data_1NHB
#
_model_server_result.job_id            Rsoo5CqmswUZWZEEshBEow 
_model_server_result.datetime_utc      '2024-11-08 03:41:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1nhb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":170}' 
#
_entry.id    1NHB 
#
_exptl.entry_id    1NHB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              154.251 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-HYDROXYETHYL DISULFIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1NHB 
_cell.length_a            60.8 
_cell.length_b            60.8 
_cell.length_c            97.5 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1NHB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C4 H10 O2 S2' 
_chem_comp.formula_weight    154.251 
_chem_comp.id                HED 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-HYDROXYETHYL DISULFIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 HED sing 129 n n 
C1 C2 HED sing 130 n n 
C1 H11 HED sing 131 n n 
C1 H12 HED sing 132 n n 
O1 HO1 HED sing 133 n n 
C2 S3 HED sing 134 n n 
C2 H21 HED sing 135 n n 
C2 H22 HED sing 136 n n 
S3 S4 HED sing 137 n n 
S4 C5 HED sing 138 n n 
C5 C6 HED sing 139 n n 
C5 H51 HED sing 140 n n 
C5 H52 HED sing 141 n n 
C6 O6 HED sing 142 n n 
C6 H61 HED sing 143 n n 
C6 H62 HED sing 144 n n 
O6 HO6 HED sing 145 n n 
#
_atom_sites.entry_id                     1NHB 
_atom_sites.fract_transf_matrix[1][1]    0.016447 
_atom_sites.fract_transf_matrix[1][2]    0.009496 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018992 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010256 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CL A 1 173 173 CL CL . 
C 2 CL A 1 178 178 CL CL . 
D 3 HED A 1 170 170 HED HED . 
E 4 PYJ A 1 401 401 PYJ N2B . 
F 5 HOH A 1 171 171 HOH HOH . 
F 5 HOH A 2 172 172 HOH HOH . 
F 5 HOH A 3 174 174 HOH HOH . 
F 5 HOH A 4 175 175 HOH HOH . 
F 5 HOH A 5 177 177 HOH HOH . 
F 5 HOH A 6 179 179 HOH HOH . 
F 5 HOH A 7 180 180 HOH HOH . 
F 5 HOH A 8 181 181 HOH HOH . 
F 5 HOH A 9 182 182 HOH HOH . 
F 5 HOH A 10 183 183 HOH HOH . 
F 5 HOH A 11 184 184 HOH HOH . 
F 5 HOH A 12 185 185 HOH HOH . 
F 5 HOH A 13 186 186 HOH HOH . 
F 5 HOH A 14 187 187 HOH HOH . 
F 5 HOH A 15 188 188 HOH HOH . 
F 5 HOH A 16 189 189 HOH HOH . 
F 5 HOH A 17 190 190 HOH HOH . 
F 5 HOH A 18 191 191 HOH HOH . 
F 5 HOH A 19 192 192 HOH HOH . 
F 5 HOH A 20 193 193 HOH HOH . 
F 5 HOH A 21 194 194 HOH HOH . 
F 5 HOH A 22 195 195 HOH HOH . 
F 5 HOH A 23 196 196 HOH HOH . 
F 5 HOH A 24 198 198 HOH HOH . 
F 5 HOH A 25 200 200 HOH HOH . 
F 5 HOH A 26 201 201 HOH HOH . 
F 5 HOH A 27 202 202 HOH HOH . 
F 5 HOH A 28 203 203 HOH HOH . 
F 5 HOH A 29 204 204 HOH HOH . 
F 5 HOH A 30 207 207 HOH HOH . 
F 5 HOH A 31 208 208 HOH HOH . 
F 5 HOH A 32 209 209 HOH HOH . 
F 5 HOH A 33 210 210 HOH HOH . 
F 5 HOH A 34 211 211 HOH HOH . 
F 5 HOH A 35 213 213 HOH HOH . 
F 5 HOH A 36 214 214 HOH HOH . 
F 5 HOH A 37 215 215 HOH HOH . 
F 5 HOH A 38 216 216 HOH HOH . 
F 5 HOH A 39 217 217 HOH HOH . 
F 5 HOH A 40 218 218 HOH HOH . 
F 5 HOH A 41 219 219 HOH HOH . 
F 5 HOH A 42 220 220 HOH HOH . 
F 5 HOH A 43 221 221 HOH HOH . 
F 5 HOH A 44 222 222 HOH HOH . 
F 5 HOH A 45 223 223 HOH HOH . 
F 5 HOH A 46 224 224 HOH HOH . 
F 5 HOH A 47 225 225 HOH HOH . 
F 5 HOH A 48 226 226 HOH HOH . 
F 5 HOH A 49 227 227 HOH HOH . 
F 5 HOH A 50 228 228 HOH HOH . 
F 5 HOH A 51 229 229 HOH HOH . 
F 5 HOH A 52 230 230 HOH HOH . 
F 5 HOH A 53 231 231 HOH HOH . 
F 5 HOH A 54 232 232 HOH HOH . 
F 5 HOH A 55 233 233 HOH HOH . 
F 5 HOH A 56 234 234 HOH HOH . 
F 5 HOH A 57 235 235 HOH HOH . 
F 5 HOH A 58 236 236 HOH HOH . 
F 5 HOH A 59 237 237 HOH HOH . 
F 5 HOH A 60 238 238 HOH HOH . 
F 5 HOH A 61 239 239 HOH HOH . 
F 5 HOH A 62 240 240 HOH HOH . 
F 5 HOH A 63 242 242 HOH HOH . 
F 5 HOH A 64 244 244 HOH HOH . 
F 5 HOH A 65 245 245 HOH HOH . 
F 5 HOH A 66 246 246 HOH HOH . 
F 5 HOH A 67 247 247 HOH HOH . 
F 5 HOH A 68 248 248 HOH HOH . 
F 5 HOH A 69 249 249 HOH HOH . 
F 5 HOH A 70 250 250 HOH HOH . 
F 5 HOH A 71 251 251 HOH HOH . 
F 5 HOH A 72 254 254 HOH HOH . 
F 5 HOH A 73 256 256 HOH HOH . 
F 5 HOH A 74 259 259 HOH HOH . 
F 5 HOH A 75 260 260 HOH HOH . 
F 5 HOH A 76 261 261 HOH HOH . 
F 5 HOH A 77 263 263 HOH HOH . 
F 5 HOH A 78 265 265 HOH HOH . 
F 5 HOH A 79 266 266 HOH HOH . 
F 5 HOH A 80 267 267 HOH HOH . 
F 5 HOH A 81 268 268 HOH HOH . 
F 5 HOH A 82 269 269 HOH HOH . 
F 5 HOH A 83 271 271 HOH HOH . 
F 5 HOH A 84 272 272 HOH HOH . 
F 5 HOH A 85 273 273 HOH HOH . 
F 5 HOH A 86 274 274 HOH HOH . 
F 5 HOH A 87 277 277 HOH HOH . 
F 5 HOH A 88 278 278 HOH HOH . 
F 5 HOH A 89 280 280 HOH HOH . 
F 5 HOH A 90 281 281 HOH HOH . 
F 5 HOH A 91 282 282 HOH HOH . 
F 5 HOH A 92 283 283 HOH HOH . 
F 5 HOH A 93 284 284 HOH HOH . 
F 5 HOH A 94 285 285 HOH HOH . 
F 5 HOH A 95 286 286 HOH HOH . 
F 5 HOH A 96 288 288 HOH HOH . 
F 5 HOH A 97 289 289 HOH HOH . 
F 5 HOH A 98 290 290 HOH HOH . 
F 5 HOH A 99 292 292 HOH HOH . 
F 5 HOH A 100 293 293 HOH HOH . 
F 5 HOH A 101 294 294 HOH HOH . 
F 5 HOH A 102 295 295 HOH HOH . 
F 5 HOH A 103 296 296 HOH HOH . 
F 5 HOH A 104 297 297 HOH HOH . 
F 5 HOH A 105 298 298 HOH HOH . 
F 5 HOH A 106 299 299 HOH HOH . 
F 5 HOH A 107 300 300 HOH HOH . 
F 5 HOH A 108 301 301 HOH HOH . 
F 5 HOH A 109 302 302 HOH HOH . 
F 5 HOH A 110 303 303 HOH HOH . 
F 5 HOH A 111 306 306 HOH HOH . 
F 5 HOH A 112 307 307 HOH HOH . 
F 5 HOH A 113 311 311 HOH HOH . 
F 5 HOH A 114 312 312 HOH HOH . 
F 5 HOH A 115 313 313 HOH HOH . 
F 5 HOH A 116 314 314 HOH HOH . 
F 5 HOH A 117 315 315 HOH HOH . 
F 5 HOH A 118 318 318 HOH HOH . 
F 5 HOH A 119 319 319 HOH HOH . 
F 5 HOH A 120 321 321 HOH HOH . 
F 5 HOH A 121 322 322 HOH HOH . 
F 5 HOH A 122 323 323 HOH HOH . 
F 5 HOH A 123 324 324 HOH HOH . 
F 5 HOH A 124 325 325 HOH HOH . 
F 5 HOH A 125 326 326 HOH HOH . 
F 5 HOH A 126 327 327 HOH HOH . 
F 5 HOH A 127 328 328 HOH HOH . 
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loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 HED . . . D 3 31.905 -1.293 15.193 1 35.33 ? C1 HED 170 A 1 
HETATM 2 O O1 HED . . . D 3 33.107 -0.814 15.775 1 64.11 ? O1 HED 170 A 1 
HETATM 3 C C2 HED . . . D 3 31.861 -0.74 13.804 1 47.28 ? C2 HED 170 A 1 
HETATM 4 S S3 HED . . . D 3 33.302 -1.372 12.97 1 60.79 ? S3 HED 170 A 1 
HETATM 5 S S4 HED . . . D 3 32.836 -1.043 10.959 1 100 ? S4 HED 170 A 1 
HETATM 6 C C5 HED . . . D 3 32.558 -2.633 10.129 1 54 ? C5 HED 170 A 1 
HETATM 7 C C6 HED . . . D 3 33.874 -3.308 9.679 1 99.89 ? C6 HED 170 A 1 
HETATM 8 O O6 HED . . . D 3 34.621 -2.417 8.876 1 74.39 ? O6 HED 170 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    19 
_model_server_stats.query_time_ms           341 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           8 
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