data_1NLN # _model_server_result.job_id rRizJvoD-kIAoj64hOC4TA _model_server_result.datetime_utc '2024-12-18 10:51:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1nln # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":600}' # _entry.id 1NLN # _exptl.entry_id 1NLN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 60.052 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1NLN _cell.length_a 111.5 _cell.length_b 111.5 _cell.length_c 50.9 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NLN _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 104 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 104 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 10 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 309 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.107 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H4 O2' _chem_comp.formula_weight 60.052 _chem_comp.id ACY _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACY doub 1 n n C OXT ACY sing 2 n n C CH3 ACY sing 3 n n OXT HXT ACY sing 4 n n CH3 H1 ACY sing 5 n n CH3 H2 ACY sing 6 n n CH3 H3 ACY sing 7 n n # _atom_sites.entry_id 1NLN _atom_sites.fract_transf_matrix[1][1] 0.008969 _atom_sites.fract_transf_matrix[1][2] 0.005178 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010356 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019646 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ACY A 1 600 600 ACY ACY . D 4 HOH A 1 1000 1000 HOH HOH . D 4 HOH A 2 1002 1002 HOH HOH . D 4 HOH A 3 1003 1003 HOH HOH . D 4 HOH A 4 1004 1004 HOH HOH . D 4 HOH A 5 1005 1005 HOH HOH . D 4 HOH A 6 1006 1006 HOH HOH . D 4 HOH A 7 1007 1007 HOH HOH . D 4 HOH A 8 1008 1008 HOH HOH . D 4 HOH A 9 1009 1009 HOH HOH . D 4 HOH A 10 1010 1010 HOH HOH . D 4 HOH A 11 1011 1011 HOH HOH . D 4 HOH A 12 1012 1012 HOH HOH . D 4 HOH A 13 1013 1013 HOH HOH . D 4 HOH A 14 1014 1014 HOH HOH . D 4 HOH A 15 1015 1015 HOH HOH . D 4 HOH A 16 1016 1016 HOH HOH . D 4 HOH A 17 1017 1017 HOH HOH . D 4 HOH A 18 1018 1018 HOH HOH . D 4 HOH A 19 1019 1019 HOH HOH . D 4 HOH A 20 1020 1020 HOH HOH . D 4 HOH A 21 1021 1021 HOH HOH . D 4 HOH A 22 1022 1022 HOH HOH . D 4 HOH A 23 1023 1023 HOH HOH . D 4 HOH A 24 1024 1024 HOH HOH . D 4 HOH A 25 1025 1025 HOH HOH . D 4 HOH A 26 1026 1026 HOH HOH . D 4 HOH A 27 1027 1027 HOH HOH . D 4 HOH A 28 1028 1028 HOH HOH . D 4 HOH A 29 1029 1029 HOH HOH . D 4 HOH A 30 1030 1030 HOH HOH . D 4 HOH A 31 1031 1031 HOH HOH . D 4 HOH A 32 1032 1032 HOH HOH . D 4 HOH A 33 1033 1033 HOH HOH . D 4 HOH A 34 1034 1034 HOH HOH . D 4 HOH A 35 1035 1035 HOH HOH . D 4 HOH A 36 1036 1036 HOH HOH . D 4 HOH A 37 1037 1037 HOH HOH . D 4 HOH A 38 1038 1038 HOH HOH . D 4 HOH A 39 1039 1039 HOH HOH . D 4 HOH A 40 1040 1040 HOH HOH . D 4 HOH A 41 1041 1041 HOH HOH . D 4 HOH A 42 1043 1043 HOH HOH . D 4 HOH A 43 1044 1044 HOH HOH . D 4 HOH A 44 1045 1045 HOH HOH . D 4 HOH A 45 1046 1046 HOH HOH . D 4 HOH A 46 1048 1048 HOH HOH . D 4 HOH A 47 1049 1049 HOH HOH . D 4 HOH A 48 1050 1050 HOH HOH . D 4 HOH A 49 1051 1051 HOH HOH . D 4 HOH A 50 1052 1052 HOH HOH . D 4 HOH A 51 1054 1054 HOH HOH . D 4 HOH A 52 1055 1055 HOH HOH . D 4 HOH A 53 1056 1056 HOH HOH . D 4 HOH A 54 1057 1057 HOH HOH . D 4 HOH A 55 1058 1058 HOH HOH . D 4 HOH A 56 1059 1059 HOH HOH . D 4 HOH A 57 1060 1060 HOH HOH . D 4 HOH A 58 1061 1061 HOH HOH . D 4 HOH A 59 1062 1062 HOH HOH . D 4 HOH A 60 1063 1063 HOH HOH . D 4 HOH A 61 1064 1064 HOH HOH . D 4 HOH A 62 1065 1065 HOH HOH . D 4 HOH A 63 1066 1066 HOH HOH . D 4 HOH A 64 1067 1067 HOH HOH . D 4 HOH A 65 1068 1068 HOH HOH . D 4 HOH A 66 1069 1069 HOH HOH . D 4 HOH A 67 1070 1070 HOH HOH . D 4 HOH A 68 1071 1071 HOH HOH . D 4 HOH A 69 1073 1073 HOH HOH . D 4 HOH A 70 1074 1074 HOH HOH . D 4 HOH A 71 1075 1075 HOH HOH . D 4 HOH A 72 1076 1076 HOH HOH . D 4 HOH A 73 1077 1077 HOH HOH . D 4 HOH A 74 1078 1078 HOH HOH . D 4 HOH A 75 1079 1079 HOH HOH . D 4 HOH A 76 1080 1080 HOH HOH . D 4 HOH A 77 1081 1081 HOH HOH . D 4 HOH A 78 1082 1082 HOH HOH . D 4 HOH A 79 1083 1083 HOH HOH . D 4 HOH A 80 1084 1084 HOH HOH . D 4 HOH A 81 1085 1085 HOH HOH . D 4 HOH A 82 1086 1086 HOH HOH . D 4 HOH A 83 1087 1087 HOH HOH . D 4 HOH A 84 1088 1088 HOH HOH . D 4 HOH A 85 1089 1089 HOH HOH . D 4 HOH A 86 1090 1090 HOH HOH . D 4 HOH A 87 1091 1091 HOH HOH . D 4 HOH A 88 1092 1092 HOH HOH . D 4 HOH A 89 1093 1093 HOH HOH . D 4 HOH A 90 1094 1094 HOH HOH . D 4 HOH A 91 1096 1096 HOH HOH . D 4 HOH A 92 1097 1097 HOH HOH . D 4 HOH A 93 1098 1098 HOH HOH . D 4 HOH A 94 1099 1099 HOH HOH . D 4 HOH A 95 1100 1100 HOH HOH . D 4 HOH A 96 1101 1101 HOH HOH . D 4 HOH A 97 1102 1102 HOH HOH . D 4 HOH A 98 1103 1103 HOH HOH . D 4 HOH A 99 1104 1104 HOH HOH . D 4 HOH A 100 1106 1106 HOH HOH . D 4 HOH A 101 1107 1107 HOH HOH . D 4 HOH A 102 1108 1108 HOH HOH . D 4 HOH A 103 1109 1109 HOH HOH . D 4 HOH A 104 1110 1110 HOH HOH . D 4 HOH A 105 1111 1111 HOH HOH . D 4 HOH A 106 1112 1112 HOH HOH . D 4 HOH A 107 1113 1113 HOH HOH . D 4 HOH A 108 1114 1114 HOH HOH . D 4 HOH A 109 1115 1115 HOH HOH . D 4 HOH A 110 1116 1116 HOH HOH . D 4 HOH A 111 1117 1117 HOH HOH . D 4 HOH A 112 1118 1118 HOH HOH . D 4 HOH A 113 1119 1119 HOH HOH . D 4 HOH A 114 1120 1120 HOH HOH . D 4 HOH A 115 1121 1121 HOH HOH . D 4 HOH A 116 1122 1122 HOH HOH . D 4 HOH A 117 1123 1123 HOH HOH . D 4 HOH A 118 1124 1124 HOH HOH . D 4 HOH A 119 1125 1125 HOH HOH . D 4 HOH A 120 1126 1126 HOH HOH . D 4 HOH A 121 1127 1127 HOH HOH . D 4 HOH A 122 1128 1128 HOH HOH . D 4 HOH A 123 1129 1129 HOH HOH . D 4 HOH A 124 1130 1130 HOH HOH . D 4 HOH A 125 1132 1132 HOH HOH . D 4 HOH A 126 1133 1133 HOH HOH . D 4 HOH A 127 1134 1134 HOH HOH . D 4 HOH A 128 1136 1136 HOH HOH . D 4 HOH A 129 1137 1137 HOH HOH . D 4 HOH A 130 1138 1138 HOH HOH . D 4 HOH A 131 1139 1139 HOH HOH . D 4 HOH A 132 1140 1140 HOH HOH . D 4 HOH A 133 1141 1141 HOH HOH . D 4 HOH A 134 1142 1142 HOH HOH . D 4 HOH A 135 1143 1143 HOH HOH . D 4 HOH A 136 1144 1144 HOH HOH . D 4 HOH A 137 1145 1145 HOH HOH . D 4 HOH A 138 1146 1146 HOH HOH . D 4 HOH A 139 1147 1147 HOH HOH . D 4 HOH A 140 1148 1148 HOH HOH . D 4 HOH A 141 1149 1149 HOH HOH . D 4 HOH A 142 1150 1150 HOH HOH . D 4 HOH A 143 1151 1151 HOH HOH . D 4 HOH A 144 1152 1152 HOH HOH . D 4 HOH A 145 1153 1153 HOH HOH . D 4 HOH A 146 1154 1154 HOH HOH . D 4 HOH A 147 1155 1155 HOH HOH . D 4 HOH A 148 1156 1156 HOH HOH . D 4 HOH A 149 1157 1157 HOH HOH . D 4 HOH A 150 1158 1158 HOH HOH . D 4 HOH A 151 1160 1160 HOH HOH . D 4 HOH A 152 1161 1161 HOH HOH . D 4 HOH A 153 1162 1162 HOH HOH . D 4 HOH A 154 1165 1165 HOH HOH . D 4 HOH A 155 1166 1166 HOH HOH . D 4 HOH A 156 1167 1167 HOH HOH . D 4 HOH A 157 1169 1169 HOH HOH . D 4 HOH A 158 1170 1170 HOH HOH . D 4 HOH A 159 1171 1171 HOH HOH . D 4 HOH A 160 1172 1172 HOH HOH . D 4 HOH A 161 1173 1173 HOH HOH . D 4 HOH A 162 1174 1174 HOH HOH . D 4 HOH A 163 1175 1175 HOH HOH . D 4 HOH A 164 1176 1176 HOH HOH . D 4 HOH A 165 1177 1177 HOH HOH . D 4 HOH A 166 1178 1178 HOH HOH . D 4 HOH A 167 1179 1179 HOH HOH . D 4 HOH A 168 1181 1181 HOH HOH . D 4 HOH A 169 1182 1182 HOH HOH . D 4 HOH A 170 1183 1183 HOH HOH . D 4 HOH A 171 1184 1184 HOH HOH . D 4 HOH A 172 1185 1185 HOH HOH . D 4 HOH A 173 1186 1186 HOH HOH . D 4 HOH A 174 1187 1187 HOH HOH . D 4 HOH A 175 1188 1188 HOH HOH . D 4 HOH A 176 1189 1189 HOH HOH . D 4 HOH A 177 1190 1190 HOH HOH . D 4 HOH A 178 1191 1191 HOH HOH . D 4 HOH A 179 1194 1194 HOH HOH . D 4 HOH A 180 1196 1196 HOH HOH . D 4 HOH A 181 1197 1197 HOH HOH . D 4 HOH A 182 1198 1198 HOH HOH . D 4 HOH A 183 1200 1200 HOH HOH . D 4 HOH A 184 1201 1201 HOH HOH . D 4 HOH A 185 1202 1202 HOH HOH . D 4 HOH A 186 1204 1204 HOH HOH . D 4 HOH A 187 1205 1205 HOH HOH . D 4 HOH A 188 1207 1207 HOH HOH . D 4 HOH A 189 1208 1208 HOH HOH . D 4 HOH A 190 1209 1209 HOH HOH . D 4 HOH A 191 1210 1210 HOH HOH . D 4 HOH A 192 1212 1212 HOH HOH . D 4 HOH A 193 1213 1213 HOH HOH . D 4 HOH A 194 1214 1214 HOH HOH . D 4 HOH A 195 1215 1215 HOH HOH . D 4 HOH A 196 1216 1216 HOH HOH . D 4 HOH A 197 1218 1218 HOH HOH . D 4 HOH A 198 1221 1221 HOH HOH . D 4 HOH A 199 1222 1222 HOH HOH . D 4 HOH A 200 1223 1223 HOH HOH . D 4 HOH A 201 1224 1224 HOH HOH . D 4 HOH A 202 1225 1225 HOH HOH . D 4 HOH A 203 1226 1226 HOH HOH . D 4 HOH A 204 1227 1227 HOH HOH . D 4 HOH A 205 1229 1229 HOH HOH . D 4 HOH A 206 1230 1230 HOH HOH . D 4 HOH A 207 1232 1232 HOH HOH . D 4 HOH A 208 1234 1234 HOH HOH . D 4 HOH A 209 1235 1235 HOH HOH . D 4 HOH A 210 1236 1236 HOH HOH . D 4 HOH A 211 1238 1238 HOH HOH . D 4 HOH A 212 1239 1239 HOH HOH . D 4 HOH A 213 1240 1240 HOH HOH . D 4 HOH A 214 1241 1241 HOH HOH . D 4 HOH A 215 1242 1242 HOH HOH . D 4 HOH A 216 1245 1245 HOH HOH . D 4 HOH A 217 1246 1246 HOH HOH . D 4 HOH A 218 1247 1247 HOH HOH . D 4 HOH A 219 1248 1248 HOH HOH . E 4 HOH B 1 1001 1001 HOH HOH . E 4 HOH B 2 1042 1042 HOH HOH . E 4 HOH B 3 1047 1047 HOH HOH . E 4 HOH B 4 1053 1053 HOH HOH . E 4 HOH B 5 1072 1072 HOH HOH . E 4 HOH B 6 1095 1095 HOH HOH . E 4 HOH B 7 1105 1105 HOH HOH . E 4 HOH B 8 1131 1131 HOH HOH . E 4 HOH B 9 1135 1135 HOH HOH . E 4 HOH B 10 1159 1159 HOH HOH . E 4 HOH B 11 1163 1163 HOH HOH . E 4 HOH B 12 1164 1164 HOH HOH . E 4 HOH B 13 1168 1168 HOH HOH . E 4 HOH B 14 1180 1180 HOH HOH . E 4 HOH B 15 1199 1199 HOH HOH . E 4 HOH B 16 1217 1217 HOH HOH . E 4 HOH B 17 1219 1219 HOH HOH . E 4 HOH B 18 1220 1220 HOH HOH . E 4 HOH B 19 1233 1233 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACY . . . C 3 -11.66 71.74 36.31 1 11.94 ? C ACY 600 A 1 HETATM 2 O O ACY . . . C 3 -10.946 71.895 37.263 1 13.66 ? O ACY 600 A 1 HETATM 3 O OXT ACY . . . C 3 -12.753 72.188 36.079 1 15.16 ? OXT ACY 600 A 1 HETATM 4 C CH3 ACY . . . C 3 -10.853 70.867 35.124 1 13.43 ? CH3 ACY 600 A 1 # _model_server_stats.io_time_ms 239 _model_server_stats.parse_time_ms 127 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 368 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 4 #