data_1NT1 # _model_server_result.job_id pwHkQHZDFstSu5003VaNjg _model_server_result.datetime_utc '2024-12-27 00:33:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1nt1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":247}' # _entry.id 1NT1 # _exptl.entry_id 1NT1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 505.006 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (6R,21AS)-17-CHLORO-6-CYCLOHEXYL-2,3,6,7,10,11,19,20-OCTAHYDRO-1H,5H-PYRROLO[1,2-K][1,4,8,11,14]BENZOXATETRAAZA-CYCLOHEPTADECINE-5,8,12,21(9H,13H,21AH)-TETRONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.9 _cell.angle_gamma 90 _cell.entry_id 1NT1 _cell.length_a 71.1 _cell.length_b 72.1 _cell.length_c 73.2 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NT1 _symmetry.cell_setting monoclinic _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 2 A CYS 1 1_555 A SG CYS 148 A CYS 122 1_555 A ? ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf2 A SG CYS 57 A CYS 42 1_555 A SG CYS 73 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf3 A SG CYS 202 A CYS 168 1_555 A SG CYS 216 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf4 A SG CYS 230 A CYS 191 1_555 A SG CYS 260 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? covale ? covale1 B C ALA 8 H ALA 362 1_555 B N TYS 9 H TYS 363 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale2 B C TYS 9 H TYS 363 1_555 B N LEU 10 H LEU 364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C25 H33 Cl N4 O5' _chem_comp.formula_weight 505.006 _chem_comp.id T76 _chem_comp.mon_nstd_flag . _chem_comp.name (6R,21AS)-17-CHLORO-6-CYCLOHEXYL-2,3,6,7,10,11,19,20-OCTAHYDRO-1H,5H-PYRROLO[1,2-K][1,4,8,11,14]BENZOXATETRAAZA-CYCLOHEPTADECINE-5,8,12,21(9H,13H,21AH)-TETRONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 T76 doub 290 n y C1 C6 T76 sing 291 n y C1 C7 T76 sing 292 n n C2 C3 T76 sing 293 n y C2 O12 T76 sing 294 n n C3 C4 T76 doub 295 n y C3 H3 T76 sing 296 n n C4 C5 T76 sing 297 n y C4 H4 T76 sing 298 n n C5 C6 T76 doub 299 n y C5 CL68 T76 sing 300 n n C6 H6 T76 sing 301 n n C7 N8 T76 sing 302 n n C7 H71 T76 sing 303 n n C7 H72 T76 sing 304 n n N8 C9 T76 sing 305 n n N8 H8 T76 sing 306 n n C9 C10 T76 sing 307 n n C9 O11 T76 doub 308 n n C10 C18 T76 sing 309 n n C10 N21 T76 sing 310 n n C10 H10 T76 sing 311 n n O12 C43 T76 sing 312 n n C18 C19 T76 sing 313 n n C18 H181 T76 sing 314 n n C18 H182 T76 sing 315 n n C19 C20 T76 sing 316 n n C19 H191 T76 sing 317 n n C19 H192 T76 sing 318 n n C20 N21 T76 sing 319 n n C20 H201 T76 sing 320 n n C20 H202 T76 sing 321 n n N21 C29 T76 sing 322 n n C29 C30 T76 sing 323 n n C29 O44 T76 doub 324 n n C30 N31 T76 sing 325 n n C30 C45 T76 sing 326 n n C30 H30 T76 sing 327 n n N31 C32 T76 sing 328 n n N31 H31 T76 sing 329 n n C32 O33 T76 doub 330 n n C32 C34 T76 sing 331 n n C34 C35 T76 sing 332 n n C34 H341 T76 sing 333 n n C34 H342 T76 sing 334 n n C35 N38 T76 sing 335 n n C35 H351 T76 sing 336 n n C35 H352 T76 sing 337 n n N38 C41 T76 sing 338 n n N38 H38 T76 sing 339 n n C41 O42 T76 doub 340 n n C41 C43 T76 sing 341 n n C43 H431 T76 sing 342 n n C43 H432 T76 sing 343 n n C45 C47 T76 sing 344 n n C45 C51 T76 sing 345 n n C45 H45 T76 sing 346 n n C47 C48 T76 sing 347 n n C47 H471 T76 sing 348 n n C47 H472 T76 sing 349 n n C48 C49 T76 sing 350 n n C48 H481 T76 sing 351 n n C48 H482 T76 sing 352 n n C49 C50 T76 sing 353 n n C49 H491 T76 sing 354 n n C49 H492 T76 sing 355 n n C50 C51 T76 sing 356 n n C50 H501 T76 sing 357 n n C50 H502 T76 sing 358 n n C51 H511 T76 sing 359 n n C51 H512 T76 sing 360 n n # _atom_sites.entry_id 1NT1 _atom_sites.fract_transf_matrix[1][1] 0.014065 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002708 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01387 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013912 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 T76 A 1 247 1 T76 T76 . D 4 HOH A 1 602 602 HOH HOH . D 4 HOH A 2 603 603 HOH HOH . D 4 HOH A 3 604 604 HOH HOH . D 4 HOH A 4 605 605 HOH HOH . D 4 HOH A 5 606 606 HOH HOH . D 4 HOH A 6 607 607 HOH HOH . D 4 HOH A 7 608 608 HOH HOH . D 4 HOH A 8 609 609 HOH HOH . D 4 HOH A 9 610 610 HOH HOH . D 4 HOH A 10 611 611 HOH HOH . D 4 HOH A 11 612 612 HOH HOH . D 4 HOH A 12 613 613 HOH HOH . D 4 HOH A 13 614 614 HOH HOH . D 4 HOH A 14 615 615 HOH HOH . D 4 HOH A 15 616 616 HOH HOH . D 4 HOH A 16 617 617 HOH HOH . D 4 HOH A 17 618 618 HOH HOH . D 4 HOH A 18 619 619 HOH HOH . D 4 HOH A 19 620 620 HOH HOH . D 4 HOH A 20 621 621 HOH HOH . D 4 HOH A 21 622 622 HOH HOH . D 4 HOH A 22 623 623 HOH HOH . D 4 HOH A 23 624 624 HOH HOH . D 4 HOH A 24 625 625 HOH HOH . D 4 HOH A 25 626 626 HOH HOH . D 4 HOH A 26 627 627 HOH HOH . D 4 HOH A 27 628 628 HOH HOH . D 4 HOH A 28 629 629 HOH HOH . D 4 HOH A 29 630 630 HOH HOH . D 4 HOH A 30 631 631 HOH HOH . D 4 HOH A 31 632 632 HOH HOH . D 4 HOH A 32 633 633 HOH HOH . D 4 HOH A 33 634 634 HOH HOH . D 4 HOH A 34 635 635 HOH HOH . D 4 HOH A 35 636 636 HOH HOH . D 4 HOH A 36 637 637 HOH HOH . D 4 HOH A 37 638 638 HOH HOH . D 4 HOH A 38 639 639 HOH HOH . D 4 HOH A 39 641 641 HOH HOH . D 4 HOH A 40 644 644 HOH HOH . D 4 HOH A 41 645 645 HOH HOH . D 4 HOH A 42 646 646 HOH HOH . D 4 HOH A 43 648 648 HOH HOH . D 4 HOH A 44 649 649 HOH HOH . D 4 HOH A 45 650 650 HOH HOH . D 4 HOH A 46 652 652 HOH HOH . D 4 HOH A 47 653 653 HOH HOH . D 4 HOH A 48 654 654 HOH HOH . D 4 HOH A 49 657 657 HOH HOH . D 4 HOH A 50 658 658 HOH HOH . D 4 HOH A 51 660 660 HOH HOH . D 4 HOH A 52 661 661 HOH HOH . D 4 HOH A 53 662 662 HOH HOH . D 4 HOH A 54 663 663 HOH HOH . D 4 HOH A 55 664 664 HOH HOH . D 4 HOH A 56 666 666 HOH HOH . D 4 HOH A 57 672 672 HOH HOH . D 4 HOH A 58 675 675 HOH HOH . D 4 HOH A 59 677 677 HOH HOH . D 4 HOH A 60 678 678 HOH HOH . D 4 HOH A 61 680 680 HOH HOH . D 4 HOH A 62 681 681 HOH HOH . D 4 HOH A 63 683 683 HOH HOH . D 4 HOH A 64 689 689 HOH HOH . D 4 HOH A 65 690 690 HOH HOH . D 4 HOH A 66 691 691 HOH HOH . D 4 HOH A 67 693 693 HOH HOH . D 4 HOH A 68 701 701 HOH HOH . D 4 HOH A 69 703 703 HOH HOH . D 4 HOH A 70 705 705 HOH HOH . D 4 HOH A 71 706 706 HOH HOH . D 4 HOH A 72 708 708 HOH HOH . D 4 HOH A 73 709 709 HOH HOH . D 4 HOH A 74 711 711 HOH HOH . D 4 HOH A 75 714 714 HOH HOH . D 4 HOH A 76 721 721 HOH HOH . D 4 HOH A 77 726 726 HOH HOH . D 4 HOH A 78 728 728 HOH HOH . D 4 HOH A 79 729 729 HOH HOH . D 4 HOH A 80 732 732 HOH HOH . D 4 HOH A 81 735 735 HOH HOH . D 4 HOH A 82 741 741 HOH HOH . D 4 HOH A 83 745 745 HOH HOH . D 4 HOH A 84 746 746 HOH HOH . D 4 HOH A 85 753 753 HOH HOH . D 4 HOH A 86 755 755 HOH HOH . D 4 HOH A 87 759 759 HOH HOH . D 4 HOH A 88 760 760 HOH HOH . D 4 HOH A 89 765 765 HOH HOH . D 4 HOH A 90 766 766 HOH HOH . D 4 HOH A 91 770 770 HOH HOH . D 4 HOH A 92 772 772 HOH HOH . D 4 HOH A 93 773 773 HOH HOH . D 4 HOH A 94 779 779 HOH HOH . D 4 HOH A 95 785 785 HOH HOH . D 4 HOH A 96 786 786 HOH HOH . D 4 HOH A 97 790 790 HOH HOH . D 4 HOH A 98 791 791 HOH HOH . D 4 HOH A 99 792 792 HOH HOH . D 4 HOH A 100 794 794 HOH HOH . D 4 HOH A 101 795 795 HOH HOH . D 4 HOH A 102 796 796 HOH HOH . D 4 HOH A 103 802 802 HOH HOH . D 4 HOH A 104 806 806 HOH HOH . D 4 HOH A 105 808 808 HOH HOH . D 4 HOH A 106 813 813 HOH HOH . D 4 HOH A 107 814 814 HOH HOH . D 4 HOH A 108 818 818 HOH HOH . D 4 HOH A 109 820 820 HOH HOH . D 4 HOH A 110 851 851 HOH HOH . D 4 HOH A 111 864 864 HOH HOH . D 4 HOH A 112 874 874 HOH HOH . D 4 HOH A 113 875 875 HOH HOH . D 4 HOH A 114 888 888 HOH HOH . D 4 HOH A 115 889 889 HOH HOH . D 4 HOH A 116 891 891 HOH HOH . D 4 HOH A 117 892 892 HOH HOH . D 4 HOH A 118 893 893 HOH HOH . D 4 HOH A 119 896 896 HOH HOH . D 4 HOH A 120 901 901 HOH HOH . D 4 HOH A 121 914 914 HOH HOH . D 4 HOH A 122 915 915 HOH HOH . D 4 HOH A 123 916 916 HOH HOH . D 4 HOH A 124 917 917 HOH HOH . D 4 HOH A 125 918 918 HOH HOH . D 4 HOH A 126 920 920 HOH HOH . D 4 HOH A 127 923 923 HOH HOH . D 4 HOH A 128 924 924 HOH HOH . D 4 HOH A 129 925 925 HOH HOH . D 4 HOH A 130 926 926 HOH HOH . D 4 HOH A 131 927 927 HOH HOH . D 4 HOH A 132 928 928 HOH HOH . D 4 HOH A 133 930 930 HOH HOH . D 4 HOH A 134 931 931 HOH HOH . D 4 HOH A 135 932 932 HOH HOH . D 4 HOH A 136 933 933 HOH HOH . D 4 HOH A 137 934 934 HOH HOH . D 4 HOH A 138 935 935 HOH HOH . D 4 HOH A 139 937 937 HOH HOH . D 4 HOH A 140 941 941 HOH HOH . D 4 HOH A 141 942 942 HOH HOH . E 4 HOH H 1 671 671 HOH HOH . E 4 HOH H 2 762 762 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 T76 . . . C 3 13.305 -11.346 21.939 1 30.13 ? C1 T76 247 A 1 HETATM 2 C C2 T76 . . . C 3 12.61 -12.475 22.329 1 32.97 ? C2 T76 247 A 1 HETATM 3 C C3 T76 . . . C 3 11.661 -12.416 23.387 1 30.83 ? C3 T76 247 A 1 HETATM 4 C C4 T76 . . . C 3 11.49 -11.23 24.102 1 28.54 ? C4 T76 247 A 1 HETATM 5 C C5 T76 . . . C 3 12.281 -10.12 23.782 1 29.61 ? C5 T76 247 A 1 HETATM 6 C C6 T76 . . . C 3 13.173 -10.161 22.68 1 30.27 ? C6 T76 247 A 1 HETATM 7 C C7 T76 . . . C 3 14.144 -11.385 20.684 1 27.95 ? C7 T76 247 A 1 HETATM 8 N N8 T76 . . . C 3 15.583 -11.523 20.948 1 30.47 ? N8 T76 247 A 1 HETATM 9 C C9 T76 . . . C 3 16.192 -12.705 20.664 1 31.22 ? C9 T76 247 A 1 HETATM 10 C C10 T76 . . . C 3 17.688 -12.724 20.898 1 31.65 ? C10 T76 247 A 1 HETATM 11 O O11 T76 . . . C 3 15.62 -13.745 20.322 1 32.75 ? O11 T76 247 A 1 HETATM 12 O O12 T76 . . . C 3 12.914 -13.687 21.705 1 33.95 ? O12 T76 247 A 1 HETATM 13 C C18 T76 . . . C 3 18.44 -12.877 19.563 1 30.62 ? C18 T76 247 A 1 HETATM 14 C C19 T76 . . . C 3 19.764 -13.555 19.939 1 31.83 ? C19 T76 247 A 1 HETATM 15 C C20 T76 . . . C 3 19.263 -14.592 20.951 1 31.63 ? C20 T76 247 A 1 HETATM 16 N N21 T76 . . . C 3 18.111 -13.959 21.571 1 29.48 ? N21 T76 247 A 1 HETATM 17 C C29 T76 . . . C 3 17.445 -14.392 22.669 1 28.86 ? C29 T76 247 A 1 HETATM 18 C C30 T76 . . . C 3 17.941 -15.711 23.237 1 30.36 ? C30 T76 247 A 1 HETATM 19 N N31 T76 . . . C 3 16.825 -16.657 23.288 1 31.08 ? N31 T76 247 A 1 HETATM 20 C C32 T76 . . . C 3 16.622 -17.381 22.157 1 34.11 ? C32 T76 247 A 1 HETATM 21 O O33 T76 . . . C 3 17.444 -17.482 21.225 1 33.53 ? O33 T76 247 A 1 HETATM 22 C C34 T76 . . . C 3 15.233 -17.995 22.063 1 34.06 ? C34 T76 247 A 1 HETATM 23 C C35 T76 . . . C 3 14.469 -17.311 20.913 1 34.78 ? C35 T76 247 A 1 HETATM 24 N N38 T76 . . . C 3 13.929 -15.992 21.31 1 34.88 ? N38 T76 247 A 1 HETATM 25 C C41 T76 . . . C 3 12.7 -16.043 21.869 1 33.92 ? C41 T76 247 A 1 HETATM 26 O O42 T76 . . . C 3 12.052 -17.077 22.03 1 35.56 ? O42 T76 247 A 1 HETATM 27 C C43 T76 . . . C 3 12.163 -14.715 22.309 1 33.68 ? C43 T76 247 A 1 HETATM 28 O O44 T76 . . . C 3 16.431 -13.852 23.132 1 27.44 ? O44 T76 247 A 1 HETATM 29 C C45 T76 . . . C 3 18.529 -15.453 24.639 1 29 ? C45 T76 247 A 1 HETATM 30 C C47 T76 . . . C 3 18.796 -16.753 25.406 1 28.45 ? C47 T76 247 A 1 HETATM 31 C C48 T76 . . . C 3 19.401 -16.453 26.788 1 27.7 ? C48 T76 247 A 1 HETATM 32 C C49 T76 . . . C 3 20.698 -15.642 26.628 1 27.41 ? C49 T76 247 A 1 HETATM 33 C C50 T76 . . . C 3 20.421 -14.33 25.883 1 28.58 ? C50 T76 247 A 1 HETATM 34 C C51 T76 . . . C 3 19.808 -14.621 24.514 1 25.48 ? C51 T76 247 A 1 HETATM 35 CL CL68 T76 . . . C 3 12.186 -8.705 24.785 1 27.51 ? CL68 T76 247 A 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 35 #