data_1NOC # _model_server_result.job_id '_MdJYtWBMSAvSpABPtZsgg' _model_server_result.datetime_utc '2024-10-19 11:51:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1noc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":902}' # _entry.id 1NOC # _exptl.entry_id 1NOC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 69.085 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description IMIDAZOLE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1NOC _cell.length_a 147.5 _cell.length_b 147.5 _cell.length_c 147.5 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NOC _symmetry.cell_setting ? _symmetry.Int_Tables_number 198 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? trimeric 3 author_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F 1 1,2,3 B,G 2 1,4,5 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 3 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 4 'crystal symmetry operation' 8_656 -z+1,x+1/2,-y+3/2 0 0 -1 1 0 0 0 -1 0 147.5 73.75 221.25 5 'crystal symmetry operation' 11_466 y-1/2,-z+3/2,-x+1 0 1 0 0 0 -1 -1 0 0 -73.75 221.25 147.5 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 80 A CYS 194 1_555 C FE HEM . A HEM 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc2 C FE HEM . A HEM 901 1_555 D N1 IMD . A IMD 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? # _chem_comp.formula 'C3 H5 N2 1' _chem_comp.formula_weight 69.085 _chem_comp.id IMD _chem_comp.mon_nstd_flag . _chem_comp.name IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 IMD sing 255 n y N1 C5 IMD sing 256 n y N1 HN1 IMD sing 257 n n C2 N3 IMD doub 258 n y C2 H2 IMD sing 259 n n N3 C4 IMD sing 260 n y N3 HN3 IMD sing 261 n n C4 C5 IMD doub 262 n y C4 H4 IMD sing 263 n n C5 H5 IMD sing 264 n n # _atom_sites.entry_id 1NOC _atom_sites.fract_transf_matrix[1][1] 0.00678 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00678 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00678 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HEM A 1 901 901 HEM HEM . D 4 IMD A 1 902 902 IMD IMD . E 4 IMD A 1 903 903 IMD IMD . F 5 HOH A 1 904 1 HOH HOH . F 5 HOH A 2 905 2 HOH HOH . F 5 HOH A 3 906 3 HOH HOH . F 5 HOH A 4 907 4 HOH HOH . F 5 HOH A 5 908 5 HOH HOH . F 5 HOH A 6 909 6 HOH HOH . F 5 HOH A 7 910 7 HOH HOH . F 5 HOH A 8 911 8 HOH HOH . F 5 HOH A 9 912 9 HOH HOH . F 5 HOH A 10 913 10 HOH HOH . F 5 HOH A 11 914 11 HOH HOH . F 5 HOH A 12 915 13 HOH HOH . F 5 HOH A 13 916 14 HOH HOH . F 5 HOH A 14 917 15 HOH HOH . F 5 HOH A 15 918 16 HOH HOH . F 5 HOH A 16 919 17 HOH HOH . F 5 HOH A 17 920 18 HOH HOH . F 5 HOH A 18 921 19 HOH HOH . F 5 HOH A 19 922 20 HOH HOH . F 5 HOH A 20 923 21 HOH HOH . F 5 HOH A 21 924 24 HOH HOH . F 5 HOH A 22 925 25 HOH HOH . F 5 HOH A 23 926 26 HOH HOH . F 5 HOH A 24 927 27 HOH HOH . F 5 HOH A 25 928 28 HOH HOH . F 5 HOH A 26 929 29 HOH HOH . F 5 HOH A 27 930 30 HOH HOH . F 5 HOH A 28 931 31 HOH HOH . F 5 HOH A 29 932 32 HOH HOH . F 5 HOH A 30 933 33 HOH HOH . F 5 HOH A 31 934 34 HOH HOH . F 5 HOH A 32 935 35 HOH HOH . F 5 HOH A 33 936 36 HOH HOH . F 5 HOH A 34 937 37 HOH HOH . F 5 HOH A 35 938 38 HOH HOH . F 5 HOH A 36 939 39 HOH HOH . F 5 HOH A 37 940 40 HOH HOH . F 5 HOH A 38 941 41 HOH HOH . F 5 HOH A 39 942 42 HOH HOH . F 5 HOH A 40 943 43 HOH HOH . F 5 HOH A 41 944 44 HOH HOH . F 5 HOH A 42 945 45 HOH HOH . F 5 HOH A 43 946 46 HOH HOH . F 5 HOH A 44 947 47 HOH HOH . F 5 HOH A 45 948 48 HOH HOH . F 5 HOH A 46 949 49 HOH HOH . F 5 HOH A 47 950 50 HOH HOH . F 5 HOH A 48 951 51 HOH HOH . F 5 HOH A 49 952 52 HOH HOH . F 5 HOH A 50 953 53 HOH HOH . F 5 HOH A 51 954 54 HOH HOH . F 5 HOH A 52 955 55 HOH HOH . F 5 HOH A 53 956 56 HOH HOH . F 5 HOH A 54 957 57 HOH HOH . F 5 HOH A 55 958 58 HOH HOH . F 5 HOH A 56 959 59 HOH HOH . F 5 HOH A 57 960 60 HOH HOH . F 5 HOH A 58 961 61 HOH HOH . F 5 HOH A 59 962 62 HOH HOH . F 5 HOH A 60 963 63 HOH HOH . F 5 HOH A 61 964 64 HOH HOH . F 5 HOH A 62 965 65 HOH HOH . F 5 HOH A 63 966 66 HOH HOH . F 5 HOH A 64 967 67 HOH HOH . F 5 HOH A 65 968 68 HOH HOH . F 5 HOH A 66 969 69 HOH HOH . F 5 HOH A 67 970 70 HOH HOH . F 5 HOH A 68 971 71 HOH HOH . F 5 HOH A 69 972 72 HOH HOH . F 5 HOH A 70 973 73 HOH HOH . F 5 HOH A 71 974 74 HOH HOH . F 5 HOH A 72 975 75 HOH HOH . F 5 HOH A 73 976 76 HOH HOH . F 5 HOH A 74 977 77 HOH HOH . F 5 HOH A 75 978 78 HOH HOH . F 5 HOH A 76 979 79 HOH HOH . F 5 HOH A 77 980 80 HOH HOH . F 5 HOH A 78 981 81 HOH HOH . F 5 HOH A 79 982 82 HOH HOH . F 5 HOH A 80 983 83 HOH HOH . F 5 HOH A 81 984 84 HOH HOH . F 5 HOH A 82 985 85 HOH HOH . F 5 HOH A 83 986 86 HOH HOH . F 5 HOH A 84 987 87 HOH HOH . F 5 HOH A 85 988 88 HOH HOH . F 5 HOH A 86 989 89 HOH HOH . F 5 HOH A 87 990 90 HOH HOH . F 5 HOH A 88 991 91 HOH HOH . F 5 HOH A 89 992 92 HOH HOH . F 5 HOH A 90 993 93 HOH HOH . F 5 HOH A 91 994 94 HOH HOH . F 5 HOH A 92 995 95 HOH HOH . F 5 HOH A 93 996 96 HOH HOH . F 5 HOH A 94 997 97 HOH HOH . F 5 HOH A 95 998 98 HOH HOH . F 5 HOH A 96 999 99 HOH HOH . F 5 HOH A 97 1000 100 HOH HOH . F 5 HOH A 98 1001 101 HOH HOH . F 5 HOH A 99 1002 102 HOH HOH . F 5 HOH A 100 1003 103 HOH HOH . F 5 HOH A 101 1004 104 HOH HOH . F 5 HOH A 102 1005 105 HOH HOH . F 5 HOH A 103 1006 106 HOH HOH . F 5 HOH A 104 1007 107 HOH HOH . F 5 HOH A 105 1008 108 HOH HOH . F 5 HOH A 106 1009 109 HOH HOH . F 5 HOH A 107 1010 110 HOH HOH . F 5 HOH A 108 1011 119 HOH HOH . F 5 HOH A 109 1012 120 HOH HOH . F 5 HOH A 110 1013 121 HOH HOH . F 5 HOH A 111 1014 122 HOH HOH . F 5 HOH A 112 1015 123 HOH HOH . F 5 HOH A 113 1016 124 HOH HOH . F 5 HOH A 114 1017 125 HOH HOH . F 5 HOH A 115 1018 126 HOH HOH . F 5 HOH A 116 1019 127 HOH HOH . F 5 HOH A 117 1020 128 HOH HOH . F 5 HOH A 118 1021 129 HOH HOH . F 5 HOH A 119 1022 130 HOH HOH . F 5 HOH A 120 1023 131 HOH HOH . F 5 HOH A 121 1024 132 HOH HOH . F 5 HOH A 122 1025 133 HOH HOH . F 5 HOH A 123 1026 134 HOH HOH . F 5 HOH A 124 1027 135 HOH HOH . F 5 HOH A 125 1028 136 HOH HOH . F 5 HOH A 126 1029 140 HOH HOH . G 5 HOH B 1 220 12 HOH HOH . G 5 HOH B 2 221 22 HOH HOH . G 5 HOH B 3 222 23 HOH HOH . G 5 HOH B 4 223 111 HOH HOH . G 5 HOH B 5 224 112 HOH HOH . G 5 HOH B 6 225 113 HOH HOH . G 5 HOH B 7 226 114 HOH HOH . G 5 HOH B 8 227 115 HOH HOH . G 5 HOH B 9 228 116 HOH HOH . G 5 HOH B 10 229 117 HOH HOH . G 5 HOH B 11 230 118 HOH HOH . G 5 HOH B 12 231 137 HOH HOH . G 5 HOH B 13 232 138 HOH HOH . G 5 HOH B 14 233 139 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IMD . . . D 4 91.39 85.563 117.454 1 36.38 ? N1 IMD 902 A 1 HETATM 2 C C2 IMD . . . D 4 90.561 84.69 116.893 1 35.36 ? C2 IMD 902 A 1 HETATM 3 N N3 IMD . . . D 4 90.464 83.642 117.685 1 33.6 ? N3 IMD 902 A 1 HETATM 4 C C4 IMD . . . D 4 91.25 83.834 118.792 1 26.37 ? C4 IMD 902 A 1 HETATM 5 C C5 IMD . . . D 4 91.84 85.045 118.653 1 38.19 ? C5 IMD 902 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 5 #