data_1NHJ # _model_server_result.job_id ixfq1Y4VxNze8cENCs-bAA _model_server_result.datetime_utc '2024-12-22 06:04:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1nhj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":390}' # _entry.id 1NHJ # _exptl.entry_id 1NHJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1NHJ _cell.length_a 62.338 _cell.length_b 72.64 _cell.length_c 190.788 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NHJ _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 72.64 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 35 A ASN 33 1_555 C MG MG . A MG 370 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc2 A O ALA 73 A ALA 71 1_555 B NA NA . A NA 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.745 ? metalc ? metalc3 A O ALA 75 A ALA 73 1_555 B NA NA . A NA 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.785 ? metalc ? metalc4 A O ALA 78 A ALA 76 1_555 B NA NA . A NA 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.869 ? metalc ? metalc5 C MG MG . A MG 370 1_555 D O2B ANP . A ANP 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.501 ? metalc ? metalc6 C MG MG . A MG 370 1_555 D O2G ANP . A ANP 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc7 C MG MG . A MG 370 1_555 D O1A ANP . A ANP 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? metalc ? metalc8 C MG MG . A MG 370 1_555 E O HOH . A HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc9 C MG MG . A MG 370 1_555 E O HOH . A HOH 436 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc10 D O2A ANP . A ANP 380 1_555 B NA NA . A NA 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.873 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1NHJ _atom_sites.fract_transf_matrix[1][1] 0.016042 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013767 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005241 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 390 390 NA NA . C 3 MG A 1 370 370 MG MG . D 4 ANP A 1 380 380 ANP ANP . E 5 HOH A 1 391 102 HOH HOH . E 5 HOH A 2 392 104 HOH HOH . E 5 HOH A 3 393 106 HOH HOH . E 5 HOH A 4 394 107 HOH HOH . E 5 HOH A 5 395 108 HOH HOH . E 5 HOH A 6 396 109 HOH HOH . E 5 HOH A 7 397 110 HOH HOH . E 5 HOH A 8 398 111 HOH HOH . E 5 HOH A 9 399 112 HOH HOH . E 5 HOH A 10 400 113 HOH HOH . E 5 HOH A 11 401 114 HOH HOH . E 5 HOH A 12 402 115 HOH HOH . E 5 HOH A 13 403 116 HOH HOH . E 5 HOH A 14 404 117 HOH HOH . E 5 HOH A 15 405 118 HOH HOH . E 5 HOH A 16 406 119 HOH HOH . E 5 HOH A 17 407 120 HOH HOH . E 5 HOH A 18 408 121 HOH HOH . E 5 HOH A 19 409 122 HOH HOH . E 5 HOH A 20 410 123 HOH HOH . E 5 HOH A 21 411 124 HOH HOH . E 5 HOH A 22 412 125 HOH HOH . E 5 HOH A 23 413 126 HOH HOH . E 5 HOH A 24 414 127 HOH HOH . E 5 HOH A 25 415 128 HOH HOH . E 5 HOH A 26 416 129 HOH HOH . E 5 HOH A 27 417 130 HOH HOH . E 5 HOH A 28 418 131 HOH HOH . E 5 HOH A 29 419 132 HOH HOH . E 5 HOH A 30 420 133 HOH HOH . E 5 HOH A 31 421 134 HOH HOH . E 5 HOH A 32 422 135 HOH HOH . E 5 HOH A 33 423 136 HOH HOH . E 5 HOH A 34 424 137 HOH HOH . E 5 HOH A 35 425 138 HOH HOH . E 5 HOH A 36 426 139 HOH HOH . E 5 HOH A 37 427 140 HOH HOH . E 5 HOH A 38 428 141 HOH HOH . E 5 HOH A 39 429 143 HOH HOH . E 5 HOH A 40 430 144 HOH HOH . E 5 HOH A 41 431 146 HOH HOH . E 5 HOH A 42 432 147 HOH HOH . E 5 HOH A 43 433 148 HOH HOH . E 5 HOH A 44 434 149 HOH HOH . E 5 HOH A 45 435 150 HOH HOH . E 5 HOH A 46 436 151 HOH HOH . E 5 HOH A 47 437 152 HOH HOH . E 5 HOH A 48 438 154 HOH HOH . E 5 HOH A 49 439 155 HOH HOH . E 5 HOH A 50 440 156 HOH HOH . E 5 HOH A 51 441 157 HOH HOH . E 5 HOH A 52 442 158 HOH HOH . E 5 HOH A 53 443 160 HOH HOH . E 5 HOH A 54 444 161 HOH HOH . E 5 HOH A 55 445 162 HOH HOH . E 5 HOH A 56 446 163 HOH HOH . E 5 HOH A 57 447 164 HOH HOH . E 5 HOH A 58 448 165 HOH HOH . E 5 HOH A 59 449 166 HOH HOH . E 5 HOH A 60 450 167 HOH HOH . E 5 HOH A 61 451 168 HOH HOH . E 5 HOH A 62 452 171 HOH HOH . E 5 HOH A 63 453 172 HOH HOH . E 5 HOH A 64 454 173 HOH HOH . E 5 HOH A 65 455 174 HOH HOH . E 5 HOH A 66 456 175 HOH HOH . E 5 HOH A 67 457 176 HOH HOH . E 5 HOH A 68 458 177 HOH HOH . E 5 HOH A 69 459 178 HOH HOH . E 5 HOH A 70 460 180 HOH HOH . E 5 HOH A 71 461 181 HOH HOH . E 5 HOH A 72 462 182 HOH HOH . E 5 HOH A 73 463 183 HOH HOH . E 5 HOH A 74 464 184 HOH HOH . E 5 HOH A 75 465 185 HOH HOH . E 5 HOH A 76 466 186 HOH HOH . E 5 HOH A 77 467 187 HOH HOH . E 5 HOH A 78 468 188 HOH HOH . E 5 HOH A 79 469 189 HOH HOH . E 5 HOH A 80 470 190 HOH HOH . E 5 HOH A 81 471 191 HOH HOH . E 5 HOH A 82 472 192 HOH HOH . E 5 HOH A 83 473 193 HOH HOH . E 5 HOH A 84 474 194 HOH HOH . E 5 HOH A 85 475 197 HOH HOH . E 5 HOH A 86 476 198 HOH HOH . E 5 HOH A 87 477 200 HOH HOH . E 5 HOH A 88 478 201 HOH HOH . E 5 HOH A 89 479 203 HOH HOH . E 5 HOH A 90 480 205 HOH HOH . E 5 HOH A 91 481 206 HOH HOH . E 5 HOH A 92 482 207 HOH HOH . E 5 HOH A 93 483 208 HOH HOH . E 5 HOH A 94 484 210 HOH HOH . E 5 HOH A 95 485 211 HOH HOH . E 5 HOH A 96 486 212 HOH HOH . E 5 HOH A 97 487 213 HOH HOH . E 5 HOH A 98 488 214 HOH HOH . E 5 HOH A 99 489 215 HOH HOH . E 5 HOH A 100 490 216 HOH HOH . E 5 HOH A 101 491 218 HOH HOH . E 5 HOH A 102 492 220 HOH HOH . E 5 HOH A 103 493 221 HOH HOH . E 5 HOH A 104 494 223 HOH HOH . E 5 HOH A 105 495 224 HOH HOH . E 5 HOH A 106 496 226 HOH HOH . E 5 HOH A 107 497 227 HOH HOH . E 5 HOH A 108 498 228 HOH HOH . E 5 HOH A 109 499 229 HOH HOH . E 5 HOH A 110 500 230 HOH HOH . E 5 HOH A 111 501 232 HOH HOH . E 5 HOH A 112 502 233 HOH HOH . E 5 HOH A 113 503 234 HOH HOH . E 5 HOH A 114 504 235 HOH HOH . E 5 HOH A 115 505 236 HOH HOH . E 5 HOH A 116 506 237 HOH HOH . E 5 HOH A 117 507 238 HOH HOH . E 5 HOH A 118 508 239 HOH HOH . E 5 HOH A 119 509 240 HOH HOH . E 5 HOH A 120 510 241 HOH HOH . E 5 HOH A 121 511 242 HOH HOH . E 5 HOH A 122 512 243 HOH HOH . E 5 HOH A 123 513 244 HOH HOH . E 5 HOH A 124 514 245 HOH HOH . E 5 HOH A 125 515 246 HOH HOH . E 5 HOH A 126 516 247 HOH HOH . E 5 HOH A 127 517 249 HOH HOH . E 5 HOH A 128 518 251 HOH HOH . E 5 HOH A 129 519 252 HOH HOH . E 5 HOH A 130 520 254 HOH HOH . E 5 HOH A 131 521 255 HOH HOH . E 5 HOH A 132 522 257 HOH HOH . E 5 HOH A 133 523 258 HOH HOH . E 5 HOH A 134 524 260 HOH HOH . E 5 HOH A 135 525 261 HOH HOH . E 5 HOH A 136 526 262 HOH HOH . E 5 HOH A 137 527 263 HOH HOH . E 5 HOH A 138 528 264 HOH HOH . E 5 HOH A 139 529 265 HOH HOH . E 5 HOH A 140 530 266 HOH HOH . E 5 HOH A 141 531 267 HOH HOH . E 5 HOH A 142 532 268 HOH HOH . E 5 HOH A 143 533 269 HOH HOH . E 5 HOH A 144 534 270 HOH HOH . E 5 HOH A 145 535 272 HOH HOH . E 5 HOH A 146 536 273 HOH HOH . E 5 HOH A 147 537 274 HOH HOH . E 5 HOH A 148 538 275 HOH HOH . E 5 HOH A 149 539 276 HOH HOH . E 5 HOH A 150 540 277 HOH HOH . E 5 HOH A 151 541 278 HOH HOH . E 5 HOH A 152 542 279 HOH HOH . E 5 HOH A 153 543 280 HOH HOH . E 5 HOH A 154 544 281 HOH HOH . E 5 HOH A 155 545 282 HOH HOH . E 5 HOH A 156 546 283 HOH HOH . E 5 HOH A 157 547 285 HOH HOH . E 5 HOH A 158 548 287 HOH HOH . E 5 HOH A 159 549 288 HOH HOH . E 5 HOH A 160 550 289 HOH HOH . E 5 HOH A 161 551 290 HOH HOH . E 5 HOH A 162 552 292 HOH HOH . E 5 HOH A 163 553 293 HOH HOH . E 5 HOH A 164 554 294 HOH HOH . E 5 HOH A 165 555 295 HOH HOH . E 5 HOH A 166 556 296 HOH HOH . E 5 HOH A 167 557 297 HOH HOH . E 5 HOH A 168 558 298 HOH HOH . E 5 HOH A 169 559 299 HOH HOH . E 5 HOH A 170 560 300 HOH HOH . E 5 HOH A 171 561 301 HOH HOH . E 5 HOH A 172 562 302 HOH HOH . E 5 HOH A 173 563 303 HOH HOH . E 5 HOH A 174 564 305 HOH HOH . E 5 HOH A 175 565 306 HOH HOH . E 5 HOH A 176 566 307 HOH HOH . E 5 HOH A 177 567 308 HOH HOH . E 5 HOH A 178 568 309 HOH HOH . E 5 HOH A 179 569 311 HOH HOH . E 5 HOH A 180 570 313 HOH HOH . E 5 HOH A 181 571 314 HOH HOH . E 5 HOH A 182 572 317 HOH HOH . E 5 HOH A 183 573 318 HOH HOH . E 5 HOH A 184 574 320 HOH HOH . E 5 HOH A 185 575 321 HOH HOH . E 5 HOH A 186 576 322 HOH HOH . E 5 HOH A 187 577 323 HOH HOH . E 5 HOH A 188 578 324 HOH HOH . E 5 HOH A 189 579 325 HOH HOH . E 5 HOH A 190 580 326 HOH HOH . E 5 HOH A 191 581 327 HOH HOH . E 5 HOH A 192 582 330 HOH HOH . E 5 HOH A 193 583 331 HOH HOH . E 5 HOH A 194 584 332 HOH HOH . E 5 HOH A 195 585 333 HOH HOH . E 5 HOH A 196 586 334 HOH HOH . E 5 HOH A 197 587 335 HOH HOH . E 5 HOH A 198 588 336 HOH HOH . E 5 HOH A 199 589 337 HOH HOH . E 5 HOH A 200 590 338 HOH HOH . E 5 HOH A 201 591 339 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -0.869 _atom_site.Cartn_y 25.584 _atom_site.Cartn_z 50.474 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 39.47 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 390 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #