data_1NVG # _model_server_result.job_id Smdrmq8KtbxtBEvtXWjf2A _model_server_result.datetime_utc '2024-10-18 17:17:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1nvg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":500}' # _entry.id 1NVG # _exptl.entry_id 1NVG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1NVG _cell.length_a 125.396 _cell.length_b 125.396 _cell.length_c 117.186 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NVG _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 -y,-x,-z 0 -1 0 -1 0 0 0 0 -1 0 0 0 3 'crystal symmetry operation' 15_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 4 'crystal symmetry operation' 10_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 38 A CYS 38 1_555 C ZN ZN . A ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc2 A NE2 HIS 68 A HIS 68 1_555 C ZN ZN . A ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc3 A OE2 GLU 69 A GLU 69 1_555 C ZN ZN . A ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc4 A OE2 GLU 98 A GLU 98 1_555 B ZN ZN . A ZN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc5 A SG CYS 101 A CYS 101 1_555 B ZN ZN . A ZN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? metalc ? metalc6 A SG CYS 104 A CYS 104 1_555 B ZN ZN . A ZN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? metalc ? metalc7 A SG CYS 112 A CYS 112 1_555 B ZN ZN . A ZN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc8 A SG CYS 154 A CYS 154 1_555 C ZN ZN . A ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1NVG _atom_sites.fract_transf_matrix[1][1] 0.007975 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007975 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008533 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 400 400 ZN ZN . C 2 ZN A 1 500 500 ZN ZN . D 3 HOH A 1 501 1 HOH HOH . D 3 HOH A 2 502 2 HOH HOH . D 3 HOH A 3 503 3 HOH HOH . D 3 HOH A 4 504 4 HOH HOH . D 3 HOH A 5 505 5 HOH HOH . D 3 HOH A 6 506 6 HOH HOH . D 3 HOH A 7 507 7 HOH HOH . D 3 HOH A 8 508 8 HOH HOH . D 3 HOH A 9 509 9 HOH HOH . D 3 HOH A 10 510 10 HOH HOH . D 3 HOH A 11 511 11 HOH HOH . D 3 HOH A 12 512 12 HOH HOH . D 3 HOH A 13 513 13 HOH HOH . D 3 HOH A 14 514 14 HOH HOH . D 3 HOH A 15 515 15 HOH HOH . D 3 HOH A 16 516 16 HOH HOH . D 3 HOH A 17 517 17 HOH HOH . D 3 HOH A 18 518 18 HOH HOH . D 3 HOH A 19 519 19 HOH HOH . D 3 HOH A 20 520 20 HOH HOH . D 3 HOH A 21 521 21 HOH HOH . D 3 HOH A 22 522 22 HOH HOH . D 3 HOH A 23 523 23 HOH HOH . D 3 HOH A 24 524 24 HOH HOH . D 3 HOH A 25 525 25 HOH HOH . D 3 HOH A 26 526 26 HOH HOH . D 3 HOH A 27 527 27 HOH HOH . D 3 HOH A 28 528 28 HOH HOH . D 3 HOH A 29 529 29 HOH HOH . D 3 HOH A 30 530 30 HOH HOH . D 3 HOH A 31 531 31 HOH HOH . D 3 HOH A 32 532 32 HOH HOH . D 3 HOH A 33 533 33 HOH HOH . D 3 HOH A 34 534 34 HOH HOH . D 3 HOH A 35 535 35 HOH HOH . D 3 HOH A 36 536 36 HOH HOH . D 3 HOH A 37 537 37 HOH HOH . D 3 HOH A 38 538 38 HOH HOH . D 3 HOH A 39 539 39 HOH HOH . D 3 HOH A 40 540 40 HOH HOH . D 3 HOH A 41 541 41 HOH HOH . D 3 HOH A 42 542 42 HOH HOH . D 3 HOH A 43 543 43 HOH HOH . D 3 HOH A 44 544 44 HOH HOH . D 3 HOH A 45 545 45 HOH HOH . D 3 HOH A 46 546 46 HOH HOH . D 3 HOH A 47 547 47 HOH HOH . D 3 HOH A 48 548 48 HOH HOH . D 3 HOH A 49 549 49 HOH HOH . D 3 HOH A 50 550 50 HOH HOH . D 3 HOH A 51 551 51 HOH HOH . D 3 HOH A 52 552 52 HOH HOH . D 3 HOH A 53 553 53 HOH HOH . D 3 HOH A 54 554 54 HOH HOH . D 3 HOH A 55 555 55 HOH HOH . D 3 HOH A 56 556 56 HOH HOH . D 3 HOH A 57 557 57 HOH HOH . D 3 HOH A 58 558 58 HOH HOH . D 3 HOH A 59 559 59 HOH HOH . D 3 HOH A 60 560 60 HOH HOH . D 3 HOH A 61 561 61 HOH HOH . D 3 HOH A 62 562 62 HOH HOH . D 3 HOH A 63 563 63 HOH HOH . D 3 HOH A 64 564 64 HOH HOH . D 3 HOH A 65 565 65 HOH HOH . D 3 HOH A 66 566 66 HOH HOH . D 3 HOH A 67 567 67 HOH HOH . D 3 HOH A 68 568 68 HOH HOH . D 3 HOH A 69 569 69 HOH HOH . D 3 HOH A 70 570 70 HOH HOH . D 3 HOH A 71 571 71 HOH HOH . D 3 HOH A 72 572 72 HOH HOH . D 3 HOH A 73 573 73 HOH HOH . D 3 HOH A 74 574 74 HOH HOH . D 3 HOH A 75 575 75 HOH HOH . D 3 HOH A 76 576 76 HOH HOH . D 3 HOH A 77 577 77 HOH HOH . D 3 HOH A 78 578 78 HOH HOH . D 3 HOH A 79 579 79 HOH HOH . D 3 HOH A 80 580 80 HOH HOH . D 3 HOH A 81 581 81 HOH HOH . D 3 HOH A 82 582 82 HOH HOH . D 3 HOH A 83 583 83 HOH HOH . D 3 HOH A 84 584 84 HOH HOH . D 3 HOH A 85 585 85 HOH HOH . D 3 HOH A 86 586 86 HOH HOH . D 3 HOH A 87 587 87 HOH HOH . D 3 HOH A 88 588 88 HOH HOH . D 3 HOH A 89 589 89 HOH HOH . D 3 HOH A 90 590 90 HOH HOH . D 3 HOH A 91 591 91 HOH HOH . D 3 HOH A 92 592 92 HOH HOH . D 3 HOH A 93 593 93 HOH HOH . D 3 HOH A 94 594 94 HOH HOH . D 3 HOH A 95 595 95 HOH HOH . D 3 HOH A 96 596 96 HOH HOH . D 3 HOH A 97 597 97 HOH HOH . D 3 HOH A 98 598 98 HOH HOH . D 3 HOH A 99 599 99 HOH HOH . D 3 HOH A 100 600 100 HOH HOH . D 3 HOH A 101 601 101 HOH HOH . D 3 HOH A 102 602 102 HOH HOH . D 3 HOH A 103 603 103 HOH HOH . D 3 HOH A 104 604 104 HOH HOH . D 3 HOH A 105 605 105 HOH HOH . D 3 HOH A 106 606 106 HOH HOH . D 3 HOH A 107 607 107 HOH HOH . D 3 HOH A 108 608 108 HOH HOH . D 3 HOH A 109 609 109 HOH HOH . D 3 HOH A 110 610 110 HOH HOH . D 3 HOH A 111 611 111 HOH HOH . D 3 HOH A 112 612 112 HOH HOH . D 3 HOH A 113 613 113 HOH HOH . D 3 HOH A 114 614 114 HOH HOH . D 3 HOH A 115 615 115 HOH HOH . D 3 HOH A 116 616 116 HOH HOH . D 3 HOH A 117 617 117 HOH HOH . D 3 HOH A 118 618 118 HOH HOH . D 3 HOH A 119 619 119 HOH HOH . D 3 HOH A 120 620 120 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 25.167 _atom_site.Cartn_y 1.821 _atom_site.Cartn_z 15.677 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 35.63 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 500 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 84 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #