data_1NHZ # _model_server_result.job_id z5TDPxFjIYk_nWxYrpMwsA _model_server_result.datetime_utc '2024-12-02 17:47:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1nhz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":902}' # _entry.id 1NHZ # _exptl.entry_id 1NHZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 118.174 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HEXANE-1,6-DIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1NHZ _cell.length_a 74.859 _cell.length_b 109.764 _cell.length_c 39.261 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NHZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA,PQS dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1 A,B,C,D,E,F 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # _chem_comp.formula 'C6 H14 O2' _chem_comp.formula_weight 118.174 _chem_comp.id HEZ _chem_comp.mon_nstd_flag . _chem_comp.name HEXANE-1,6-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 HEZ sing 200 n n O1 HO1 HEZ sing 201 n n C1 C2 HEZ sing 202 n n C1 H11 HEZ sing 203 n n C1 H12 HEZ sing 204 n n C2 C3 HEZ sing 205 n n C2 H21 HEZ sing 206 n n C2 H22 HEZ sing 207 n n C3 C4 HEZ sing 208 n n C3 H31 HEZ sing 209 n n C3 H32 HEZ sing 210 n n C4 C5 HEZ sing 211 n n C4 H41 HEZ sing 212 n n C4 H42 HEZ sing 213 n n C5 C6 HEZ sing 214 n n C5 H51 HEZ sing 215 n n C5 H52 HEZ sing 216 n n C6 O6 HEZ sing 217 n n C6 H61 HEZ sing 218 n n C6 H62 HEZ sing 219 n n O6 HO6 HEZ sing 220 n n # _atom_sites.entry_id 1NHZ _atom_sites.fract_transf_matrix[1][1] 0.013358 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00911 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025471 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 486 A 1 800 800 486 486 . C 3 HEZ A 1 901 901 HEZ HXD . D 3 HEZ A 1 902 902 HEZ HXD . E 3 HEZ A 1 903 903 HEZ HXD . F 4 HOH A 1 1 1 HOH HOH . F 4 HOH A 2 2 2 HOH HOH . F 4 HOH A 3 3 3 HOH HOH . F 4 HOH A 4 4 4 HOH HOH . F 4 HOH A 5 5 5 HOH HOH . F 4 HOH A 6 6 6 HOH HOH . F 4 HOH A 7 7 7 HOH HOH . F 4 HOH A 8 8 8 HOH HOH . F 4 HOH A 9 9 9 HOH HOH . F 4 HOH A 10 10 10 HOH HOH . F 4 HOH A 11 11 11 HOH HOH . F 4 HOH A 12 12 12 HOH HOH . F 4 HOH A 13 13 13 HOH HOH . F 4 HOH A 14 14 14 HOH HOH . F 4 HOH A 15 15 15 HOH HOH . F 4 HOH A 16 16 16 HOH HOH . F 4 HOH A 17 17 17 HOH HOH . F 4 HOH A 18 18 18 HOH HOH . F 4 HOH A 19 19 19 HOH HOH . F 4 HOH A 20 20 20 HOH HOH . F 4 HOH A 21 21 21 HOH HOH . F 4 HOH A 22 22 22 HOH HOH . F 4 HOH A 23 23 23 HOH HOH . F 4 HOH A 24 24 24 HOH HOH . F 4 HOH A 25 25 25 HOH HOH . F 4 HOH A 26 26 26 HOH HOH . F 4 HOH A 27 27 27 HOH HOH . F 4 HOH A 28 28 28 HOH HOH . F 4 HOH A 29 29 29 HOH HOH . F 4 HOH A 30 30 30 HOH HOH . F 4 HOH A 31 31 31 HOH HOH . F 4 HOH A 32 32 32 HOH HOH . F 4 HOH A 33 33 33 HOH HOH . F 4 HOH A 34 34 34 HOH HOH . F 4 HOH A 35 35 35 HOH HOH . F 4 HOH A 36 36 36 HOH HOH . F 4 HOH A 37 37 37 HOH HOH . F 4 HOH A 38 38 38 HOH HOH . F 4 HOH A 39 39 39 HOH HOH . F 4 HOH A 40 40 40 HOH HOH . F 4 HOH A 41 41 41 HOH HOH . F 4 HOH A 42 42 42 HOH HOH . F 4 HOH A 43 43 43 HOH HOH . F 4 HOH A 44 44 44 HOH HOH . F 4 HOH A 45 45 45 HOH HOH . F 4 HOH A 46 46 46 HOH HOH . F 4 HOH A 47 47 47 HOH HOH . F 4 HOH A 48 48 48 HOH HOH . F 4 HOH A 49 49 49 HOH HOH . F 4 HOH A 50 50 50 HOH HOH . F 4 HOH A 51 51 51 HOH HOH . F 4 HOH A 52 52 52 HOH HOH . F 4 HOH A 53 53 53 HOH HOH . F 4 HOH A 54 54 54 HOH HOH . F 4 HOH A 55 55 55 HOH HOH . F 4 HOH A 56 56 56 HOH HOH . F 4 HOH A 57 57 57 HOH HOH . F 4 HOH A 58 58 58 HOH HOH . F 4 HOH A 59 59 59 HOH HOH . F 4 HOH A 60 60 60 HOH HOH . F 4 HOH A 61 61 61 HOH HOH . F 4 HOH A 62 62 62 HOH HOH . F 4 HOH A 63 63 63 HOH HOH . F 4 HOH A 64 64 64 HOH HOH . F 4 HOH A 65 65 65 HOH HOH . F 4 HOH A 66 66 66 HOH HOH . F 4 HOH A 67 67 67 HOH HOH . F 4 HOH A 68 68 68 HOH HOH . F 4 HOH A 69 69 69 HOH HOH . F 4 HOH A 70 70 70 HOH HOH . F 4 HOH A 71 71 71 HOH HOH . F 4 HOH A 72 72 72 HOH HOH . F 4 HOH A 73 73 73 HOH HOH . F 4 HOH A 74 74 74 HOH HOH . F 4 HOH A 75 75 75 HOH HOH . F 4 HOH A 76 76 76 HOH HOH . F 4 HOH A 77 77 77 HOH HOH . F 4 HOH A 78 78 78 HOH HOH . F 4 HOH A 79 79 79 HOH HOH . F 4 HOH A 80 80 80 HOH HOH . F 4 HOH A 81 81 81 HOH HOH . F 4 HOH A 82 82 82 HOH HOH . F 4 HOH A 83 83 83 HOH HOH . F 4 HOH A 84 84 84 HOH HOH . F 4 HOH A 85 85 85 HOH HOH . F 4 HOH A 86 86 86 HOH HOH . F 4 HOH A 87 87 87 HOH HOH . F 4 HOH A 88 88 88 HOH HOH . F 4 HOH A 89 89 89 HOH HOH . F 4 HOH A 90 90 90 HOH HOH . F 4 HOH A 91 91 91 HOH HOH . F 4 HOH A 92 92 92 HOH HOH . F 4 HOH A 93 93 93 HOH HOH . F 4 HOH A 94 94 94 HOH HOH . F 4 HOH A 95 95 95 HOH HOH . F 4 HOH A 96 96 96 HOH HOH . F 4 HOH A 97 97 97 HOH HOH . F 4 HOH A 98 98 98 HOH HOH . F 4 HOH A 99 99 99 HOH HOH . F 4 HOH A 100 100 100 HOH HOH . F 4 HOH A 101 101 101 HOH HOH . F 4 HOH A 102 102 102 HOH HOH . F 4 HOH A 103 103 103 HOH HOH . F 4 HOH A 104 104 104 HOH HOH . F 4 HOH A 105 105 105 HOH HOH . F 4 HOH A 106 106 106 HOH HOH . F 4 HOH A 107 107 107 HOH HOH . F 4 HOH A 108 108 108 HOH HOH . F 4 HOH A 109 109 109 HOH HOH . F 4 HOH A 110 110 110 HOH HOH . F 4 HOH A 111 111 111 HOH HOH . F 4 HOH A 112 112 112 HOH HOH . F 4 HOH A 113 113 113 HOH HOH . F 4 HOH A 114 114 114 HOH HOH . F 4 HOH A 115 115 115 HOH HOH . F 4 HOH A 116 116 116 HOH HOH . F 4 HOH A 117 117 117 HOH HOH . F 4 HOH A 118 118 118 HOH HOH . F 4 HOH A 119 119 119 HOH HOH . F 4 HOH A 120 120 120 HOH HOH . F 4 HOH A 121 121 2 HOH HOH . F 4 HOH A 122 122 3 HOH HOH . F 4 HOH A 123 123 4 HOH HOH . F 4 HOH A 124 124 5 HOH HOH . F 4 HOH A 125 125 6 HOH HOH . F 4 HOH A 126 126 7 HOH HOH . F 4 HOH A 127 127 8 HOH HOH . F 4 HOH A 128 128 9 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 HEZ . . . D 3 13.005 14.424 -2.864 1 31.24 ? O1 HEZ 902 A 1 HETATM 2 C C1 HEZ . . . D 3 12.626 13.092 -2.599 1 31.08 ? C1 HEZ 902 A 1 HETATM 3 C C2 HEZ . . . D 3 11.162 12.996 -2.945 1 30.81 ? C2 HEZ 902 A 1 HETATM 4 C C3 HEZ . . . D 3 10.572 11.652 -2.523 1 27.71 ? C3 HEZ 902 A 1 HETATM 5 C C4 HEZ . . . D 3 9.161 11.485 -3.088 1 25.38 ? C4 HEZ 902 A 1 HETATM 6 C C5 HEZ . . . D 3 8.181 12.346 -2.341 1 23.98 ? C5 HEZ 902 A 1 HETATM 7 C C6 HEZ . . . D 3 6.708 12.247 -2.842 1 24.28 ? C6 HEZ 902 A 1 HETATM 8 O O6 HEZ . . . D 3 6.234 13.604 -3.109 1 19.26 ? O6 HEZ 902 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 8 #