data_1NHH # _model_server_result.job_id 7r5d0G3EuBPd5Ck4aBUAmQ _model_server_result.datetime_utc '2025-01-02 23:42:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1nhh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":503}' # _entry.id 1NHH # _exptl.entry_id 1NHH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1NHH _cell.length_a 61.747 _cell.length_b 71.171 _cell.length_c 189.615 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NHH _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 71.171 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 35 A ASN 33 1_555 B MG MG . A MG 370 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc2 A O LEU 72 A LEU 70 1_555 C RB RB . A RB 470 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.519 ? metalc ? metalc3 A O ALA 73 A ALA 71 1_555 C RB RB . A RB 470 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.266 ? metalc ? metalc4 A O ALA 75 A ALA 73 1_555 C RB RB . A RB 470 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.905 ? metalc ? metalc5 A O ALA 78 A ALA 76 1_555 C RB RB . A RB 470 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.045 ? metalc ? metalc6 A O GLY 98 A GLY 96 1_555 C RB RB . A RB 470 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.368 ? metalc ? metalc7 B MG MG . A MG 370 1_555 I O2B ANP . A ANP 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? metalc ? metalc8 B MG MG . A MG 370 1_555 I O2G ANP . A ANP 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc9 B MG MG . A MG 370 1_555 I O1A ANP . A ANP 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.449 ? metalc ? metalc10 B MG MG . A MG 370 1_555 J O HOH . A HOH 680 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc11 B MG MG . A MG 370 1_555 J O HOH . A HOH 681 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc12 I O2A ANP . A ANP 380 1_555 C RB RB . A RB 470 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.349 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 133 n n C1 C2 EDO sing 134 n n C1 H11 EDO sing 135 n n C1 H12 EDO sing 136 n n O1 HO1 EDO sing 137 n n C2 O2 EDO sing 138 n n C2 H21 EDO sing 139 n n C2 H22 EDO sing 140 n n O2 HO2 EDO sing 141 n n # _atom_sites.entry_id 1NHH _atom_sites.fract_transf_matrix[1][1] 0.016195 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014051 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005274 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 370 370 MG MG . C 3 RB A 1 470 470 RB RB . D 4 EDO A 1 500 500 EDO EDO . E 4 EDO A 1 501 501 EDO EDO . F 4 EDO A 1 502 502 EDO EDO . G 4 EDO A 1 503 503 EDO EDO . H 4 EDO A 1 504 504 EDO EDO . I 5 ANP A 1 380 380 ANP ANP . J 6 HOH A 1 505 1 HOH HOH . J 6 HOH A 2 506 2 HOH HOH . J 6 HOH A 3 507 3 HOH HOH . J 6 HOH A 4 508 4 HOH HOH . J 6 HOH A 5 509 5 HOH HOH . J 6 HOH A 6 510 6 HOH HOH . J 6 HOH A 7 511 7 HOH HOH . J 6 HOH A 8 512 8 HOH HOH . J 6 HOH A 9 513 9 HOH HOH . J 6 HOH A 10 514 10 HOH HOH . J 6 HOH A 11 515 11 HOH HOH . J 6 HOH A 12 516 12 HOH HOH . J 6 HOH A 13 517 13 HOH HOH . J 6 HOH A 14 518 14 HOH HOH . J 6 HOH A 15 519 15 HOH HOH . J 6 HOH A 16 520 16 HOH HOH . J 6 HOH A 17 521 17 HOH HOH . J 6 HOH A 18 522 18 HOH HOH . J 6 HOH A 19 523 19 HOH HOH . J 6 HOH A 20 524 20 HOH HOH . J 6 HOH A 21 525 21 HOH HOH . J 6 HOH A 22 526 22 HOH HOH . J 6 HOH A 23 527 23 HOH HOH . J 6 HOH A 24 528 24 HOH HOH . J 6 HOH A 25 529 25 HOH HOH . J 6 HOH A 26 530 26 HOH HOH . J 6 HOH A 27 531 27 HOH HOH . J 6 HOH A 28 532 28 HOH HOH . J 6 HOH A 29 533 29 HOH HOH . J 6 HOH A 30 534 30 HOH HOH . J 6 HOH A 31 535 31 HOH HOH . J 6 HOH A 32 536 32 HOH HOH . J 6 HOH A 33 537 33 HOH HOH . J 6 HOH A 34 538 34 HOH HOH . J 6 HOH A 35 539 35 HOH HOH . J 6 HOH A 36 540 36 HOH HOH . J 6 HOH A 37 541 37 HOH HOH . J 6 HOH A 38 542 38 HOH HOH . J 6 HOH A 39 543 39 HOH HOH . J 6 HOH A 40 544 40 HOH HOH . J 6 HOH A 41 545 41 HOH HOH . J 6 HOH A 42 546 42 HOH HOH . J 6 HOH A 43 547 43 HOH HOH . J 6 HOH A 44 548 44 HOH HOH . J 6 HOH A 45 549 45 HOH HOH . J 6 HOH A 46 550 46 HOH HOH . J 6 HOH A 47 551 47 HOH HOH . J 6 HOH A 48 552 48 HOH HOH . J 6 HOH A 49 553 49 HOH HOH . J 6 HOH A 50 554 50 HOH HOH . J 6 HOH A 51 555 51 HOH HOH . J 6 HOH A 52 556 52 HOH HOH . J 6 HOH A 53 557 53 HOH HOH . J 6 HOH A 54 558 54 HOH HOH . J 6 HOH A 55 559 55 HOH HOH . J 6 HOH A 56 560 56 HOH HOH . J 6 HOH A 57 561 57 HOH HOH . J 6 HOH A 58 562 58 HOH HOH . J 6 HOH A 59 563 59 HOH HOH . J 6 HOH A 60 564 60 HOH HOH . J 6 HOH A 61 565 61 HOH HOH . J 6 HOH A 62 566 62 HOH HOH . J 6 HOH A 63 567 63 HOH HOH . J 6 HOH A 64 568 64 HOH HOH . J 6 HOH A 65 569 65 HOH HOH . J 6 HOH A 66 570 66 HOH HOH . J 6 HOH A 67 571 67 HOH HOH . J 6 HOH A 68 572 68 HOH HOH . J 6 HOH A 69 573 69 HOH HOH . J 6 HOH A 70 574 70 HOH HOH . J 6 HOH A 71 575 71 HOH HOH . J 6 HOH A 72 576 72 HOH HOH . J 6 HOH A 73 577 73 HOH HOH . J 6 HOH A 74 578 74 HOH HOH . J 6 HOH A 75 579 75 HOH HOH . J 6 HOH A 76 580 76 HOH HOH . J 6 HOH A 77 581 77 HOH HOH . J 6 HOH A 78 582 78 HOH HOH . J 6 HOH A 79 583 79 HOH HOH . J 6 HOH A 80 584 80 HOH HOH . J 6 HOH A 81 585 81 HOH HOH . J 6 HOH A 82 586 82 HOH HOH . J 6 HOH A 83 587 83 HOH HOH . J 6 HOH A 84 588 84 HOH HOH . J 6 HOH A 85 589 85 HOH HOH . J 6 HOH A 86 590 86 HOH HOH . J 6 HOH A 87 591 87 HOH HOH . J 6 HOH A 88 592 88 HOH HOH . J 6 HOH A 89 593 89 HOH HOH . J 6 HOH A 90 594 90 HOH HOH . J 6 HOH A 91 595 91 HOH HOH . J 6 HOH A 92 596 92 HOH HOH . J 6 HOH A 93 597 93 HOH HOH . J 6 HOH A 94 598 94 HOH HOH . J 6 HOH A 95 599 95 HOH HOH . J 6 HOH A 96 600 96 HOH HOH . J 6 HOH A 97 601 97 HOH HOH . J 6 HOH A 98 602 98 HOH HOH . J 6 HOH A 99 603 99 HOH HOH . J 6 HOH A 100 604 100 HOH HOH . J 6 HOH A 101 605 101 HOH HOH . J 6 HOH A 102 606 102 HOH HOH . J 6 HOH A 103 607 103 HOH HOH . J 6 HOH A 104 608 104 HOH HOH . J 6 HOH A 105 609 105 HOH HOH . J 6 HOH A 106 610 106 HOH HOH . J 6 HOH A 107 611 107 HOH HOH . J 6 HOH A 108 612 108 HOH HOH . J 6 HOH A 109 613 109 HOH HOH . J 6 HOH A 110 614 110 HOH HOH . J 6 HOH A 111 615 111 HOH HOH . J 6 HOH A 112 616 112 HOH HOH . J 6 HOH A 113 617 113 HOH HOH . J 6 HOH A 114 618 114 HOH HOH . J 6 HOH A 115 619 115 HOH HOH . J 6 HOH A 116 620 116 HOH HOH . J 6 HOH A 117 621 117 HOH HOH . J 6 HOH A 118 622 118 HOH HOH . J 6 HOH A 119 623 119 HOH HOH . J 6 HOH A 120 624 120 HOH HOH . J 6 HOH A 121 625 121 HOH HOH . J 6 HOH A 122 626 122 HOH HOH . J 6 HOH A 123 627 123 HOH HOH . J 6 HOH A 124 628 124 HOH HOH . J 6 HOH A 125 629 125 HOH HOH . J 6 HOH A 126 630 126 HOH HOH . J 6 HOH A 127 631 127 HOH HOH . J 6 HOH A 128 632 128 HOH HOH . J 6 HOH A 129 633 129 HOH HOH . J 6 HOH A 130 634 130 HOH HOH . J 6 HOH A 131 635 131 HOH HOH . J 6 HOH A 132 636 132 HOH HOH . J 6 HOH A 133 637 133 HOH HOH . J 6 HOH A 134 638 134 HOH HOH . J 6 HOH A 135 639 135 HOH HOH . J 6 HOH A 136 640 136 HOH HOH . J 6 HOH A 137 641 137 HOH HOH . J 6 HOH A 138 642 138 HOH HOH . J 6 HOH A 139 643 139 HOH HOH . J 6 HOH A 140 644 140 HOH HOH . J 6 HOH A 141 645 141 HOH HOH . J 6 HOH A 142 646 142 HOH HOH . J 6 HOH A 143 647 143 HOH HOH . J 6 HOH A 144 648 144 HOH HOH . J 6 HOH A 145 649 145 HOH HOH . J 6 HOH A 146 650 146 HOH HOH . J 6 HOH A 147 651 147 HOH HOH . J 6 HOH A 148 652 148 HOH HOH . J 6 HOH A 149 653 149 HOH HOH . J 6 HOH A 150 654 150 HOH HOH . J 6 HOH A 151 655 151 HOH HOH . J 6 HOH A 152 656 152 HOH HOH . J 6 HOH A 153 657 153 HOH HOH . J 6 HOH A 154 658 154 HOH HOH . J 6 HOH A 155 659 155 HOH HOH . J 6 HOH A 156 660 156 HOH HOH . J 6 HOH A 157 661 157 HOH HOH . J 6 HOH A 158 662 158 HOH HOH . J 6 HOH A 159 663 159 HOH HOH . J 6 HOH A 160 664 160 HOH HOH . J 6 HOH A 161 665 161 HOH HOH . J 6 HOH A 162 666 162 HOH HOH . J 6 HOH A 163 667 163 HOH HOH . J 6 HOH A 164 668 164 HOH HOH . J 6 HOH A 165 669 165 HOH HOH . J 6 HOH A 166 670 166 HOH HOH . J 6 HOH A 167 671 167 HOH HOH . J 6 HOH A 168 672 168 HOH HOH . J 6 HOH A 169 673 169 HOH HOH . J 6 HOH A 170 674 170 HOH HOH . J 6 HOH A 171 675 171 HOH HOH . J 6 HOH A 172 676 172 HOH HOH . J 6 HOH A 173 677 173 HOH HOH . J 6 HOH A 174 678 174 HOH HOH . J 6 HOH A 175 679 175 HOH HOH . J 6 HOH A 176 680 176 HOH HOH . J 6 HOH A 177 681 177 HOH HOH . J 6 HOH A 178 682 178 HOH HOH . J 6 HOH A 179 683 179 HOH HOH . J 6 HOH A 180 684 180 HOH HOH . J 6 HOH A 181 685 181 HOH HOH . J 6 HOH A 182 686 182 HOH HOH . J 6 HOH A 183 687 183 HOH HOH . J 6 HOH A 184 688 184 HOH HOH . J 6 HOH A 185 689 185 HOH HOH . J 6 HOH A 186 690 186 HOH HOH . J 6 HOH A 187 691 187 HOH HOH . J 6 HOH A 188 692 188 HOH HOH . J 6 HOH A 189 693 189 HOH HOH . J 6 HOH A 190 694 190 HOH HOH . J 6 HOH A 191 695 191 HOH HOH . J 6 HOH A 192 696 192 HOH HOH . J 6 HOH A 193 697 193 HOH HOH . J 6 HOH A 194 698 194 HOH HOH . J 6 HOH A 195 699 195 HOH HOH . J 6 HOH A 196 700 196 HOH HOH . J 6 HOH A 197 701 197 HOH HOH . J 6 HOH A 198 702 198 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . G 4 -23.529 28.448 71.904 1 45.9 ? C1 EDO 503 A 1 HETATM 2 O O1 EDO . . . G 4 -24.854 28.98 71.712 1 47.49 ? O1 EDO 503 A 1 HETATM 3 C C2 EDO . . . G 4 -22.648 29.5 72.493 1 44.88 ? C2 EDO 503 A 1 HETATM 4 O O2 EDO . . . G 4 -22.496 30.712 71.692 1 44.96 ? O2 EDO 503 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #