data_1NJS # _model_server_result.job_id a_SQQPMYj5BscgS4nXj3nQ _model_server_result.datetime_utc '2024-12-21 14:36:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1njs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":522}' # _entry.id 1NJS # _exptl.entry_id 1NJS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1NJS _cell.length_a 126.235 _cell.length_b 126.235 _cell.length_c 94.419 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NJS _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,H 1 1 B,F,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 F N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 329 n n P O2 PO4 sing 330 n n P O3 PO4 sing 331 n n P O4 PO4 sing 332 n n # _atom_sites.entry_id 1NJS _atom_sites.fract_transf_matrix[1][1] 0.007922 _atom_sites.fract_transf_matrix[1][2] 0.004574 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009147 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010591 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 521 221 PO4 PO4 . D 2 PO4 A 1 522 222 PO4 PO4 . E 3 KEU A 1 510 210 KEU KET . F 2 PO4 B 1 621 221 PO4 PO4 . G 3 KEU B 1 610 210 KEU KET . H 4 HOH A 1 523 1 HOH HOH . H 4 HOH A 2 524 2 HOH HOH . H 4 HOH A 3 525 3 HOH HOH . H 4 HOH A 4 526 4 HOH HOH . H 4 HOH A 5 527 8 HOH HOH . H 4 HOH A 6 528 10 HOH HOH . H 4 HOH A 7 529 12 HOH HOH . H 4 HOH A 8 530 13 HOH HOH . H 4 HOH A 9 531 15 HOH HOH . H 4 HOH A 10 532 16 HOH HOH . H 4 HOH A 11 533 18 HOH HOH . H 4 HOH A 12 534 19 HOH HOH . H 4 HOH A 13 535 20 HOH HOH . H 4 HOH A 14 536 21 HOH HOH . H 4 HOH A 15 537 22 HOH HOH . H 4 HOH A 16 538 24 HOH HOH . H 4 HOH A 17 539 25 HOH HOH . H 4 HOH A 18 540 28 HOH HOH . H 4 HOH A 19 541 30 HOH HOH . H 4 HOH A 20 542 32 HOH HOH . H 4 HOH A 21 543 33 HOH HOH . H 4 HOH A 22 544 34 HOH HOH . H 4 HOH A 23 545 35 HOH HOH . H 4 HOH A 24 546 37 HOH HOH . H 4 HOH A 25 547 39 HOH HOH . H 4 HOH A 26 548 41 HOH HOH . H 4 HOH A 27 549 43 HOH HOH . H 4 HOH A 28 550 45 HOH HOH . H 4 HOH A 29 551 46 HOH HOH . H 4 HOH A 30 552 47 HOH HOH . H 4 HOH A 31 553 48 HOH HOH . H 4 HOH A 32 554 50 HOH HOH . H 4 HOH A 33 555 51 HOH HOH . H 4 HOH A 34 556 57 HOH HOH . H 4 HOH A 35 557 59 HOH HOH . H 4 HOH A 36 558 60 HOH HOH . H 4 HOH A 37 559 61 HOH HOH . H 4 HOH A 38 560 62 HOH HOH . H 4 HOH A 39 561 63 HOH HOH . H 4 HOH A 40 562 67 HOH HOH . H 4 HOH A 41 563 70 HOH HOH . H 4 HOH A 42 564 73 HOH HOH . H 4 HOH A 43 565 74 HOH HOH . H 4 HOH A 44 566 75 HOH HOH . H 4 HOH A 45 567 76 HOH HOH . H 4 HOH A 46 568 77 HOH HOH . H 4 HOH A 47 569 78 HOH HOH . H 4 HOH A 48 570 80 HOH HOH . H 4 HOH A 49 571 84 HOH HOH . H 4 HOH A 50 572 85 HOH HOH . H 4 HOH A 51 573 87 HOH HOH . H 4 HOH A 52 574 88 HOH HOH . H 4 HOH A 53 575 92 HOH HOH . H 4 HOH A 54 576 93 HOH HOH . H 4 HOH A 55 577 94 HOH HOH . H 4 HOH A 56 578 95 HOH HOH . H 4 HOH A 57 579 100 HOH HOH . H 4 HOH A 58 580 101 HOH HOH . H 4 HOH A 59 581 104 HOH HOH . H 4 HOH A 60 582 105 HOH HOH . H 4 HOH A 61 583 106 HOH HOH . H 4 HOH A 62 584 107 HOH HOH . H 4 HOH A 63 585 109 HOH HOH . H 4 HOH A 64 586 110 HOH HOH . H 4 HOH A 65 587 111 HOH HOH . H 4 HOH A 66 588 112 HOH HOH . H 4 HOH A 67 589 114 HOH HOH . H 4 HOH A 68 590 115 HOH HOH . H 4 HOH A 69 591 116 HOH HOH . H 4 HOH A 70 592 120 HOH HOH . H 4 HOH A 71 593 121 HOH HOH . H 4 HOH A 72 594 123 HOH HOH . H 4 HOH A 73 595 126 HOH HOH . H 4 HOH A 74 596 127 HOH HOH . H 4 HOH A 75 597 129 HOH HOH . H 4 HOH A 76 598 132 HOH HOH . H 4 HOH A 77 599 133 HOH HOH . H 4 HOH A 78 600 134 HOH HOH . H 4 HOH A 79 601 135 HOH HOH . H 4 HOH A 80 602 136 HOH HOH . H 4 HOH A 81 603 140 HOH HOH . H 4 HOH A 82 604 141 HOH HOH . H 4 HOH A 83 605 142 HOH HOH . H 4 HOH A 84 606 143 HOH HOH . H 4 HOH A 85 607 144 HOH HOH . H 4 HOH A 86 608 145 HOH HOH . H 4 HOH A 87 609 147 HOH HOH . H 4 HOH A 88 610 148 HOH HOH . H 4 HOH A 89 611 149 HOH HOH . H 4 HOH A 90 612 150 HOH HOH . H 4 HOH A 91 613 151 HOH HOH . H 4 HOH A 92 614 152 HOH HOH . H 4 HOH A 93 615 153 HOH HOH . H 4 HOH A 94 616 154 HOH HOH . H 4 HOH A 95 617 157 HOH HOH . H 4 HOH A 96 618 161 HOH HOH . H 4 HOH A 97 619 162 HOH HOH . H 4 HOH A 98 620 164 HOH HOH . H 4 HOH A 99 621 167 HOH HOH . H 4 HOH A 100 622 170 HOH HOH . H 4 HOH A 101 623 172 HOH HOH . H 4 HOH A 102 624 173 HOH HOH . H 4 HOH A 103 625 174 HOH HOH . H 4 HOH A 104 626 175 HOH HOH . H 4 HOH A 105 627 176 HOH HOH . H 4 HOH A 106 628 177 HOH HOH . H 4 HOH A 107 629 178 HOH HOH . H 4 HOH A 108 630 179 HOH HOH . H 4 HOH A 109 631 180 HOH HOH . H 4 HOH A 110 632 185 HOH HOH . H 4 HOH A 111 633 193 HOH HOH . H 4 HOH A 112 634 194 HOH HOH . H 4 HOH A 113 635 195 HOH HOH . H 4 HOH A 114 636 197 HOH HOH . H 4 HOH A 115 637 200 HOH HOH . H 4 HOH A 116 638 204 HOH HOH . H 4 HOH A 117 639 205 HOH HOH . H 4 HOH A 118 640 206 HOH HOH . H 4 HOH A 119 641 207 HOH HOH . H 4 HOH A 120 642 208 HOH HOH . H 4 HOH A 121 643 209 HOH HOH . H 4 HOH A 122 644 210 HOH HOH . H 4 HOH A 123 645 211 HOH HOH . H 4 HOH A 124 646 212 HOH HOH . H 4 HOH A 125 647 213 HOH HOH . H 4 HOH A 126 648 214 HOH HOH . H 4 HOH A 127 649 215 HOH HOH . H 4 HOH A 128 650 216 HOH HOH . H 4 HOH A 129 651 217 HOH HOH . H 4 HOH A 130 652 218 HOH HOH . H 4 HOH A 131 653 219 HOH HOH . H 4 HOH A 132 654 220 HOH HOH . H 4 HOH A 133 655 222 HOH HOH . H 4 HOH A 134 656 223 HOH HOH . H 4 HOH A 135 657 228 HOH HOH . H 4 HOH A 136 658 229 HOH HOH . H 4 HOH A 137 659 230 HOH HOH . H 4 HOH A 138 660 231 HOH HOH . H 4 HOH A 139 661 232 HOH HOH . H 4 HOH A 140 662 234 HOH HOH . H 4 HOH A 141 663 235 HOH HOH . H 4 HOH A 142 664 236 HOH HOH . H 4 HOH A 143 665 237 HOH HOH . H 4 HOH A 144 666 239 HOH HOH . H 4 HOH A 145 667 245 HOH HOH . H 4 HOH A 146 668 247 HOH HOH . H 4 HOH A 147 669 248 HOH HOH . I 4 HOH B 1 622 5 HOH HOH . I 4 HOH B 2 623 6 HOH HOH . I 4 HOH B 3 624 7 HOH HOH . I 4 HOH B 4 625 9 HOH HOH . I 4 HOH B 5 626 11 HOH HOH . I 4 HOH B 6 627 14 HOH HOH . I 4 HOH B 7 628 17 HOH HOH . I 4 HOH B 8 629 23 HOH HOH . I 4 HOH B 9 630 26 HOH HOH . I 4 HOH B 10 631 27 HOH HOH . I 4 HOH B 11 632 29 HOH HOH . I 4 HOH B 12 633 31 HOH HOH . I 4 HOH B 13 634 36 HOH HOH . I 4 HOH B 14 635 38 HOH HOH . I 4 HOH B 15 636 40 HOH HOH . I 4 HOH B 16 637 42 HOH HOH . I 4 HOH B 17 638 44 HOH HOH . I 4 HOH B 18 639 49 HOH HOH . I 4 HOH B 19 640 52 HOH HOH . I 4 HOH B 20 641 53 HOH HOH . I 4 HOH B 21 642 54 HOH HOH . I 4 HOH B 22 643 55 HOH HOH . I 4 HOH B 23 644 56 HOH HOH . I 4 HOH B 24 645 58 HOH HOH . I 4 HOH B 25 646 64 HOH HOH . I 4 HOH B 26 647 65 HOH HOH . I 4 HOH B 27 648 66 HOH HOH . I 4 HOH B 28 649 68 HOH HOH . I 4 HOH B 29 650 69 HOH HOH . I 4 HOH B 30 651 71 HOH HOH . I 4 HOH B 31 652 72 HOH HOH . I 4 HOH B 32 653 79 HOH HOH . I 4 HOH B 33 654 81 HOH HOH . I 4 HOH B 34 655 82 HOH HOH . I 4 HOH B 35 656 83 HOH HOH . I 4 HOH B 36 657 86 HOH HOH . I 4 HOH B 37 658 89 HOH HOH . I 4 HOH B 38 659 90 HOH HOH . I 4 HOH B 39 660 91 HOH HOH . I 4 HOH B 40 661 96 HOH HOH . I 4 HOH B 41 662 97 HOH HOH . I 4 HOH B 42 663 98 HOH HOH . I 4 HOH B 43 664 99 HOH HOH . I 4 HOH B 44 665 102 HOH HOH . I 4 HOH B 45 666 103 HOH HOH . I 4 HOH B 46 667 108 HOH HOH . I 4 HOH B 47 668 113 HOH HOH . I 4 HOH B 48 669 117 HOH HOH . I 4 HOH B 49 670 118 HOH HOH . I 4 HOH B 50 671 119 HOH HOH . I 4 HOH B 51 672 122 HOH HOH . I 4 HOH B 52 673 124 HOH HOH . I 4 HOH B 53 674 125 HOH HOH . I 4 HOH B 54 675 128 HOH HOH . I 4 HOH B 55 676 130 HOH HOH . I 4 HOH B 56 677 131 HOH HOH . I 4 HOH B 57 678 137 HOH HOH . I 4 HOH B 58 679 138 HOH HOH . I 4 HOH B 59 680 139 HOH HOH . I 4 HOH B 60 681 146 HOH HOH . I 4 HOH B 61 682 155 HOH HOH . I 4 HOH B 62 683 156 HOH HOH . I 4 HOH B 63 684 158 HOH HOH . I 4 HOH B 64 685 159 HOH HOH . I 4 HOH B 65 686 160 HOH HOH . I 4 HOH B 66 687 163 HOH HOH . I 4 HOH B 67 688 165 HOH HOH . I 4 HOH B 68 689 166 HOH HOH . I 4 HOH B 69 690 168 HOH HOH . I 4 HOH B 70 691 169 HOH HOH . I 4 HOH B 71 692 171 HOH HOH . I 4 HOH B 72 693 181 HOH HOH . I 4 HOH B 73 694 182 HOH HOH . I 4 HOH B 74 695 183 HOH HOH . I 4 HOH B 75 696 184 HOH HOH . I 4 HOH B 76 697 186 HOH HOH . I 4 HOH B 77 698 187 HOH HOH . I 4 HOH B 78 699 188 HOH HOH . I 4 HOH B 79 700 189 HOH HOH . I 4 HOH B 80 701 190 HOH HOH . I 4 HOH B 81 702 191 HOH HOH . I 4 HOH B 82 703 192 HOH HOH . I 4 HOH B 83 704 196 HOH HOH . I 4 HOH B 84 705 198 HOH HOH . I 4 HOH B 85 706 199 HOH HOH . I 4 HOH B 86 707 201 HOH HOH . I 4 HOH B 87 708 202 HOH HOH . I 4 HOH B 88 709 203 HOH HOH . I 4 HOH B 89 710 221 HOH HOH . I 4 HOH B 90 711 224 HOH HOH . I 4 HOH B 91 712 225 HOH HOH . I 4 HOH B 92 713 226 HOH HOH . I 4 HOH B 93 714 227 HOH HOH . I 4 HOH B 94 715 233 HOH HOH . I 4 HOH B 95 716 238 HOH HOH . I 4 HOH B 96 717 240 HOH HOH . I 4 HOH B 97 718 241 HOH HOH . I 4 HOH B 98 719 242 HOH HOH . I 4 HOH B 99 720 243 HOH HOH . I 4 HOH B 100 721 244 HOH HOH . I 4 HOH B 101 722 246 HOH HOH . I 4 HOH B 102 723 249 HOH HOH . I 4 HOH B 103 724 250 HOH HOH . I 4 HOH B 104 725 251 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . D 2 50.848 11.702 25.969 1 50.75 ? P PO4 522 A 1 HETATM 2 O O1 PO4 . . . D 2 49.34 11.685 26.15 1 50.28 ? O1 PO4 522 A 1 HETATM 3 O O2 PO4 . . . D 2 51.294 10.351 25.452 1 49.71 ? O2 PO4 522 A 1 HETATM 4 O O3 PO4 . . . D 2 51.516 11.985 27.312 1 46.9 ? O3 PO4 522 A 1 HETATM 5 O O4 PO4 . . . D 2 51.228 12.747 24.935 1 44.88 ? O4 PO4 522 A 1 # _model_server_stats.io_time_ms 73 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #