data_1NHZ # _model_server_result.job_id ticP0QDpynLbdnU7MkcEdA _model_server_result.datetime_utc '2024-10-12 16:37:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1nhz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":800}' # _entry.id 1NHZ # _exptl.entry_id 1NHZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 429.594 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '11-(4-DIMETHYLAMINO-PHENYL)-17-HYDROXY-13-METHYL-17-PROP-1-YNYL-1,2,6,7,8,11,12,13,14,15,16,17-DODEC AHYDRO-CYCLOPENTA[A]PHENANTHREN-3-ONE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1NHZ _cell.length_a 74.859 _cell.length_b 109.764 _cell.length_c 39.261 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NHZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA,PQS dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1 A,B,C,D,E,F 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C29 H35 N O2' _chem_comp.formula_weight 429.594 _chem_comp.id 486 _chem_comp.mon_nstd_flag . _chem_comp.name '11-(4-DIMETHYLAMINO-PHENYL)-17-HYDROXY-13-METHYL-17-PROP-1-YNYL-1,2,6,7,8,11,12,13,14,15,16,17-DODEC AHYDRO-CYCLOPENTA[A]PHENANTHREN-3-ONE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms RU-486;MIFEPRISTONE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O30 C2 486 doub 1 n n C2 C1 486 sing 2 n n C2 C3 486 sing 3 n n C1 C6 486 sing 4 n n C1 HC1A 486 sing 5 n n C1 HC12 486 sing 6 n n C3 C4 486 doub 7 n n C3 HC3 486 sing 8 n n C4 C7 486 sing 9 n n C4 C5 486 sing 10 n n C7 C8 486 sing 11 n n C7 HC71 486 sing 12 n n C7 HC72 486 sing 13 n n C5 C6 486 sing 14 n n C5 C10 486 doub 15 n n C6 HC61 486 sing 16 n n C6 HC62 486 sing 17 n n C10 C14 486 sing 18 n n C10 C9 486 sing 19 n n C14 C18 486 sing 20 n n C14 C13 486 sing 21 n n C14 HC14 486 sing 22 n n C18 C22 486 doub 23 n y C18 C26 486 sing 24 n y C22 C23 486 sing 25 n y C22 HC22 486 sing 26 n n C23 C24 486 doub 27 n y C23 HC23 486 sing 28 n n C24 N27 486 sing 29 n n C24 C25 486 sing 30 n y N27 C29 486 sing 31 n n N27 C28 486 sing 32 n n C29 H291 486 sing 33 n n C29 H292 486 sing 34 n n C29 H293 486 sing 35 n n C28 H281 486 sing 36 n n C28 H282 486 sing 37 n n C28 H283 486 sing 38 n n C25 C26 486 doub 39 n y C25 HC25 486 sing 40 n n C26 HC26 486 sing 41 n n C13 C12 486 sing 42 n n C13 H131 486 sing 43 n n C13 H132 486 sing 44 n n C12 C19 486 sing 45 n n C12 C17 486 sing 46 n n C12 C11 486 sing 47 n n C19 H191 486 sing 48 n n C19 H192 486 sing 49 n n C19 H193 486 sing 50 n n C17 C31 486 sing 51 n n C17 O3 486 sing 52 n n C17 C16 486 sing 53 n n C31 C30 486 trip 54 n n C30 C32 486 sing 55 n n C32 H321 486 sing 56 n n C32 H322 486 sing 57 n n C32 H323 486 sing 58 n n O3 HO3 486 sing 59 n n C16 C15 486 sing 60 n n C16 H161 486 sing 61 n n C16 H162 486 sing 62 n n C15 C11 486 sing 63 n n C15 H151 486 sing 64 n n C15 H152 486 sing 65 n n C11 C9 486 sing 66 n n C11 HC11 486 sing 67 n n C9 C8 486 sing 68 n n C9 HC9 486 sing 69 n n C8 HC81 486 sing 70 n n C8 HC82 486 sing 71 n n # _atom_sites.entry_id 1NHZ _atom_sites.fract_transf_matrix[1][1] 0.013358 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00911 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025471 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 486 A 1 800 800 486 486 . C 3 HEZ A 1 901 901 HEZ HXD . D 3 HEZ A 1 902 902 HEZ HXD . E 3 HEZ A 1 903 903 HEZ HXD . F 4 HOH A 1 1 1 HOH HOH . F 4 HOH A 2 2 2 HOH HOH . F 4 HOH A 3 3 3 HOH HOH . F 4 HOH A 4 4 4 HOH HOH . F 4 HOH A 5 5 5 HOH HOH . F 4 HOH A 6 6 6 HOH HOH . F 4 HOH A 7 7 7 HOH HOH . F 4 HOH A 8 8 8 HOH HOH . F 4 HOH A 9 9 9 HOH HOH . F 4 HOH A 10 10 10 HOH HOH . F 4 HOH A 11 11 11 HOH HOH . F 4 HOH A 12 12 12 HOH HOH . F 4 HOH A 13 13 13 HOH HOH . F 4 HOH A 14 14 14 HOH HOH . F 4 HOH A 15 15 15 HOH HOH . F 4 HOH A 16 16 16 HOH HOH . F 4 HOH A 17 17 17 HOH HOH . F 4 HOH A 18 18 18 HOH HOH . F 4 HOH A 19 19 19 HOH HOH . F 4 HOH A 20 20 20 HOH HOH . F 4 HOH A 21 21 21 HOH HOH . F 4 HOH A 22 22 22 HOH HOH . F 4 HOH A 23 23 23 HOH HOH . F 4 HOH A 24 24 24 HOH HOH . F 4 HOH A 25 25 25 HOH HOH . F 4 HOH A 26 26 26 HOH HOH . F 4 HOH A 27 27 27 HOH HOH . F 4 HOH A 28 28 28 HOH HOH . F 4 HOH A 29 29 29 HOH HOH . F 4 HOH A 30 30 30 HOH HOH . F 4 HOH A 31 31 31 HOH HOH . F 4 HOH A 32 32 32 HOH HOH . F 4 HOH A 33 33 33 HOH HOH . F 4 HOH A 34 34 34 HOH HOH . F 4 HOH A 35 35 35 HOH HOH . F 4 HOH A 36 36 36 HOH HOH . F 4 HOH A 37 37 37 HOH HOH . F 4 HOH A 38 38 38 HOH HOH . F 4 HOH A 39 39 39 HOH HOH . F 4 HOH A 40 40 40 HOH HOH . F 4 HOH A 41 41 41 HOH HOH . F 4 HOH A 42 42 42 HOH HOH . F 4 HOH A 43 43 43 HOH HOH . F 4 HOH A 44 44 44 HOH HOH . F 4 HOH A 45 45 45 HOH HOH . F 4 HOH A 46 46 46 HOH HOH . F 4 HOH A 47 47 47 HOH HOH . F 4 HOH A 48 48 48 HOH HOH . F 4 HOH A 49 49 49 HOH HOH . F 4 HOH A 50 50 50 HOH HOH . F 4 HOH A 51 51 51 HOH HOH . F 4 HOH A 52 52 52 HOH HOH . F 4 HOH A 53 53 53 HOH HOH . F 4 HOH A 54 54 54 HOH HOH . F 4 HOH A 55 55 55 HOH HOH . F 4 HOH A 56 56 56 HOH HOH . F 4 HOH A 57 57 57 HOH HOH . F 4 HOH A 58 58 58 HOH HOH . F 4 HOH A 59 59 59 HOH HOH . F 4 HOH A 60 60 60 HOH HOH . F 4 HOH A 61 61 61 HOH HOH . F 4 HOH A 62 62 62 HOH HOH . F 4 HOH A 63 63 63 HOH HOH . F 4 HOH A 64 64 64 HOH HOH . F 4 HOH A 65 65 65 HOH HOH . F 4 HOH A 66 66 66 HOH HOH . F 4 HOH A 67 67 67 HOH HOH . F 4 HOH A 68 68 68 HOH HOH . F 4 HOH A 69 69 69 HOH HOH . F 4 HOH A 70 70 70 HOH HOH . F 4 HOH A 71 71 71 HOH HOH . F 4 HOH A 72 72 72 HOH HOH . F 4 HOH A 73 73 73 HOH HOH . F 4 HOH A 74 74 74 HOH HOH . F 4 HOH A 75 75 75 HOH HOH . F 4 HOH A 76 76 76 HOH HOH . F 4 HOH A 77 77 77 HOH HOH . F 4 HOH A 78 78 78 HOH HOH . F 4 HOH A 79 79 79 HOH HOH . F 4 HOH A 80 80 80 HOH HOH . F 4 HOH A 81 81 81 HOH HOH . F 4 HOH A 82 82 82 HOH HOH . F 4 HOH A 83 83 83 HOH HOH . F 4 HOH A 84 84 84 HOH HOH . F 4 HOH A 85 85 85 HOH HOH . F 4 HOH A 86 86 86 HOH HOH . F 4 HOH A 87 87 87 HOH HOH . F 4 HOH A 88 88 88 HOH HOH . F 4 HOH A 89 89 89 HOH HOH . F 4 HOH A 90 90 90 HOH HOH . F 4 HOH A 91 91 91 HOH HOH . F 4 HOH A 92 92 92 HOH HOH . F 4 HOH A 93 93 93 HOH HOH . F 4 HOH A 94 94 94 HOH HOH . F 4 HOH A 95 95 95 HOH HOH . F 4 HOH A 96 96 96 HOH HOH . F 4 HOH A 97 97 97 HOH HOH . F 4 HOH A 98 98 98 HOH HOH . F 4 HOH A 99 99 99 HOH HOH . F 4 HOH A 100 100 100 HOH HOH . F 4 HOH A 101 101 101 HOH HOH . F 4 HOH A 102 102 102 HOH HOH . F 4 HOH A 103 103 103 HOH HOH . F 4 HOH A 104 104 104 HOH HOH . F 4 HOH A 105 105 105 HOH HOH . F 4 HOH A 106 106 106 HOH HOH . F 4 HOH A 107 107 107 HOH HOH . F 4 HOH A 108 108 108 HOH HOH . F 4 HOH A 109 109 109 HOH HOH . F 4 HOH A 110 110 110 HOH HOH . F 4 HOH A 111 111 111 HOH HOH . F 4 HOH A 112 112 112 HOH HOH . F 4 HOH A 113 113 113 HOH HOH . F 4 HOH A 114 114 114 HOH HOH . F 4 HOH A 115 115 115 HOH HOH . F 4 HOH A 116 116 116 HOH HOH . F 4 HOH A 117 117 117 HOH HOH . F 4 HOH A 118 118 118 HOH HOH . F 4 HOH A 119 119 119 HOH HOH . F 4 HOH A 120 120 120 HOH HOH . F 4 HOH A 121 121 2 HOH HOH . F 4 HOH A 122 122 3 HOH HOH . F 4 HOH A 123 123 4 HOH HOH . F 4 HOH A 124 124 5 HOH HOH . F 4 HOH A 125 125 6 HOH HOH . F 4 HOH A 126 126 7 HOH HOH . F 4 HOH A 127 127 8 HOH HOH . F 4 HOH A 128 128 9 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O30 486 . . . B 2 -4.583 18.217 3.52 1 21.16 ? O30 486 800 A 1 HETATM 2 C C2 486 . . . B 2 -3.993 17.199 3.713 1 17.7 ? C2 486 800 A 1 HETATM 3 C C1 486 . . . B 2 -4.701 15.838 4.087 1 21.75 ? C1 486 800 A 1 HETATM 4 C C3 486 . . . B 2 -2.502 17.082 3.534 1 17.61 ? C3 486 800 A 1 HETATM 5 C C4 486 . . . B 2 -1.997 15.856 3.229 1 16.75 ? C4 486 800 A 1 HETATM 6 C C7 486 . . . B 2 -0.439 15.746 3.105 1 15.79 ? C7 486 800 A 1 HETATM 7 C C5 486 . . . B 2 -2.936 14.701 3.175 1 16.44 ? C5 486 800 A 1 HETATM 8 C C6 486 . . . B 2 -4.475 15.066 2.84 1 17.47 ? C6 486 800 A 1 HETATM 9 C C10 486 . . . B 2 -2.412 13.438 3.488 1 15.58 ? C10 486 800 A 1 HETATM 10 C C14 486 . . . B 2 -3.239 12.007 3.531 1 15.16 ? C14 486 800 A 1 HETATM 11 C C18 486 . . . B 2 -3.191 11.406 2.071 1 16.16 ? C18 486 800 A 1 HETATM 12 C C22 486 . . . B 2 -2.334 12.025 1.058 1 13.89 ? C22 486 800 A 1 HETATM 13 C C23 486 . . . B 2 -2.173 11.511 -0.211 1 11.81 ? C23 486 800 A 1 HETATM 14 C C24 486 . . . B 2 -2.835 10.288 -0.595 1 13.05 ? C24 486 800 A 1 HETATM 15 N N27 486 . . . B 2 -2.779 9.715 -1.926 1 13.3 ? N27 486 800 A 1 HETATM 16 C C29 486 . . . B 2 -3.542 8.49 -2.177 1 14.92 ? C29 486 800 A 1 HETATM 17 C C28 486 . . . B 2 -2.371 10.51 -3.114 1 14.75 ? C28 486 800 A 1 HETATM 18 C C25 486 . . . B 2 -3.712 9.657 0.418 1 15.4 ? C25 486 800 A 1 HETATM 19 C C26 486 . . . B 2 -3.862 10.189 1.721 1 15.03 ? C26 486 800 A 1 HETATM 20 C C13 486 . . . B 2 -2.646 11.054 4.596 1 13.16 ? C13 486 800 A 1 HETATM 21 C C12 486 . . . B 2 -1.136 11.038 5.007 1 14.15 ? C12 486 800 A 1 HETATM 22 C C19 486 . . . B 2 -0.417 10.11 3.858 1 11.29 ? C19 486 800 A 1 HETATM 23 C C17 486 . . . B 2 -0.853 10.348 6.38 1 14.32 ? C17 486 800 A 1 HETATM 24 C C31 486 . . . B 2 -1.587 10.882 7.598 1 12.67 ? C31 486 800 A 1 HETATM 25 C C30 486 . . . B 2 -2.485 11.042 8.391 1 12.72 ? C30 486 800 A 1 HETATM 26 C C32 486 . . . B 2 -3.164 11.448 9.656 1 11.86 ? C32 486 800 A 1 HETATM 27 O O3 486 . . . B 2 -0.92 8.898 6.308 1 14.33 ? O3 486 800 A 1 HETATM 28 C C16 486 . . . B 2 0.623 10.861 6.467 1 12.46 ? C16 486 800 A 1 HETATM 29 C C15 486 . . . B 2 0.684 12.259 5.776 1 14.27 ? C15 486 800 A 1 HETATM 30 C C11 486 . . . B 2 -0.762 12.555 5.197 1 14.4 ? C11 486 800 A 1 HETATM 31 C C9 486 . . . B 2 -0.819 13.359 3.895 1 14.75 ? C9 486 800 A 1 HETATM 32 C C8 486 . . . B 2 -0.045 14.723 4.134 1 16.01 ? C8 486 800 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 32 #