data_1NVW
#
_model_server_result.job_id            2hskjdxYBGT16iFM9F8HfQ 
_model_server_result.datetime_utc      '2024-11-22 22:08:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1nvw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":1047}' 
#
_entry.id    1NVW 
#
_exptl.entry_id    1NVW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              94.971 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHATE ION' 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1NVW 
_cell.length_a            184.046 
_cell.length_b            184.046 
_cell.length_c            178.943 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1NVW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        97 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'I 4 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA trimeric 3 author_and_software_defined_assembly 1 
PISA 24-meric 24 software_defined_assembly 2 
PISA dodecameric 12 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 1 1 
A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 2 1,2,3,4,5,6,7,8 
A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 3 1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 
3 'crystal symmetry operation' 3_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 
4 'crystal symmetry operation' 4_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 
5 'crystal symmetry operation' 5_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 0 0 178.943 
6 'crystal symmetry operation' 6_556 x,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 178.943 
7 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 178.943 
8 'crystal symmetry operation' 8_556 -y,-x,-z+1 0 -1 0 -1 0 0 0 0 -1 0 0 178.943 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 F N N 
? 4 H N N 
? 4 I N N 
? 4 J N N 
? 4 K N N 
? 4 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG SER 17 Q SER 17 1_555 D MG MG . Q MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? 
metalc ? metalc2 A OG1 THR 35 Q THR 35 1_555 D MG MG . Q MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? 
metalc ? metalc3 G O2G GNP . Q GNP 1001 1_555 D MG MG . Q MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? 
metalc ? metalc4 G O2B GNP . Q GNP 1001 1_555 D MG MG . Q MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? 
metalc ? metalc5 D MG MG . Q MG 1002 1_555 M O HOH . Q HOH 1010 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? 
#
_chem_comp.formula           'O4 P -3' 
_chem_comp.formula_weight    94.971 
_chem_comp.id                PO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1 PO4 doub 311 n n 
P O2 PO4 sing 312 n n 
P O3 PO4 sing 313 n n 
P O4 PO4 sing 314 n n 
#
_atom_sites.entry_id                     1NVW 
_atom_sites.fract_transf_matrix[1][1]    0.005433 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005433 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005588 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 3 MG Q 1 1002 2 MG MG . 
E 4 PO4 Q 1 1008 8 PO4 PO4 . 
F 4 PO4 Q 1 1009 9 PO4 PO4 . 
G 5 GNP Q 1 1001 1 GNP GNP . 
H 4 PO4 R 1 1003 3 PO4 PO4 . 
I 4 PO4 S 1 1047 4 PO4 PO4 . 
J 4 PO4 S 1 1048 5 PO4 PO4 . 
K 4 PO4 S 1 1049 6 PO4 PO4 . 
L 4 PO4 S 1 1050 7 PO4 PO4 . 
M 6 HOH Q 1 1010 1 HOH HOH . 
M 6 HOH Q 2 1011 7 HOH HOH . 
M 6 HOH Q 3 1012 25 HOH HOH . 
M 6 HOH Q 4 1013 29 HOH HOH . 
M 6 HOH Q 5 1014 40 HOH HOH . 
M 6 HOH Q 6 1015 44 HOH HOH . 
M 6 HOH Q 7 1016 51 HOH HOH . 
M 6 HOH Q 8 1017 54 HOH HOH . 
N 6 HOH R 1 1004 2 HOH HOH . 
N 6 HOH R 2 1005 11 HOH HOH . 
N 6 HOH R 3 1006 17 HOH HOH . 
N 6 HOH R 4 1007 20 HOH HOH . 
N 6 HOH R 5 1008 22 HOH HOH . 
N 6 HOH R 6 1009 28 HOH HOH . 
N 6 HOH R 7 1010 42 HOH HOH . 
N 6 HOH R 8 1011 43 HOH HOH . 
N 6 HOH R 9 1012 45 HOH HOH . 
N 6 HOH R 10 1013 52 HOH HOH . 
O 6 HOH S 1 3 3 HOH HOH . 
O 6 HOH S 2 4 4 HOH HOH . 
O 6 HOH S 3 5 5 HOH HOH . 
O 6 HOH S 4 6 6 HOH HOH . 
O 6 HOH S 5 8 8 HOH HOH . 
O 6 HOH S 6 9 9 HOH HOH . 
O 6 HOH S 7 10 10 HOH HOH . 
O 6 HOH S 8 12 12 HOH HOH . 
O 6 HOH S 9 13 13 HOH HOH . 
O 6 HOH S 10 14 14 HOH HOH . 
O 6 HOH S 11 15 15 HOH HOH . 
O 6 HOH S 12 16 16 HOH HOH . 
O 6 HOH S 13 18 18 HOH HOH . 
O 6 HOH S 14 19 19 HOH HOH . 
O 6 HOH S 15 21 21 HOH HOH . 
O 6 HOH S 16 23 23 HOH HOH . 
O 6 HOH S 17 24 24 HOH HOH . 
O 6 HOH S 18 26 26 HOH HOH . 
O 6 HOH S 19 27 27 HOH HOH . 
O 6 HOH S 20 30 30 HOH HOH . 
O 6 HOH S 21 31 31 HOH HOH . 
O 6 HOH S 22 32 32 HOH HOH . 
O 6 HOH S 23 33 33 HOH HOH . 
O 6 HOH S 24 34 34 HOH HOH . 
O 6 HOH S 25 35 35 HOH HOH . 
O 6 HOH S 26 36 36 HOH HOH . 
O 6 HOH S 27 37 37 HOH HOH . 
O 6 HOH S 28 38 38 HOH HOH . 
O 6 HOH S 29 39 39 HOH HOH . 
O 6 HOH S 30 41 41 HOH HOH . 
O 6 HOH S 31 46 46 HOH HOH . 
O 6 HOH S 32 47 47 HOH HOH . 
O 6 HOH S 33 48 48 HOH HOH . 
O 6 HOH S 34 49 49 HOH HOH . 
O 6 HOH S 35 50 50 HOH HOH . 
O 6 HOH S 36 53 53 HOH HOH . 
O 6 HOH S 37 55 55 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P PO4 . . . I 4 15.125 36.359 61.666 1 57.76 ? P PO4 1047 S 1 
HETATM 2 O O1 PO4 . . . I 4 14.729 35.026 61.151 1 56.62 ? O1 PO4 1047 S 1 
HETATM 3 O O2 PO4 . . . I 4 16.119 36.968 60.746 1 57.97 ? O2 PO4 1047 S 1 
HETATM 4 O O3 PO4 . . . I 4 13.926 37.233 61.75 1 56.79 ? O3 PO4 1047 S 1 
HETATM 5 O O4 PO4 . . . I 4 15.729 36.212 63.021 1 56.58 ? O4 PO4 1047 S 1 
#
_model_server_stats.io_time_ms              60 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           280 
_model_server_stats.encode_time_ms          27 
_model_server_stats.element_count           5 
#