data_1NIK # _model_server_result.job_id 43RI2ZgqAujBvNMhklA0Eg _model_server_result.datetime_utc '2024-10-12 16:37:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1nik # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":204}' # _entry.id 1NIK # _exptl.entry_id 1NIK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 13 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1NIK _cell.length_a 224.098 _cell.length_b 394.462 _cell.length_c 284.343 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NIK _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 13 M N N ? 13 N N N ? 13 O N N ? 13 P N N ? 13 Q N N ? 13 R N N ? 13 S N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 I SG CYS 29 I CYS 29 1_555 I SG CYS 32 I CYS 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.973 ? disulf ? disulf2 I SG CYS 75 I CYS 75 1_555 I SG CYS 78 I CYS 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.801 ? disulf ? disulf3 I SG CYS 75 I CYS 75 1_555 I SG CYS 103 I CYS 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.914 ? disulf ? disulf4 I SG CYS 103 I CYS 103 1_555 I SG CYS 106 I CYS 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.986 ? disulf ? disulf5 J SG CYS 10 J CYS 10 1_555 J SG CYS 46 J CYS 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.83 ? disulf ? disulf6 L SG CYS 34 L CYS 34 1_555 L SG CYS 51 L CYS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.98 ? metalc ? metalc1 A SG CYS 67 A CYS 67 1_555 N ZN ZN . A ZN 1735 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? metalc ? metalc2 A SG CYS 70 A CYS 70 1_555 N ZN ZN . A ZN 1735 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc3 A NE2 HIS 80 A HIS 80 1_555 N ZN ZN . A ZN 1735 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc4 A SG CYS 110 A CYS 110 1_555 M ZN ZN . A ZN 1734 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc5 A SG CYS 167 A CYS 167 1_555 M ZN ZN . A ZN 1734 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? metalc ? metalc6 B SG CYS 1163 B CYS 1163 1_555 O ZN ZN . B ZN 1307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.724 ? metalc ? metalc7 B SG CYS 1166 B CYS 1166 1_555 O ZN ZN . B ZN 1307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.964 ? metalc ? metalc8 B SG CYS 1182 B CYS 1182 1_555 O ZN ZN . B ZN 1307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? metalc ? metalc9 B SG CYS 1185 B CYS 1185 1_555 O ZN ZN . B ZN 1307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.934 ? metalc ? metalc10 C SG CYS 86 C CYS 86 1_555 P ZN ZN . C ZN 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.918 ? metalc ? metalc11 C SG CYS 88 C CYS 88 1_555 P ZN ZN . C ZN 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc12 C SG CYS 92 C CYS 92 1_555 P ZN ZN . C ZN 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? metalc ? metalc13 C SG CYS 95 C CYS 95 1_555 P ZN ZN . C ZN 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc14 I SG CYS 7 I CYS 7 1_555 Q ZN ZN . I ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.801 ? metalc ? metalc15 I SG CYS 10 I CYS 10 1_555 Q ZN ZN . I ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.908 ? metalc ? metalc16 I SG CYS 29 I CYS 29 1_555 Q ZN ZN . I ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.912 ? metalc ? metalc17 I SG CYS 32 I CYS 32 1_555 Q ZN ZN . I ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.893 ? metalc ? metalc18 I SG CYS 75 I CYS 75 1_555 R ZN ZN . I ZN 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.754 ? metalc ? metalc19 I SG CYS 78 I CYS 78 1_555 R ZN ZN . I ZN 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc20 I SG CYS 103 I CYS 103 1_555 R ZN ZN . I ZN 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? metalc ? metalc21 I SG CYS 106 I CYS 106 1_555 R ZN ZN . I ZN 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.89 ? metalc ? metalc22 J SG CYS 7 J CYS 7 1_555 S ZN ZN . J ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.523 ? metalc ? metalc23 J SG CYS 10 J CYS 10 1_555 S ZN ZN . J ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc24 J SG CYS 45 J CYS 45 1_555 S ZN ZN . J ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.925 ? metalc ? metalc25 J SG CYS 46 J CYS 46 1_555 S ZN ZN . J ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.814 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1NIK _atom_sites.fract_transf_matrix[1][1] 0.004462 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.002535 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003517 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 13 ZN A 1 1734 1506 ZN ZN . N 13 ZN A 1 1735 1508 ZN ZN . O 13 ZN B 1 1307 1307 ZN ZN . P 13 ZN C 1 319 302 ZN ZN . Q 13 ZN I 1 203 203 ZN ZN . R 13 ZN I 1 204 204 ZN ZN . S 13 ZN J 1 101 101 ZN ZN . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id R _atom_site.label_entity_id 13 _atom_site.Cartn_x 33.34 _atom_site.Cartn_y -96.072 _atom_site.Cartn_z 33.277 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 172.55 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 204 _atom_site.auth_asym_id I _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #