data_1NG3 # _model_server_result.job_id ulG4AlL6V3CTgoiQpaqYTg _model_server_result.datetime_utc '2024-11-27 15:47:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ng3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 1NG3 # _exptl.entry_id 1NG3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1NG3 _cell.length_a 139.378 _cell.length_b 139.378 _cell.length_c 208.155 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NG3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+5/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 69.689 120.704889 173.4625 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 365 n n P O2 PO4 sing 366 n n P O3 PO4 sing 367 n n P O4 PO4 sing 368 n n # _atom_sites.entry_id 1NG3 _atom_sites.fract_transf_matrix[1][1] 0.007175 _atom_sites.fract_transf_matrix[1][2] 0.004142 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008285 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004804 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 402 402 PO4 PO4 . D 3 FAD A 1 400 400 FAD FAD . E 4 AAC A 1 401 401 AAC AAC . F 3 FAD B 1 500 400 FAD FAD . G 4 AAC B 1 501 401 AAC AAC . H 5 HOH A 1 403 1 HOH TIP . H 5 HOH A 2 404 4 HOH TIP . H 5 HOH A 3 405 9 HOH TIP . H 5 HOH A 4 406 10 HOH TIP . H 5 HOH A 5 407 12 HOH TIP . H 5 HOH A 6 408 13 HOH TIP . H 5 HOH A 7 409 14 HOH TIP . H 5 HOH A 8 410 19 HOH TIP . H 5 HOH A 9 411 21 HOH TIP . H 5 HOH A 10 412 22 HOH TIP . H 5 HOH A 11 413 23 HOH TIP . H 5 HOH A 12 414 24 HOH TIP . H 5 HOH A 13 415 25 HOH TIP . H 5 HOH A 14 416 27 HOH TIP . H 5 HOH A 15 417 30 HOH TIP . H 5 HOH A 16 418 32 HOH TIP . H 5 HOH A 17 419 33 HOH TIP . H 5 HOH A 18 420 35 HOH TIP . H 5 HOH A 19 421 37 HOH TIP . H 5 HOH A 20 422 39 HOH TIP . H 5 HOH A 21 423 43 HOH TIP . H 5 HOH A 22 424 44 HOH TIP . H 5 HOH A 23 425 48 HOH TIP . H 5 HOH A 24 426 51 HOH TIP . H 5 HOH A 25 427 53 HOH TIP . H 5 HOH A 26 428 56 HOH TIP . H 5 HOH A 27 429 60 HOH TIP . H 5 HOH A 28 430 64 HOH TIP . H 5 HOH A 29 431 65 HOH TIP . H 5 HOH A 30 432 66 HOH TIP . H 5 HOH A 31 433 67 HOH TIP . H 5 HOH A 32 434 68 HOH TIP . H 5 HOH A 33 435 70 HOH TIP . H 5 HOH A 34 436 72 HOH TIP . H 5 HOH A 35 437 74 HOH TIP . H 5 HOH A 36 438 76 HOH TIP . H 5 HOH A 37 439 77 HOH TIP . H 5 HOH A 38 440 78 HOH TIP . H 5 HOH A 39 441 79 HOH TIP . H 5 HOH A 40 442 81 HOH TIP . H 5 HOH A 41 443 83 HOH TIP . H 5 HOH A 42 444 84 HOH TIP . H 5 HOH A 43 445 85 HOH TIP . H 5 HOH A 44 446 88 HOH TIP . H 5 HOH A 45 447 91 HOH TIP . H 5 HOH A 46 448 92 HOH TIP . H 5 HOH A 47 449 95 HOH TIP . H 5 HOH A 48 450 99 HOH TIP . H 5 HOH A 49 451 101 HOH TIP . H 5 HOH A 50 452 102 HOH TIP . H 5 HOH A 51 453 103 HOH TIP . H 5 HOH A 52 454 104 HOH TIP . H 5 HOH A 53 455 107 HOH TIP . I 5 HOH B 1 502 2 HOH TIP . I 5 HOH B 2 503 3 HOH TIP . I 5 HOH B 3 504 5 HOH TIP . I 5 HOH B 4 505 6 HOH TIP . I 5 HOH B 5 506 7 HOH TIP . I 5 HOH B 6 507 8 HOH TIP . I 5 HOH B 7 508 11 HOH TIP . I 5 HOH B 8 509 15 HOH TIP . I 5 HOH B 9 510 16 HOH TIP . I 5 HOH B 10 511 17 HOH TIP . I 5 HOH B 11 512 18 HOH TIP . I 5 HOH B 12 513 20 HOH TIP . I 5 HOH B 13 514 26 HOH TIP . I 5 HOH B 14 515 28 HOH TIP . I 5 HOH B 15 516 29 HOH TIP . I 5 HOH B 16 517 31 HOH TIP . I 5 HOH B 17 518 34 HOH TIP . I 5 HOH B 18 519 36 HOH TIP . I 5 HOH B 19 520 38 HOH TIP . I 5 HOH B 20 521 40 HOH TIP . I 5 HOH B 21 522 41 HOH TIP . I 5 HOH B 22 523 42 HOH TIP . I 5 HOH B 23 524 45 HOH TIP . I 5 HOH B 24 525 46 HOH TIP . I 5 HOH B 25 526 47 HOH TIP . I 5 HOH B 26 527 49 HOH TIP . I 5 HOH B 27 528 50 HOH TIP . I 5 HOH B 28 529 52 HOH TIP . I 5 HOH B 29 530 54 HOH TIP . I 5 HOH B 30 531 55 HOH TIP . I 5 HOH B 31 532 57 HOH TIP . I 5 HOH B 32 533 58 HOH TIP . I 5 HOH B 33 534 59 HOH TIP . I 5 HOH B 34 535 61 HOH TIP . I 5 HOH B 35 536 62 HOH TIP . I 5 HOH B 36 537 63 HOH TIP . I 5 HOH B 37 538 69 HOH TIP . I 5 HOH B 38 539 71 HOH TIP . I 5 HOH B 39 540 73 HOH TIP . I 5 HOH B 40 541 75 HOH TIP . I 5 HOH B 41 542 80 HOH TIP . I 5 HOH B 42 543 82 HOH TIP . I 5 HOH B 43 544 86 HOH TIP . I 5 HOH B 44 545 87 HOH TIP . I 5 HOH B 45 546 89 HOH TIP . I 5 HOH B 46 547 90 HOH TIP . I 5 HOH B 47 548 93 HOH TIP . I 5 HOH B 48 549 94 HOH TIP . I 5 HOH B 49 550 96 HOH TIP . I 5 HOH B 50 551 97 HOH TIP . I 5 HOH B 51 552 98 HOH TIP . I 5 HOH B 52 553 100 HOH TIP . I 5 HOH B 53 554 105 HOH TIP . I 5 HOH B 54 555 106 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . C 2 40.179 65.072 75.652 1 63.35 ? P PO4 402 A 1 HETATM 2 O O1 PO4 . . . C 2 39.275 66.29 75.36 1 63.32 ? O1 PO4 402 A 1 HETATM 3 O O2 PO4 . . . C 2 39.189 63.898 75.497 1 60.3 ? O2 PO4 402 A 1 HETATM 4 O O3 PO4 . . . C 2 41.485 64.887 74.976 1 64.31 ? O3 PO4 402 A 1 HETATM 5 O O4 PO4 . . . C 2 40.482 65.183 77.189 1 62.07 ? O4 PO4 402 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 5 #