data_1NLJ # _model_server_result.job_id NH3SpBeGbdINuzkkdcaJ9A _model_server_result.datetime_utc '2024-12-21 13:07:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1nlj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":300}' # _entry.id 1NLJ # _exptl.entry_id 1NLJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 526.605 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BENZOFURAN-2-CARBOXYLIC ACID {(S)-3-METHYL-1-[3-OXO-1-(PYRIDIN-2-YLSULFONYL)AZEPAN-4-YLCARBAMOYL]BUTYL}AMIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1NLJ _cell.length_a 100.96 _cell.length_b 100.96 _cell.length_c 53.694 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NLJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C 1 1 B,D 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 22 1_555 A SG CYS 63 A CYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 A SG CYS 56 A CYS 56 1_555 A SG CYS 96 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf3 A SG CYS 155 A CYS 155 1_555 A SG CYS 204 A CYS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 B SG CYS 22 B CYS 22 1_555 B SG CYS 63 B CYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf5 B SG CYS 56 B CYS 56 1_555 B SG CYS 96 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf6 B SG CYS 155 B CYS 155 1_555 B SG CYS 204 B CYS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? covale ? covale1 A SG CYS 25 A CYS 25 1_555 C C07 2CA . A 2CA 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.791 ? covale ? covale2 B SG CYS 25 B CYS 25 1_555 D C07 2CA . B 2CA 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.803 ? # _chem_comp.formula 'C26 H30 N4 O6 S' _chem_comp.formula_weight 526.605 _chem_comp.id 2CA _chem_comp.mon_nstd_flag . _chem_comp.name 'BENZOFURAN-2-CARBOXYLIC ACID {(S)-3-METHYL-1-[3-OXO-1-(PYRIDIN-2-YLSULFONYL)AZEPAN-4-YLCARBAMOYL]BUTYL}AMIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S1 O1 2CA doub 1 n n S1 O2 2CA doub 2 n n S1 C23 2CA sing 3 n n S1 N05 2CA sing 4 n n O4 C8 2CA doub 5 n n O5 C14 2CA doub 6 n n O6 C15 2CA sing 7 n y O6 C21 2CA sing 8 n y N2 C8 2CA sing 9 n n N2 C01 2CA sing 10 n n N2 HN2 2CA sing 11 n n N3 C9 2CA sing 12 n n N3 C14 2CA sing 13 n n N3 HN3 2CA sing 14 n n N4 C23 2CA doub 15 n y N4 C27 2CA sing 16 n y C8 C9 2CA sing 17 n n C9 C10 2CA sing 18 n n C9 HC9 2CA sing 19 n n C10 C11 2CA sing 20 n n C10 H101 2CA sing 21 n n C10 H102 2CA sing 22 n n C11 C12 2CA sing 23 n n C11 C13 2CA sing 24 n n C11 H11 2CA sing 25 n n C12 H121 2CA sing 26 n n C12 H122 2CA sing 27 n n C12 H123 2CA sing 28 n n C13 H131 2CA sing 29 n n C13 H132 2CA sing 30 n n C13 H133 2CA sing 31 n n C14 C15 2CA sing 32 n n C15 C16 2CA doub 33 n y C16 C22 2CA sing 34 n y C16 H16 2CA sing 35 n n C17 C18 2CA doub 36 n y C17 C22 2CA sing 37 n y C17 H17 2CA sing 38 n n C18 C19 2CA sing 39 n y C18 H18 2CA sing 40 n n C19 C20 2CA doub 41 n y C19 H19 2CA sing 42 n n C20 C21 2CA sing 43 n y C20 H20 2CA sing 44 n n C21 C22 2CA doub 45 n y C23 C24 2CA sing 46 n y C24 C25 2CA doub 47 n y C24 H24 2CA sing 48 n n C25 C26 2CA sing 49 n y C25 H25 2CA sing 50 n n C26 C27 2CA doub 51 n y C26 H26 2CA sing 52 n n C27 H27 2CA sing 53 n n C01 C02 2CA sing 54 n n C01 C07 2CA sing 55 n n C01 H01 2CA sing 56 n n C02 C03 2CA sing 57 n n C02 H021 2CA sing 58 n n C02 H022 2CA sing 59 n n C03 C04 2CA sing 60 n n C03 H031 2CA sing 61 n n C03 H032 2CA sing 62 n n C04 N05 2CA sing 63 n n C04 H041 2CA sing 64 n n C04 H042 2CA sing 65 n n N05 C06 2CA sing 66 n n C06 C07 2CA sing 67 n n C06 H061 2CA sing 68 n n C06 H062 2CA sing 69 n n O08 C07 2CA doub 70 n n # _atom_sites.entry_id 1NLJ _atom_sites.fract_transf_matrix[1][1] 0.009905 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009905 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018624 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 2CA A 1 300 300 2CA INH . D 2 2CA B 1 300 300 2CA INH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S1 2CA . . . C 2 29.63 -32.915 -2.018 1 50.13 ? S1 2CA 300 A 1 HETATM 2 O O1 2CA . . . C 2 28.817 -33.609 -2.991 1 46.59 ? O1 2CA 300 A 1 HETATM 3 O O2 2CA . . . C 2 29.009 -32.654 -0.744 1 48.47 ? O2 2CA 300 A 1 HETATM 4 O O4 2CA . . . C 2 34.961 -38.091 -2.046 1 29.25 ? O4 2CA 300 A 1 HETATM 5 O O5 2CA . . . C 2 37.443 -36.114 -0.968 1 30.47 ? O5 2CA 300 A 1 HETATM 6 O O6 2CA . . . C 2 39.013 -38.021 0.177 1 33.37 ? O6 2CA 300 A 1 HETATM 7 N N2 2CA . . . C 2 34.185 -36.014 -2.472 1 33.05 ? N2 2CA 300 A 1 HETATM 8 N N3 2CA . . . C 2 37.419 -37.268 -2.983 1 32.9 ? N3 2CA 300 A 1 HETATM 9 N N4 2CA . . . C 2 30.74 -31.451 -4.011 1 52.53 ? N4 2CA 300 A 1 HETATM 10 C C8 2CA . . . C 2 35.062 -36.993 -2.644 1 33.95 ? C8 2CA 300 A 1 HETATM 11 C C9 2CA . . . C 2 36.238 -36.668 -3.623 1 31.02 ? C9 2CA 300 A 1 HETATM 12 C C10 2CA . . . C 2 35.939 -37.345 -4.976 1 29.49 ? C10 2CA 300 A 1 HETATM 13 C C11 2CA . . . C 2 36.59 -36.863 -6.311 1 29.79 ? C11 2CA 300 A 1 HETATM 14 C C12 2CA . . . C 2 37.316 -37.999 -6.981 1 29.84 ? C12 2CA 300 A 1 HETATM 15 C C13 2CA . . . C 2 37.638 -35.803 -6.082 1 23.82 ? C13 2CA 300 A 1 HETATM 16 C C14 2CA . . . C 2 37.826 -37.048 -1.69 1 30.81 ? C14 2CA 300 A 1 HETATM 17 C C15 2CA . . . C 2 38.785 -38.04 -1.18 1 28.65 ? C15 2CA 300 A 1 HETATM 18 C C16 2CA . . . C 2 39.508 -38.973 -1.796 1 28.61 ? C16 2CA 300 A 1 HETATM 19 C C17 2CA . . . C 2 40.93 -40.93 -0.693 1 26.54 ? C17 2CA 300 A 1 HETATM 20 C C18 2CA . . . C 2 41.438 -41.35 0.573 1 26.78 ? C18 2CA 300 A 1 HETATM 21 C C19 2CA . . . C 2 41.142 -40.611 1.767 1 29.76 ? C19 2CA 300 A 1 HETATM 22 C C20 2CA . . . C 2 40.258 -39.504 1.761 1 25.61 ? C20 2CA 300 A 1 HETATM 23 C C21 2CA . . . C 2 39.794 -39.082 0.442 1 29.92 ? C21 2CA 300 A 1 HETATM 24 C C22 2CA . . . C 2 40.129 -39.752 -0.752 1 26.01 ? C22 2CA 300 A 1 HETATM 25 C C23 2CA . . . C 2 30.236 -31.339 -2.746 1 50.4 ? C23 2CA 300 A 1 HETATM 26 C C24 2CA . . . C 2 30.222 -30.09 -2.031 1 51.82 ? C24 2CA 300 A 1 HETATM 27 C C25 2CA . . . C 2 31.053 -29.039 -2.531 1 52.37 ? C25 2CA 300 A 1 HETATM 28 C C26 2CA . . . C 2 31.597 -29.132 -3.839 1 52.11 ? C26 2CA 300 A 1 HETATM 29 C C27 2CA . . . C 2 31.427 -30.347 -4.549 1 52.33 ? C27 2CA 300 A 1 HETATM 30 C C01 2CA . . . C 2 32.965 -36.261 -1.507 1 38.98 ? C01 2CA 300 A 1 HETATM 31 C C02 2CA . . . C 2 33.095 -35.375 -0.208 1 39.44 ? C02 2CA 300 A 1 HETATM 32 C C03 2CA . . . C 2 33.227 -33.85 -0.402 1 44.59 ? C03 2CA 300 A 1 HETATM 33 C C04 2CA . . . C 2 32.029 -33.097 -1.034 1 44 ? C04 2CA 300 A 1 HETATM 34 N N05 2CA . . . C 2 30.916 -33.859 -1.696 1 45.79 ? N05 2CA 300 A 1 HETATM 35 C C06 2CA . . . C 2 31.336 -34.68 -2.871 1 41.51 ? C06 2CA 300 A 1 HETATM 36 O O08 2CA . . . C 2 30.564 -36.596 -1.588 1 40.89 ? O08 2CA 300 A 1 HETATM 37 C C07 2CA . . . C 2 31.663 -36.107 -2.35 1 38.59 ? C07 2CA 300 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 37 #