data_1NHV # _model_server_result.job_id X4mjiaBVz1BEM_R2BeabxQ _model_server_result.datetime_utc '2025-02-27 07:05:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1nhv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":6001}' # _entry.id 1NHV # _exptl.entry_id 1NHV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 550.452 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-2-[(5-BENZOFURAN-2-YL-THIOPHEN-2-YLMETHYL)-(2,4-DICHLORO-BENZOYL)-AMINO]-3-PHENYL-PROPIONIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1NHV _cell.length_a 85.501 _cell.length_b 107.826 _cell.length_c 126.535 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NHV _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C 1 1 B,D 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 311 A CYS 303 1_555 A SG CYS 319 A CYS 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf2 B SG CYS 311 B CYS 303 1_555 B SG CYS 319 B CYS 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? # _chem_comp.formula 'C29 H21 Cl2 N O4 S' _chem_comp.formula_weight 550.452 _chem_comp.id 154 _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-2-[(5-BENZOFURAN-2-YL-THIOPHEN-2-YLMETHYL)-(2,4-DICHLORO-BENZOYL)-AMINO]-3-PHENYL-PROPIONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 154 sing 1 n n N1 C6 154 sing 2 n n N1 C23 154 sing 3 n n C2 C3 154 sing 4 n n C2 C16 154 sing 5 n n C2 H2 154 sing 6 n n C3 O4 154 doub 7 n n C3 O5 154 sing 8 n n O5 HO5 154 sing 9 n n C6 O7 154 doub 10 n n C6 C8 154 sing 11 n n C8 C9 154 doub 12 n y C8 C13 154 sing 13 n y C9 C10 154 sing 14 n y C9 H9 154 sing 15 n n C10 C11 154 doub 16 n y C10 H10 154 sing 17 n n C11 C12 154 sing 18 n y C11 CL14 154 sing 19 n n C12 C13 154 doub 20 n y C12 H12 154 sing 21 n n C13 CL15 154 sing 22 n n C16 C17 154 sing 23 n n C16 H161 154 sing 24 n n C16 H162 154 sing 25 n n C17 C18 154 doub 26 n y C17 C22 154 sing 27 n y C18 C19 154 sing 28 n y C18 H18 154 sing 29 n n C19 C20 154 doub 30 n y C19 H19 154 sing 31 n n C20 C21 154 sing 32 n y C20 H20 154 sing 33 n n C21 C22 154 doub 34 n y C21 H21 154 sing 35 n n C22 H22 154 sing 36 n n C23 C24 154 sing 37 n n C23 H231 154 sing 38 n n C23 H232 154 sing 39 n n C24 C25 154 doub 40 n y C24 S28 154 sing 41 n y C25 C26 154 sing 42 n y C25 H25 154 sing 43 n n C26 C27 154 doub 44 n y C26 H26 154 sing 45 n n C27 S28 154 sing 46 n y C27 C29 154 sing 47 n y C29 C30 154 doub 48 n y C29 O37 154 sing 49 n y C30 C31 154 sing 50 n y C30 H30 154 sing 51 n n C31 C32 154 doub 52 n y C31 C36 154 sing 53 n y C32 C33 154 sing 54 n y C32 H32 154 sing 55 n n C33 C34 154 doub 56 n y C33 H33 154 sing 57 n n C34 C35 154 sing 58 n y C34 H34 154 sing 59 n n C35 C36 154 doub 60 n y C35 H35 154 sing 61 n n C36 O37 154 sing 62 n y # _atom_sites.entry_id 1NHV _atom_sites.fract_transf_matrix[1][1] 0.011696 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009274 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007903 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 154 A 1 5001 5001 154 154 . D 2 154 B 1 6001 6001 154 154 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 154 . . . D 2 -6.38 34.708 -34.752 1 47.15 ? N1 154 6001 B 1 HETATM 2 C C2 154 . . . D 2 -6.486 34.165 -33.346 1 45.68 ? C2 154 6001 B 1 HETATM 3 C C3 154 . . . D 2 -5.066 34.082 -32.764 1 43.87 ? C3 154 6001 B 1 HETATM 4 O O4 154 . . . D 2 -4.89 33.575 -31.621 1 42.6 ? O4 154 6001 B 1 HETATM 5 O O5 154 . . . D 2 -4.151 34.553 -33.482 1 40.8 ? O5 154 6001 B 1 HETATM 6 C C6 154 . . . D 2 -6.436 36.112 -35.015 1 46.56 ? C6 154 6001 B 1 HETATM 7 O O7 154 . . . D 2 -6.009 36.613 -36.037 1 46.31 ? O7 154 6001 B 1 HETATM 8 C C8 154 . . . D 2 -7.05 37.09 -34.032 1 46.68 ? C8 154 6001 B 1 HETATM 9 C C9 154 . . . D 2 -6.171 37.695 -33.092 1 45.04 ? C9 154 6001 B 1 HETATM 10 C C10 154 . . . D 2 -6.656 38.62 -32.152 1 44.93 ? C10 154 6001 B 1 HETATM 11 C C11 154 . . . D 2 -8.032 38.935 -32.123 1 44.56 ? C11 154 6001 B 1 HETATM 12 C C12 154 . . . D 2 -8.93 38.346 -33.046 1 46.22 ? C12 154 6001 B 1 HETATM 13 C C13 154 . . . D 2 -8.454 37.409 -34 1 47.17 ? C13 154 6001 B 1 HETATM 14 CL CL14 154 . . . D 2 -8.604 40.059 -30.975 1 43.95 ? CL14 154 6001 B 1 HETATM 15 CL CL15 154 . . . D 2 -9.589 36.729 -35.096 1 50.81 ? CL15 154 6001 B 1 HETATM 16 C C16 154 . . . D 2 -7.281 32.791 -33.243 1 45.71 ? C16 154 6001 B 1 HETATM 17 C C17 154 . . . D 2 -8.82 32.804 -33.349 1 45.9 ? C17 154 6001 B 1 HETATM 18 C C18 154 . . . D 2 -9.546 31.567 -33.407 1 44.93 ? C18 154 6001 B 1 HETATM 19 C C19 154 . . . D 2 -10.968 31.55 -33.511 1 44.81 ? C19 154 6001 B 1 HETATM 20 C C20 154 . . . D 2 -11.695 32.771 -33.552 1 45.41 ? C20 154 6001 B 1 HETATM 21 C C21 154 . . . D 2 -10.998 34.007 -33.493 1 45.52 ? C21 154 6001 B 1 HETATM 22 C C22 154 . . . D 2 -9.58 34.021 -33.389 1 45.55 ? C22 154 6001 B 1 HETATM 23 C C23 154 . . . D 2 -6.116 33.674 -35.824 1 50.3 ? C23 154 6001 B 1 HETATM 24 C C24 154 . . . D 2 -7.03 33.654 -37.063 1 54.1 ? C24 154 6001 B 1 HETATM 25 C C25 154 . . . D 2 -7.683 34.709 -37.672 1 55.04 ? C25 154 6001 B 1 HETATM 26 C C26 154 . . . D 2 -8.452 34.351 -38.802 1 56.93 ? C26 154 6001 B 1 HETATM 27 C C27 154 . . . D 2 -8.387 33.018 -39.065 1 58.27 ? C27 154 6001 B 1 HETATM 28 S S28 154 . . . D 2 -7.385 32.192 -37.92 1 58.08 ? S28 154 6001 B 1 HETATM 29 C C29 154 . . . D 2 -9.039 32.393 -40.199 1 60.44 ? C29 154 6001 B 1 HETATM 30 C C30 154 . . . D 2 -8.582 31.305 -40.915 1 61.14 ? C30 154 6001 B 1 HETATM 31 C C31 154 . . . D 2 -9.594 31.048 -41.929 1 61.23 ? C31 154 6001 B 1 HETATM 32 C C32 154 . . . D 2 -9.714 30.075 -42.987 1 61.1 ? C32 154 6001 B 1 HETATM 33 C C33 154 . . . D 2 -10.879 30.122 -43.806 1 61.45 ? C33 154 6001 B 1 HETATM 34 C C34 154 . . . D 2 -11.891 31.138 -43.605 1 60.84 ? C34 154 6001 B 1 HETATM 35 C C35 154 . . . D 2 -11.764 32.108 -42.57 1 60.24 ? C35 154 6001 B 1 HETATM 36 C C36 154 . . . D 2 -10.584 32.056 -41.747 1 60.85 ? C36 154 6001 B 1 HETATM 37 O O37 154 . . . D 2 -10.251 32.862 -40.685 1 61.22 ? O37 154 6001 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 37 #