data_1NNI # _model_server_result.job_id CP6KTt65CKtChiKm-qaE8w _model_server_result.datetime_utc '2024-11-09 02:02:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1nni # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":200}' # _entry.id 1NNI # _exptl.entry_id 1NNI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1NNI _cell.length_a 112.72 _cell.length_b 112.72 _cell.length_c 90.011 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NNI _symmetry.cell_setting hexagonal _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 62 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_664 -y+1,-x+1,-z-1/3 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 56.36 97.618384 -30.003667 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MSE 1 1 MSE 1 1_555 A N ASN 2 1 ASN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A C ASN 2 1 ASN 2 1_555 A N MSE 3 1 MSE 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale3 A C MSE 3 1 MSE 3 1_555 A N LEU 4 1 LEU 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale4 A C GLY 77 1 GLY 77 1_555 A N MSE 78 1 MSE 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale5 A C MSE 78 1 MSE 78 1_555 A N SER 79 1 SER 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale6 A C ASN 117 1 ASN 117 1_555 A N MSE 118 1 MSE 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale7 A C MSE 118 1 MSE 118 1_555 A N ARG 119 1 ARG 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? covale ? covale8 A C VAL 121 1 VAL 121 1_555 A N MSE 122 1 MSE 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale9 A C MSE 122 1 MSE 122 1_555 A N ARG 123 1 ARG 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale10 A C SER 164 1 SER 164 1_555 A N MSE 165 1 MSE 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale11 A C MSE 165 1 MSE 165 1_555 A N PHE 166 1 PHE 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # _atom_sites.entry_id 1NNI _atom_sites.fract_transf_matrix[1][1] 0.008872 _atom_sites.fract_transf_matrix[1][2] 0.005122 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010244 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01111 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN 1 1 200 200 FMN FMN . C 3 HOH 1 1 201 1 HOH HOH . C 3 HOH 1 2 202 2 HOH HOH . C 3 HOH 1 3 203 3 HOH HOH . C 3 HOH 1 4 204 4 HOH HOH . C 3 HOH 1 5 205 5 HOH HOH . C 3 HOH 1 6 206 6 HOH HOH . C 3 HOH 1 7 207 7 HOH HOH . C 3 HOH 1 8 208 8 HOH HOH . C 3 HOH 1 9 209 9 HOH HOH . C 3 HOH 1 10 210 10 HOH HOH . C 3 HOH 1 11 211 11 HOH HOH . C 3 HOH 1 12 212 12 HOH HOH . C 3 HOH 1 13 213 13 HOH HOH . C 3 HOH 1 14 214 14 HOH HOH . C 3 HOH 1 15 215 15 HOH HOH . C 3 HOH 1 16 216 16 HOH HOH . C 3 HOH 1 17 217 17 HOH HOH . C 3 HOH 1 18 218 18 HOH HOH . C 3 HOH 1 19 219 19 HOH HOH . C 3 HOH 1 20 220 20 HOH HOH . C 3 HOH 1 21 221 21 HOH HOH . C 3 HOH 1 22 222 22 HOH HOH . C 3 HOH 1 23 223 23 HOH HOH . C 3 HOH 1 24 224 24 HOH HOH . C 3 HOH 1 25 225 25 HOH HOH . C 3 HOH 1 26 226 26 HOH HOH . C 3 HOH 1 27 227 27 HOH HOH . C 3 HOH 1 28 228 28 HOH HOH . C 3 HOH 1 29 229 29 HOH HOH . C 3 HOH 1 30 230 30 HOH HOH . C 3 HOH 1 31 231 31 HOH HOH . C 3 HOH 1 32 232 32 HOH HOH . C 3 HOH 1 33 233 33 HOH HOH . C 3 HOH 1 34 234 34 HOH HOH . C 3 HOH 1 35 235 35 HOH HOH . C 3 HOH 1 36 236 36 HOH HOH . C 3 HOH 1 37 237 37 HOH HOH . C 3 HOH 1 38 238 38 HOH HOH . C 3 HOH 1 39 239 39 HOH HOH . C 3 HOH 1 40 240 40 HOH HOH . C 3 HOH 1 41 241 41 HOH HOH . C 3 HOH 1 42 242 42 HOH HOH . C 3 HOH 1 43 243 43 HOH HOH . C 3 HOH 1 44 244 44 HOH HOH . C 3 HOH 1 45 245 45 HOH HOH . C 3 HOH 1 46 246 46 HOH HOH . C 3 HOH 1 47 247 47 HOH HOH . C 3 HOH 1 48 248 48 HOH HOH . C 3 HOH 1 49 249 49 HOH HOH . C 3 HOH 1 50 250 50 HOH HOH . C 3 HOH 1 51 251 51 HOH HOH . C 3 HOH 1 52 252 52 HOH HOH . C 3 HOH 1 53 253 53 HOH HOH . C 3 HOH 1 54 254 54 HOH HOH . C 3 HOH 1 55 255 55 HOH HOH . C 3 HOH 1 56 256 56 HOH HOH . C 3 HOH 1 57 257 57 HOH HOH . C 3 HOH 1 58 258 58 HOH HOH . C 3 HOH 1 59 259 59 HOH HOH . C 3 HOH 1 60 260 60 HOH HOH . C 3 HOH 1 61 261 61 HOH HOH . C 3 HOH 1 62 262 62 HOH HOH . C 3 HOH 1 63 263 63 HOH HOH . C 3 HOH 1 64 264 64 HOH HOH . C 3 HOH 1 65 265 65 HOH HOH . C 3 HOH 1 66 266 66 HOH HOH . C 3 HOH 1 67 267 67 HOH HOH . C 3 HOH 1 68 268 68 HOH HOH . C 3 HOH 1 69 269 69 HOH HOH . C 3 HOH 1 70 270 70 HOH HOH . C 3 HOH 1 71 271 71 HOH HOH . C 3 HOH 1 72 272 72 HOH HOH . C 3 HOH 1 73 273 73 HOH HOH . C 3 HOH 1 74 274 74 HOH HOH . C 3 HOH 1 75 275 75 HOH HOH . C 3 HOH 1 76 276 76 HOH HOH . C 3 HOH 1 77 277 77 HOH HOH . C 3 HOH 1 78 278 78 HOH HOH . C 3 HOH 1 79 279 79 HOH HOH . C 3 HOH 1 80 280 80 HOH HOH . C 3 HOH 1 81 281 81 HOH HOH . C 3 HOH 1 82 282 82 HOH HOH . C 3 HOH 1 83 283 83 HOH HOH . C 3 HOH 1 84 284 84 HOH HOH . C 3 HOH 1 85 285 85 HOH HOH . C 3 HOH 1 86 286 86 HOH HOH . C 3 HOH 1 87 287 87 HOH HOH . C 3 HOH 1 88 288 88 HOH HOH . C 3 HOH 1 89 289 89 HOH HOH . C 3 HOH 1 90 290 90 HOH HOH . C 3 HOH 1 91 291 91 HOH HOH . C 3 HOH 1 92 292 92 HOH HOH . C 3 HOH 1 93 293 93 HOH HOH . C 3 HOH 1 94 294 94 HOH HOH . C 3 HOH 1 95 295 95 HOH HOH . C 3 HOH 1 96 296 96 HOH HOH . C 3 HOH 1 97 297 97 HOH HOH . C 3 HOH 1 98 298 98 HOH HOH . C 3 HOH 1 99 299 99 HOH HOH . C 3 HOH 1 100 300 100 HOH HOH . C 3 HOH 1 101 301 101 HOH HOH . C 3 HOH 1 102 302 102 HOH HOH . C 3 HOH 1 103 303 103 HOH HOH . C 3 HOH 1 104 304 104 HOH HOH . C 3 HOH 1 105 305 105 HOH HOH . C 3 HOH 1 106 306 106 HOH HOH . C 3 HOH 1 107 307 107 HOH HOH . C 3 HOH 1 108 308 108 HOH HOH . C 3 HOH 1 109 309 109 HOH HOH . C 3 HOH 1 110 310 110 HOH HOH . C 3 HOH 1 111 311 111 HOH HOH . C 3 HOH 1 112 312 112 HOH HOH . C 3 HOH 1 113 313 113 HOH HOH . C 3 HOH 1 114 314 114 HOH HOH . C 3 HOH 1 115 315 115 HOH HOH . C 3 HOH 1 116 316 116 HOH HOH . C 3 HOH 1 117 317 117 HOH HOH . C 3 HOH 1 118 318 118 HOH HOH . C 3 HOH 1 119 319 119 HOH HOH . C 3 HOH 1 120 320 120 HOH HOH . C 3 HOH 1 121 321 121 HOH HOH . C 3 HOH 1 122 322 122 HOH HOH . C 3 HOH 1 123 323 123 HOH HOH . C 3 HOH 1 124 324 124 HOH HOH . C 3 HOH 1 125 325 125 HOH HOH . C 3 HOH 1 126 326 126 HOH HOH . C 3 HOH 1 127 327 127 HOH HOH . C 3 HOH 1 128 328 128 HOH HOH . C 3 HOH 1 129 329 129 HOH HOH . C 3 HOH 1 130 330 130 HOH HOH . C 3 HOH 1 131 331 131 HOH HOH . C 3 HOH 1 132 332 132 HOH HOH . C 3 HOH 1 133 333 133 HOH HOH . C 3 HOH 1 134 334 134 HOH HOH . C 3 HOH 1 135 335 135 HOH HOH . C 3 HOH 1 136 336 136 HOH HOH . C 3 HOH 1 137 337 137 HOH HOH . C 3 HOH 1 138 338 138 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . B 2 12.285 41.967 -18.053 1 71.27 ? N1 FMN 200 1 1 HETATM 2 C C2 FMN . . . B 2 13.583 41.596 -18.054 1 70.75 ? C2 FMN 200 1 1 HETATM 3 O O2 FMN . . . B 2 14.104 40.601 -17.541 1 71.82 ? O2 FMN 200 1 1 HETATM 4 N N3 FMN . . . B 2 14.552 42.472 -18.742 1 70.76 ? N3 FMN 200 1 1 HETATM 5 C C4 FMN . . . B 2 14.17 43.684 -19.405 1 70.36 ? C4 FMN 200 1 1 HETATM 6 O O4 FMN . . . B 2 15.108 44.304 -19.933 1 68.88 ? O4 FMN 200 1 1 HETATM 7 C C4A FMN . . . B 2 12.83 44.002 -19.363 1 70.74 ? C4A FMN 200 1 1 HETATM 8 N N5 FMN . . . B 2 12.453 45.098 -19.946 1 71.24 ? N5 FMN 200 1 1 HETATM 9 C C5A FMN . . . B 2 11.092 45.49 -19.931 1 71.93 ? C5A FMN 200 1 1 HETATM 10 C C6 FMN . . . B 2 10.618 46.688 -20.541 1 73.43 ? C6 FMN 200 1 1 HETATM 11 C C7 FMN . . . B 2 9.201 47.043 -20.476 1 73.66 ? C7 FMN 200 1 1 HETATM 12 C C7M FMN . . . B 2 8.984 48.371 -21.203 1 73.97 ? C7M FMN 200 1 1 HETATM 13 C C8 FMN . . . B 2 8.255 46.17 -19.793 1 72.9 ? C8 FMN 200 1 1 HETATM 14 C C8M FMN . . . B 2 6.835 46.549 -19.74 1 73.76 ? C8M FMN 200 1 1 HETATM 15 C C9 FMN . . . B 2 8.701 45.007 -19.201 1 72.46 ? C9 FMN 200 1 1 HETATM 16 C C9A FMN . . . B 2 10.139 44.592 -19.229 1 72.23 ? C9A FMN 200 1 1 HETATM 17 N N10 FMN . . . B 2 10.487 43.404 -18.594 1 71.22 ? N10 FMN 200 1 1 HETATM 18 C C10 FMN . . . B 2 11.819 43.081 -18.643 1 70.99 ? C10 FMN 200 1 1 HETATM 19 C C1' FMN . . . B 2 9.566 42.509 -17.9 1 69.34 ? C1' FMN 200 1 1 HETATM 20 C C2' FMN . . . B 2 9.403 42.805 -16.435 1 69.07 ? C2' FMN 200 1 1 HETATM 21 O O2' FMN . . . B 2 10.634 42.596 -15.784 1 70.03 ? O2' FMN 200 1 1 HETATM 22 C C3' FMN . . . B 2 8.372 41.851 -15.963 1 67.91 ? C3' FMN 200 1 1 HETATM 23 O O3' FMN . . . B 2 7.08 42.433 -16.313 1 67.29 ? O3' FMN 200 1 1 HETATM 24 C C4' FMN . . . B 2 8.225 41.608 -14.452 1 67.77 ? C4' FMN 200 1 1 HETATM 25 O O4' FMN . . . B 2 7.189 40.679 -14.216 1 67.22 ? O4' FMN 200 1 1 HETATM 26 C C5' FMN . . . B 2 7.999 42.878 -13.588 1 67.41 ? C5' FMN 200 1 1 HETATM 27 O O5' FMN . . . B 2 6.641 43.277 -13.858 1 65.64 ? O5' FMN 200 1 1 HETATM 28 P P FMN . . . B 2 6.176 44.647 -13.296 1 62.81 ? P FMN 200 1 1 HETATM 29 O O1P FMN . . . B 2 4.708 44.721 -13.774 1 65.2 ? O1P FMN 200 1 1 HETATM 30 O O2P FMN . . . B 2 6.279 44.619 -11.814 1 62.6 ? O2P FMN 200 1 1 HETATM 31 O O3P FMN . . . B 2 6.984 45.775 -13.941 1 66.46 ? O3P FMN 200 1 1 # _model_server_stats.io_time_ms 44 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 31 #