data_1NOL # _model_server_result.job_id 1mL1vJmLE7AGYJasxZuM0Q _model_server_result.datetime_utc '2024-12-26 13:28:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1nol # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":631}' # _entry.id 1NOL # _exptl.entry_id 1NOL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 31.999 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PEROXIDE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 60.02 _cell.angle_beta 60.02 _cell.angle_gamma 60.02 _cell.entry_id 1NOL _cell.length_a 117.002 _cell.length_b 117.002 _cell.length_c 117.002 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NOL _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'R 3 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 534 A CYS 534 1_555 A SG CYS 576 A CYS 576 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf2 A SG CYS 536 A CYS 536 1_555 A SG CYS 583 A CYS 583 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? metalc ? metalc1 A NE2 HIS 173 A HIS 173 1_555 B CU CU . A CU 629 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.939 ? metalc ? metalc2 A NE2 HIS 177 A HIS 177 1_555 B CU CU . A CU 629 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? metalc ? metalc3 A NE2 HIS 204 A HIS 204 1_555 B CU CU . A CU 629 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc4 A NE2 HIS 324 A HIS 324 1_555 C CU CU . A CU 630 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.971 ? metalc ? metalc5 A NE2 HIS 328 A HIS 328 1_555 C CU CU . A CU 630 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc6 A NE2 HIS 364 A HIS 364 1_555 C CU CU . A CU 630 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.945 ? metalc ? metalc7 A O SER 507 A SER 507 1_555 D CA CA . A CA 632 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? metalc ? metalc8 A O THR 510 A THR 510 1_555 D CA CA . A CA 632 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc9 A O ASP 578 A ASP 578 1_555 D CA CA . A CA 632 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc10 A OD1 ASP 578 A ASP 578 1_555 D CA CA . A CA 632 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.521 ? metalc ? metalc11 B CU CU . A CU 629 1_555 F O1 PER . A PER 631 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.815 ? metalc ? metalc12 B CU CU . A CU 629 1_555 F O2 PER . A PER 631 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.932 ? metalc ? metalc13 C CU CU . A CU 630 1_555 F O1 PER . A PER 631 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.966 ? metalc ? metalc14 C CU CU . A CU 630 1_555 F O2 PER . A PER 631 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? metalc ? metalc15 D CA CA . A CA 632 1_555 G O HOH . A HOH 781 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? metalc ? metalc16 D CA CA . A CA 632 1_555 G O HOH . A HOH 794 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.834 ? # _chem_comp.formula 'O2 -2' _chem_comp.formula_weight 31.999 _chem_comp.id PER _chem_comp.mon_nstd_flag . _chem_comp.name 'PEROXIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _chem_comp_bond.atom_id_1 O1 _chem_comp_bond.atom_id_2 O2 _chem_comp_bond.comp_id PER _chem_comp_bond.value_order sing _chem_comp_bond.pdbx_ordinal 240 _chem_comp_bond.pdbx_stereo_config n _chem_comp_bond.pdbx_aromatic_flag n # _atom_sites.entry_id 1NOL _atom_sites.fract_transf_matrix[1][1] 0.008547 _atom_sites.fract_transf_matrix[1][2] -0.004931 _atom_sites.fract_transf_matrix[1][3] -0.003487 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009867 _atom_sites.fract_transf_matrix[2][3] -0.003487 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010465 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CU A 1 629 629 CU CU . C 2 CU A 1 630 630 CU CU . D 3 CA A 1 632 632 CA CA . E 4 NO3 A 1 633 633 NO3 NO3 . F 5 PER A 1 631 631 PER PER . G 6 HOH A 1 634 634 HOH HOH . G 6 HOH A 2 635 635 HOH HOH . G 6 HOH A 3 636 636 HOH HOH . G 6 HOH A 4 637 637 HOH HOH . G 6 HOH A 5 638 638 HOH HOH . G 6 HOH A 6 639 639 HOH HOH . G 6 HOH A 7 640 640 HOH HOH . G 6 HOH A 8 641 641 HOH HOH . G 6 HOH A 9 642 642 HOH HOH . G 6 HOH A 10 643 643 HOH HOH . G 6 HOH A 11 644 644 HOH HOH . G 6 HOH A 12 645 645 HOH HOH . G 6 HOH A 13 646 646 HOH HOH . G 6 HOH A 14 647 647 HOH HOH . G 6 HOH A 15 648 648 HOH HOH . G 6 HOH A 16 649 649 HOH HOH . G 6 HOH A 17 650 650 HOH HOH . G 6 HOH A 18 651 651 HOH HOH . G 6 HOH A 19 652 652 HOH HOH . G 6 HOH A 20 653 653 HOH HOH . G 6 HOH A 21 654 654 HOH HOH . G 6 HOH A 22 655 655 HOH HOH . G 6 HOH A 23 656 656 HOH HOH . G 6 HOH A 24 657 657 HOH HOH . G 6 HOH A 25 658 658 HOH HOH . G 6 HOH A 26 659 659 HOH HOH . G 6 HOH A 27 660 660 HOH HOH . G 6 HOH A 28 661 661 HOH HOH . G 6 HOH A 29 662 662 HOH HOH . G 6 HOH A 30 663 663 HOH HOH . G 6 HOH A 31 664 664 HOH HOH . G 6 HOH A 32 665 665 HOH HOH . G 6 HOH A 33 666 666 HOH HOH . G 6 HOH A 34 667 667 HOH HOH . G 6 HOH A 35 668 668 HOH HOH . G 6 HOH A 36 669 669 HOH HOH . G 6 HOH A 37 670 670 HOH HOH . G 6 HOH A 38 671 671 HOH HOH . G 6 HOH A 39 672 672 HOH HOH . G 6 HOH A 40 673 673 HOH HOH . G 6 HOH A 41 674 674 HOH HOH . G 6 HOH A 42 675 675 HOH HOH . G 6 HOH A 43 676 676 HOH HOH . G 6 HOH A 44 677 677 HOH HOH . G 6 HOH A 45 678 678 HOH HOH . G 6 HOH A 46 679 679 HOH HOH . G 6 HOH A 47 680 680 HOH HOH . G 6 HOH A 48 681 681 HOH HOH . G 6 HOH A 49 682 682 HOH HOH . G 6 HOH A 50 683 683 HOH HOH . G 6 HOH A 51 684 684 HOH HOH . G 6 HOH A 52 685 685 HOH HOH . G 6 HOH A 53 686 686 HOH HOH . G 6 HOH A 54 687 687 HOH HOH . G 6 HOH A 55 688 688 HOH HOH . G 6 HOH A 56 689 689 HOH HOH . G 6 HOH A 57 690 690 HOH HOH . G 6 HOH A 58 691 691 HOH HOH . G 6 HOH A 59 692 692 HOH HOH . G 6 HOH A 60 693 693 HOH HOH . G 6 HOH A 61 694 694 HOH HOH . G 6 HOH A 62 695 695 HOH HOH . G 6 HOH A 63 696 696 HOH HOH . G 6 HOH A 64 697 697 HOH HOH . G 6 HOH A 65 698 698 HOH HOH . G 6 HOH A 66 699 699 HOH HOH . G 6 HOH A 67 700 700 HOH HOH . G 6 HOH A 68 701 701 HOH HOH . G 6 HOH A 69 702 702 HOH HOH . G 6 HOH A 70 703 703 HOH HOH . G 6 HOH A 71 704 704 HOH HOH . G 6 HOH A 72 705 705 HOH HOH . G 6 HOH A 73 706 706 HOH HOH . G 6 HOH A 74 707 707 HOH HOH . G 6 HOH A 75 708 708 HOH HOH . G 6 HOH A 76 709 709 HOH HOH . G 6 HOH A 77 710 710 HOH HOH . G 6 HOH A 78 711 711 HOH HOH . G 6 HOH A 79 712 712 HOH HOH . G 6 HOH A 80 713 713 HOH HOH . G 6 HOH A 81 714 714 HOH HOH . G 6 HOH A 82 715 715 HOH HOH . G 6 HOH A 83 716 716 HOH HOH . G 6 HOH A 84 717 717 HOH HOH . G 6 HOH A 85 718 718 HOH HOH . G 6 HOH A 86 719 719 HOH HOH . G 6 HOH A 87 720 720 HOH HOH . G 6 HOH A 88 721 721 HOH HOH . G 6 HOH A 89 722 722 HOH HOH . G 6 HOH A 90 723 723 HOH HOH . G 6 HOH A 91 724 724 HOH HOH . G 6 HOH A 92 725 725 HOH HOH . G 6 HOH A 93 726 726 HOH HOH . G 6 HOH A 94 727 727 HOH HOH . G 6 HOH A 95 728 728 HOH HOH . G 6 HOH A 96 729 729 HOH HOH . G 6 HOH A 97 730 730 HOH HOH . G 6 HOH A 98 731 731 HOH HOH . G 6 HOH A 99 732 732 HOH HOH . G 6 HOH A 100 733 733 HOH HOH . G 6 HOH A 101 734 734 HOH HOH . G 6 HOH A 102 735 735 HOH HOH . G 6 HOH A 103 736 736 HOH HOH . G 6 HOH A 104 737 737 HOH HOH . G 6 HOH A 105 738 738 HOH HOH . G 6 HOH A 106 739 739 HOH HOH . G 6 HOH A 107 740 740 HOH HOH . G 6 HOH A 108 741 741 HOH HOH . G 6 HOH A 109 742 742 HOH HOH . G 6 HOH A 110 743 743 HOH HOH . G 6 HOH A 111 744 744 HOH HOH . G 6 HOH A 112 745 745 HOH HOH . G 6 HOH A 113 746 746 HOH HOH . G 6 HOH A 114 747 747 HOH HOH . G 6 HOH A 115 748 748 HOH HOH . G 6 HOH A 116 749 749 HOH HOH . G 6 HOH A 117 750 750 HOH HOH . G 6 HOH A 118 751 751 HOH HOH . G 6 HOH A 119 752 752 HOH HOH . G 6 HOH A 120 753 753 HOH HOH . G 6 HOH A 121 754 754 HOH HOH . G 6 HOH A 122 755 755 HOH HOH . G 6 HOH A 123 756 756 HOH HOH . G 6 HOH A 124 757 757 HOH HOH . G 6 HOH A 125 758 758 HOH HOH . G 6 HOH A 126 759 759 HOH HOH . G 6 HOH A 127 760 760 HOH HOH . G 6 HOH A 128 761 761 HOH HOH . G 6 HOH A 129 762 762 HOH HOH . G 6 HOH A 130 763 763 HOH HOH . G 6 HOH A 131 764 764 HOH HOH . G 6 HOH A 132 765 765 HOH HOH . G 6 HOH A 133 766 766 HOH HOH . G 6 HOH A 134 767 767 HOH HOH . G 6 HOH A 135 768 768 HOH HOH . G 6 HOH A 136 769 769 HOH HOH . G 6 HOH A 137 770 770 HOH HOH . G 6 HOH A 138 771 771 HOH HOH . G 6 HOH A 139 772 772 HOH HOH . G 6 HOH A 140 773 773 HOH HOH . G 6 HOH A 141 774 774 HOH HOH . G 6 HOH A 142 775 775 HOH HOH . G 6 HOH A 143 776 776 HOH HOH . G 6 HOH A 144 777 777 HOH HOH . G 6 HOH A 145 778 778 HOH HOH . G 6 HOH A 146 779 779 HOH HOH . G 6 HOH A 147 780 780 HOH HOH . G 6 HOH A 148 781 781 HOH HOH . G 6 HOH A 149 782 782 HOH HOH . G 6 HOH A 150 783 783 HOH HOH . G 6 HOH A 151 784 784 HOH HOH . G 6 HOH A 152 785 785 HOH HOH . G 6 HOH A 153 786 786 HOH HOH . G 6 HOH A 154 787 787 HOH HOH . G 6 HOH A 155 788 788 HOH HOH . G 6 HOH A 156 789 789 HOH HOH . G 6 HOH A 157 790 790 HOH HOH . G 6 HOH A 158 791 791 HOH HOH . G 6 HOH A 159 792 792 HOH HOH . G 6 HOH A 160 793 793 HOH HOH . G 6 HOH A 161 794 794 HOH HOH . G 6 HOH A 162 795 795 HOH HOH . G 6 HOH A 163 796 796 HOH HOH . G 6 HOH A 164 797 797 HOH HOH . G 6 HOH A 165 798 798 HOH HOH . G 6 HOH A 166 799 799 HOH HOH . G 6 HOH A 167 800 800 HOH HOH . G 6 HOH A 168 801 801 HOH HOH . G 6 HOH A 169 802 802 HOH HOH . G 6 HOH A 170 803 803 HOH HOH . G 6 HOH A 171 804 804 HOH HOH . G 6 HOH A 172 805 805 HOH HOH . G 6 HOH A 173 806 806 HOH HOH . G 6 HOH A 174 807 807 HOH HOH . G 6 HOH A 175 808 808 HOH HOH . G 6 HOH A 176 809 809 HOH HOH . G 6 HOH A 177 810 810 HOH HOH . G 6 HOH A 178 811 811 HOH HOH . G 6 HOH A 179 812 812 HOH HOH . G 6 HOH A 180 813 813 HOH HOH . G 6 HOH A 181 814 814 HOH HOH . G 6 HOH A 182 815 815 HOH HOH . G 6 HOH A 183 816 816 HOH HOH . G 6 HOH A 184 817 817 HOH HOH . G 6 HOH A 185 818 818 HOH HOH . G 6 HOH A 186 819 819 HOH HOH . G 6 HOH A 187 820 820 HOH HOH . G 6 HOH A 188 821 821 HOH HOH . G 6 HOH A 189 822 822 HOH HOH . G 6 HOH A 190 823 823 HOH HOH . G 6 HOH A 191 824 824 HOH HOH . G 6 HOH A 192 825 825 HOH HOH . G 6 HOH A 193 826 826 HOH HOH . G 6 HOH A 194 827 827 HOH HOH . G 6 HOH A 195 828 828 HOH HOH . G 6 HOH A 196 829 829 HOH HOH . G 6 HOH A 197 830 830 HOH HOH . G 6 HOH A 198 831 831 HOH HOH . G 6 HOH A 199 832 832 HOH HOH . G 6 HOH A 200 833 833 HOH HOH . G 6 HOH A 201 834 834 HOH HOH . G 6 HOH A 202 835 835 HOH HOH . G 6 HOH A 203 836 836 HOH HOH . G 6 HOH A 204 837 837 HOH HOH . G 6 HOH A 205 838 838 HOH HOH . G 6 HOH A 206 839 839 HOH HOH . G 6 HOH A 207 840 840 HOH HOH . G 6 HOH A 208 841 841 HOH HOH . G 6 HOH A 209 842 842 HOH HOH . G 6 HOH A 210 843 843 HOH HOH . G 6 HOH A 211 844 844 HOH HOH . G 6 HOH A 212 845 845 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PER . . . F 5 31.9 -9.641 -3.015 1 7.56 ? O1 PER 631 A 1 HETATM 2 O O2 PER . . . F 5 32.335 -9.689 -1.723 1 7.23 ? O2 PER 631 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 249 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 2 #