26 727 55 HOH HOH . 
G 4 HOH A 27 728 56 HOH HOH . 
G 4 HOH A 28 729 57 HOH HOH . 
G 4 HOH A 29 730 58 HOH HOH . 
G 4 HOH A 30 731 59 HOH HOH . 
G 4 HOH A 31 732 60 HOH HOH . 
G 4 HOH A 32 733 61 HOH HOH . 
G 4 HOH A 33 734 62 HOH HOH . 
G 4 HOH A 34 735 63 HOH HOH . 
G 4 HOH A 35 736 64 HOH HOH . 
G 4 HOH A 36 737 65 HOH HOH . 
G 4 HOH A 37 738 66 HOH HOH . 
G 4 HOH A 38 739 67 HOH HOH . 
G 4 HOH A 39 740 68 HOH HOH . 
G 4 HOH A 40 741 69 HOH HOH . 
G 4 HOH A 41 742 70 HOH HOH . 
G 4 HOH A 42 743 71 HOH HOH . 
G 4 HOH A 43 744 120 HOH HOH . 
H 4 HOH B 1 703 1 HOH HOH . 
H 4 HOH B 2 704 2 HOH HOH . 
H 4 HOH B 3 705 3 HOH HOH . 
H 4 HOH B 4 706 4 HOH HOH . 
H 4 HOH B 5 707 5 HOH HOH . 
H 4 HOH B 6 708 6 HOH HOH . 
H 4 HOH B 7 709 9 HOH HOH . 
H 4 HOH B 8 710 10 HOH HOH . 
H 4 HOH B 9 711 11 HOH HOH . 
H 4 HOH B 10 712 12 HOH HOH . 
H 4 HOH B 11 713 13 HOH HOH . 
H 4 HOH B 12 714 14 HOH HOH . 
H 4 HOH B 13 715 15 HOH HOH . 
H 4 HOH B 14 716 16 HOH HOH . 
H 4 HOH B 15 717 17 HOH HOH . 
H 4 HOH B 16 718 18 HOH HOH . 
H 4 HOH B 17 719 19 HOH HOH . 
H 4 HOH B 18 720 20 HOH HOH . 
H 4 HOH B 19 721 21 HOH HOH . 
H 4 HOH B 20 722 22 HOH HOH . 
H 4 HOH B 21 723 45 HOH HOH . 
H 4 HOH B 22 724 46 HOH HOH . 
H 4 HOH B 23 725 47 HOH HOH . 
H 4 HOH B 24 726 48 HOH HOH . 
H 4 HOH B 25 727 49 HOH HOH . 
H 4 HOH B 26 728 50 HOH HOH . 
H 4 HOH B 27 729 51 HOH HOH . 
H 4 HOH B 28 730 72 HOH HOH . 
H 4 HOH B 29 731 73 HOH HOH . 
H 4 HOH B 30 732 74 HOH HOH . 
H 4 HOH B 31 733 75 HOH HOH . 
H 4 HOH B 32 734 76 HOH HOH . 
H 4 HOH B 33 735 77 HOH HOH . 
H 4 HOH B 34 736 78 HOH HOH . 
H 4 HOH B 35 737 79 HOH HOH . 
H 4 HOH B 36 738 80 HOH HOH . 
H 4 HOH B 37 739 81 HOH HOH . 
H 4 HOH B 38 740 82 HOH HOH . 
H 4 HOH B 39 741 83 HOH HOH . 
H 4 HOH B 40 742 85 HOH HOH . 
H 4 HOH B 41 743 86 HOH HOH . 
H 4 HOH B 42 744 115 HOH HOH . 
H 4 HOH B 43 745 167 HOH HOH . 
H 4 HOH B 44 746 246 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P CPR . . . E 2 51.614 78.506 -52.041 1 69.9 ? P CPR 631 B 1 
HETATM 2 O O1P CPR . . . E 2 50.412 77.884 -52.637 1 70.43 ? O1P CPR 631 B 1 
HETATM 3 O O2P CPR . . . E 2 52.861 78.534 -52.83 1 70.02 ? O2P CPR 631 B 1 
HETATM 4 O O3P CPR . . . E 2 51.907 77.841 -50.615 1 70.2 ? O3P CPR 631 B 1 
HETATM 5 O O5' CPR . . . E 2 51.291 80.018 -51.635 1 70.13 ? O5' CPR 631 B 1 
HETATM 6 C C5' CPR . . . E 2 49.974 80.529 -51.661 1 70.37 ? C5' CPR 631 B 1 
HETATM 7 C C4' CPR . . . E 2 49.882 81.618 -50.634 1 69.97 ? C4' CPR 631 B 1 
HETATM 8 O O4' CPR . . . E 2 50.997 82.549 -50.74 1 69.95 ? O4' CPR 631 B 1 
HETATM 9 C C3' CPR . . . E 2 48.644 82.449 -50.764 1 69.76 ? C3' CPR 631 B 1 
HETATM 10 O O3' CPR . . . E 2 47.567 81.859 -50.041 1 69.8 ? O3' CPR 631 B 1 
HETATM 11 C C2' CPR . . . E 2 49.04 83.715 -50.101 1 69.89 ? C2' CPR 631 B 1 
HETATM 12 O O2' CPR . . . E 2 48.976 83.552 -48.687 1 70.08 ? O2' CPR 631 B 1 
HETATM 13 C C1' CPR . . . E 2 50.496 83.907 -50.515 1 70.18 ? C1' CPR 631 B 1 
HETATM 14 N N9 CPR . . . E 2 50.615 84.621 -51.821 1 70.38 ? N9 CPR 631 B 1 
HETATM 15 C C8 CPR . . . E 2 50.059 84.262 -52.993 1 70.27 ? C8 CPR 631 B 1 
HETATM 16 N N7 CPR . . . E 2 50.401 85.151 -53.933 1 70 ? N7 CPR 631 B 1 
HETATM 17 C C5 CPR . . . E 2 51.167 86.067 -53.363 1 70.19 ? C5 CPR 631 B 1 
HETATM 18 C C6 CPR . . . E 2 51.809 87.212 -53.831 1 70.72 ? C6 CPR 631 B 1 
HETATM 19 N N1 CPR . . . E 2 52.531 87.952 -52.978 1 70.87 ? N1 CPR 631 B 1 
HETATM 20 C C2 CPR . . . E 2 52.654 87.61 -51.687 1 70.6 ? C2 CPR 631 B 1 
HETATM 21 N N3 CPR . . . E 2 52.05 86.517 -51.21 1 70.03 ? N3 CPR 631 B 1 
HETATM 22 C C4 CPR . . . E 2 51.308 85.733 -52.026 1 70.13 ? C4 CPR 631 B 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           292 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           22 
#