data_1NQH # _model_server_result.job_id cbs_lV0oplKoxbsrm5mqog _model_server_result.datetime_utc '2024-11-07 06:41:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1nqh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":803}' # _entry.id 1NQH # _exptl.entry_id 1NQH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 306.438 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1NQH _cell.length_a 81.687 _cell.length_b 81.687 _cell.length_c 225.814 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NQH _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 179 A ASP 179 1_555 B CA CA . A CA 595 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? metalc ? metalc2 A OD1 ASP 179 A ASP 179 1_555 B CA CA . A CA 595 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.974 ? metalc ? metalc3 A NE2 GLN 191 A GLN 191 1_555 B CA CA . A CA 595 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.762 ? metalc ? metalc4 A O ASP 193 A ASP 193 1_555 B CA CA . A CA 595 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc5 A OD1 ASP 193 A ASP 193 1_555 B CA CA . A CA 595 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.252 ? metalc ? metalc6 A OD2 ASP 193 A ASP 193 1_555 C CA CA . A CA 596 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.119 ? metalc ? metalc7 A OD1 ASP 193 A ASP 193 1_555 C CA CA . A CA 596 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.862 ? metalc ? metalc8 A OD1 ASP 195 A ASP 195 1_555 B CA CA . A CA 595 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.725 ? metalc ? metalc9 A OD2 ASP 195 A ASP 195 1_555 B CA CA . A CA 595 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc10 A OD1 ASP 195 A ASP 195 1_555 C CA CA . A CA 596 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.958 ? metalc ? metalc11 A O TYR 229 A TYR 229 1_555 C CA CA . A CA 596 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.469 ? metalc ? metalc12 A OD2 ASP 230 A ASP 230 1_555 B CA CA . A CA 595 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc13 A OD1 ASP 230 A ASP 230 1_555 B CA CA . A CA 595 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.297 ? metalc ? metalc14 A OD1 ASP 230 A ASP 230 1_555 C CA CA . A CA 596 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? metalc ? metalc15 A OD1 ASP 241 A ASP 241 1_555 C CA CA . A CA 596 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.148 ? metalc ? metalc16 A OE1 GLU 378 A GLU 378 1_555 D CA CA . A CA 597 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.819 ? metalc ? metalc17 A OE2 GLU 378 A GLU 378 1_555 D CA CA . A CA 597 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.848 ? metalc ? metalc18 A OE2 GLU 381 A GLU 381 1_555 D CA CA . A CA 597 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.335 ? metalc ? metalc19 A OD1 ASP 411 A ASP 411 1_555 E CA CA . A CA 598 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.039 ? # _chem_comp.formula 'C16 H34 O5' _chem_comp.formula_weight 306.438 _chem_comp.id C8E _chem_comp.mon_nstd_flag . _chem_comp.name (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 C8E sing 70 n n C1 H11 C8E sing 71 n n C1 H12 C8E sing 72 n n C1 H13 C8E sing 73 n n C2 C3 C8E sing 74 n n C2 H21 C8E sing 75 n n C2 H22 C8E sing 76 n n C3 C4 C8E sing 77 n n C3 H31 C8E sing 78 n n C3 H32 C8E sing 79 n n C4 C5 C8E sing 80 n n C4 H41 C8E sing 81 n n C4 H42 C8E sing 82 n n C5 C6 C8E sing 83 n n C5 H51 C8E sing 84 n n C5 H52 C8E sing 85 n n C6 C7 C8E sing 86 n n C6 H61 C8E sing 87 n n C6 H62 C8E sing 88 n n C7 C8 C8E sing 89 n n C7 H71 C8E sing 90 n n C7 H72 C8E sing 91 n n C8 O9 C8E sing 92 n n C8 H81 C8E sing 93 n n C8 H82 C8E sing 94 n n O9 C10 C8E sing 95 n n C10 C11 C8E sing 96 n n C10 H101 C8E sing 97 n n C10 H102 C8E sing 98 n n C11 O12 C8E sing 99 n n C11 H111 C8E sing 100 n n C11 H112 C8E sing 101 n n O12 C13 C8E sing 102 n n C13 C14 C8E sing 103 n n C13 H131 C8E sing 104 n n C13 H132 C8E sing 105 n n C14 O15 C8E sing 106 n n C14 H141 C8E sing 107 n n C14 H142 C8E sing 108 n n O15 C16 C8E sing 109 n n C16 C17 C8E sing 110 n n C16 H161 C8E sing 111 n n C16 H162 C8E sing 112 n n C17 O18 C8E sing 113 n n C17 H171 C8E sing 114 n n C17 H172 C8E sing 115 n n O18 C19 C8E sing 116 n n C19 C20 C8E sing 117 n n C19 H191 C8E sing 118 n n C19 H192 C8E sing 119 n n C20 O21 C8E sing 120 n n C20 H201 C8E sing 121 n n C20 H202 C8E sing 122 n n O21 HO2 C8E sing 123 n n # _atom_sites.entry_id 1NQH _atom_sites.fract_transf_matrix[1][1] 0.012242 _atom_sites.fract_transf_matrix[1][2] 0.007068 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014136 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004428 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 595 1 CA CA . C 2 CA A 1 596 2 CA CA . D 2 CA A 1 597 3 CA CA . E 2 CA A 1 598 4 CA CA . F 3 CNC A 1 701 701 CNC CNC . G 4 C8E A 1 800 800 C8E C8E . H 4 C8E A 1 801 801 C8E C8E . I 4 C8E A 1 802 802 C8E C8E . J 4 C8E A 1 803 803 C8E C8E . K 4 C8E A 1 804 804 C8E C8E . L 4 C8E A 1 805 805 C8E C8E . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 C8E . . . J 4 13.024 55.569 42.557 1 69.65 ? C1 C8E 803 A 1 HETATM 2 C C2 C8E . . . J 4 13.137 56.65 41.466 1 69.21 ? C2 C8E 803 A 1 HETATM 3 C C3 C8E . . . J 4 12.183 57.809 41.788 1 69 ? C3 C8E 803 A 1 HETATM 4 C C4 C8E . . . J 4 12.549 59.111 41.086 1 61.73 ? C4 C8E 803 A 1 HETATM 5 C C5 C8E . . . J 4 12.505 58.802 39.612 1 56.78 ? C5 C8E 803 A 1 HETATM 6 C C6 C8E . . . J 4 12.42 60.102 38.837 1 50.52 ? C6 C8E 803 A 1 HETATM 7 C C7 C8E . . . J 4 13.353 61.086 39.455 1 45.75 ? C7 C8E 803 A 1 HETATM 8 C C8 C8E . . . J 4 13.757 62.003 38.344 1 48.29 ? C8 C8E 803 A 1 HETATM 9 O O9 C8E . . . J 4 14.384 63.071 38.982 1 56 ? O9 C8E 803 A 1 HETATM 10 C C10 C8E . . . J 4 13.991 63.072 40.329 1 64.77 ? C10 C8E 803 A 1 HETATM 11 C C11 C8E . . . J 4 15.123 63.779 41.046 1 70.84 ? C11 C8E 803 A 1 HETATM 12 O O12 C8E . . . J 4 15.052 65.189 40.901 1 69.1 ? O12 C8E 803 A 1 HETATM 13 C C13 C8E . . . J 4 14.723 65.835 42.147 1 72.86 ? C13 C8E 803 A 1 HETATM 14 C C14 C8E . . . J 4 14.694 64.916 43.408 1 70.04 ? C14 C8E 803 A 1 HETATM 15 O O15 C8E . . . J 4 13.61 65.142 44.326 1 65.05 ? O15 C8E 803 A 1 HETATM 16 C C16 C8E . . . J 4 12.5 64.289 44.128 1 61.56 ? C16 C8E 803 A 1 HETATM 17 C C17 C8E . . . J 4 12.836 63.047 43.282 1 62.76 ? C17 C8E 803 A 1 HETATM 18 O O18 C8E . . . J 4 11.675 62.325 42.874 1 68.68 ? O18 C8E 803 A 1 HETATM 19 C C19 C8E . . . J 4 10.662 61.958 43.817 1 56.59 ? C19 C8E 803 A 1 HETATM 20 C C20 C8E . . . J 4 9.688 61.129 42.984 1 64 ? C20 C8E 803 A 1 HETATM 21 O O21 C8E . . . J 4 8.58 60.631 43.717 1 74.43 ? O21 C8E 803 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 346 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 21 #