data_1NU1 # _model_server_result.job_id HrJv-9LZ-1qvR5NBozewKw _model_server_result.datetime_utc '2024-11-21 14:35:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1nu1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":383}' # _entry.id 1NU1 # _exptl.entry_id 1NU1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 287.397 _entity.id 13 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-NONYL-4-HYDROXYQUINOLINE N-OXIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1NU1 _cell.length_a 153.842 _cell.length_b 153.842 _cell.length_c 590.374 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NU1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details 22-meric _pdbx_struct_assembly.oligomeric_count 22 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 153.842 153.842 0 # _struct_asym.details ? _struct_asym.entity_id 13 _struct_asym.id N _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 E SG CYS 144 E CYS 144 1_555 E SG CYS 160 E CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 H SG CYS 24 H CYS 24 1_555 H SG CYS 68 H CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? metalc ? metalc1 C NE2 HIS 83 C HIS 83 1_555 L FE HEM . C HEM 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc2 C NE2 HIS 97 C HIS 97 1_555 M FE HEM . C HEM 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc3 C NE2 HIS 182 C HIS 182 1_555 L FE HEM . C HEM 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc4 C NE2 HIS 196 C HIS 196 1_555 M FE HEM . C HEM 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? metalc ? metalc5 D NE2 HIS 41 D HIS 41 1_555 O FE HEM . D HEM 242 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc6 D SD MET 160 D MET 160 1_555 O FE HEM . D HEM 242 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.114 ? metalc ? metalc7 E SG CYS 139 E CYS 139 1_555 P FE1 FES . E FES 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.746 ? metalc ? metalc8 E ND1 HIS 141 E HIS 141 1_555 P FE2 FES . E FES 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc9 E SG CYS 158 E CYS 158 1_555 P FE1 FES . E FES 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? metalc ? metalc10 E ND1 HIS 161 E HIS 161 1_555 P FE2 FES . E FES 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? # _chem_comp.formula 'C18 H25 N O2' _chem_comp.formula_weight 287.397 _chem_comp.id QNO _chem_comp.mon_nstd_flag . _chem_comp.name '2-NONYL-4-HYDROXYQUINOLINE N-OXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C29 C28 QNO sing 363 n n C29 H291 QNO sing 364 n n C29 H292 QNO sing 365 n n C29 H293 QNO sing 366 n n C28 C27 QNO sing 367 n n C28 H281 QNO sing 368 n n C28 H282 QNO sing 369 n n C27 C26 QNO sing 370 n n C27 H271 QNO sing 371 n n C27 H272 QNO sing 372 n n C26 C25 QNO sing 373 n n C26 H261 QNO sing 374 n n C26 H262 QNO sing 375 n n C25 C24 QNO sing 376 n n C25 H251 QNO sing 377 n n C25 H252 QNO sing 378 n n C24 C23 QNO sing 379 n n C24 H241 QNO sing 380 n n C24 H242 QNO sing 381 n n C23 C22 QNO sing 382 n n C23 H231 QNO sing 383 n n C23 H232 QNO sing 384 n n C22 C21 QNO sing 385 n n C22 H221 QNO sing 386 n n C22 H222 QNO sing 387 n n C21 C2 QNO sing 388 n n C21 H211 QNO sing 389 n n C21 H212 QNO sing 390 n n C2 C3 QNO sing 391 n y C2 N1 QNO doub 392 n y C3 C4 QNO doub 393 n y C3 H3 QNO sing 394 n n C4 O41 QNO sing 395 n n C4 C5 QNO sing 396 n y O41 H41 QNO sing 397 n n C5 C51 QNO doub 398 n y C5 C6 QNO sing 399 n y C51 C52 QNO sing 400 n y C51 H51 QNO sing 401 n n C52 C62 QNO doub 402 n y C52 H52 QNO sing 403 n n C62 C61 QNO sing 404 n y C62 H62 QNO sing 405 n n C61 C6 QNO doub 406 n y C61 H61 QNO sing 407 n n C6 N1 QNO sing 408 n y N1 OH QNO sing 409 n n # _atom_sites.entry_id 1NU1 _atom_sites.fract_transf_matrix[1][1] 0.0065 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0065 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.001694 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code L 12 HEM C 1 381 381 HEM HEM . M 12 HEM C 1 382 382 HEM HEM . N 13 QNO C 1 383 102 QNO QNO . O 12 HEM D 1 242 242 HEM HEM . P 14 FES E 1 200 200 FES FES . Q 15 HOH C 1 1010 1010 HOH HOH . Q 15 HOH C 2 1029 1029 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C29 QNO . . . N 13 59.311 76.461 147.517 1 67.54 ? C29 QNO 383 C 1 HETATM 2 C C28 QNO . . . N 13 60.762 75.982 147.45 1 66.75 ? C28 QNO 383 C 1 HETATM 3 C C27 QNO . . . N 13 60.956 75.015 146.282 1 73.32 ? C27 QNO 383 C 1 HETATM 4 C C26 QNO . . . N 13 61.762 73.785 146.715 1 73.33 ? C26 QNO 383 C 1 HETATM 5 C C25 QNO . . . N 13 62.617 73.183 145.594 1 67.67 ? C25 QNO 383 C 1 HETATM 6 C C24 QNO . . . N 13 62.427 73.918 144.263 1 65.41 ? C24 QNO 383 C 1 HETATM 7 C C23 QNO . . . N 13 61.946 72.95 143.191 1 54.24 ? C23 QNO 383 C 1 HETATM 8 C C22 QNO . . . N 13 63.09 72.496 142.289 1 43.76 ? C22 QNO 383 C 1 HETATM 9 C C21 QNO . . . N 13 63.351 70.997 142.346 1 39.09 ? C21 QNO 383 C 1 HETATM 10 C C2 QNO . . . N 13 62.693 70.229 141.215 1 36.65 ? C2 QNO 383 C 1 HETATM 11 C C3 QNO . . . N 13 63.497 69.548 140.323 1 28.24 ? C3 QNO 383 C 1 HETATM 12 C C4 QNO . . . N 13 62.957 68.846 139.276 1 39.12 ? C4 QNO 383 C 1 HETATM 13 O O41 QNO . . . N 13 63.682 68.271 138.436 1 51.52 ? O41 QNO 383 C 1 HETATM 14 C C5 QNO . . . N 13 61.507 68.785 139.173 1 43.2 ? C5 QNO 383 C 1 HETATM 15 C C51 QNO . . . N 13 60.877 68.078 138.17 1 50.6 ? C51 QNO 383 C 1 HETATM 16 C C52 QNO . . . N 13 59.5 68.081 138.122 1 50.05 ? C52 QNO 383 C 1 HETATM 17 C C62 QNO . . . N 13 58.759 68.738 139.088 1 49.69 ? C62 QNO 383 C 1 HETATM 18 C C61 QNO . . . N 13 59.365 69.423 140.126 1 48.74 ? C61 QNO 383 C 1 HETATM 19 C C6 QNO . . . N 13 60.738 69.479 140.19 1 40.55 ? C6 QNO 383 C 1 HETATM 20 N N1 QNO . . . N 13 61.356 70.179 141.137 1 38.11 ? N1 QNO 383 C 1 HETATM 21 O OH QNO . . . N 13 60.674 70.77 141.989 1 24.43 ? OH QNO 383 C 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 39 _model_server_stats.query_time_ms 410 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 21 #