data_1NXP # _model_server_result.job_id gonOKhlq523BsminExgHvA _model_server_result.datetime_utc '2025-09-07 05:22:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1nxp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":121}' # _entry.id 1NXP # _exptl.entry_id 1NXP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 81.996 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1NXP _cell.length_a 79.395 _cell.length_b 92.694 _cell.length_c 36.775 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NXP _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_566 x,-y+1,-z+1 1 0 0 0 -1 0 0 0 -1 0 92.694 36.775 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'H3 O3 P' _chem_comp.formula_weight 81.996 _chem_comp.id PHS _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1P PHS doub 226 n n P O2P PHS sing 227 n n P O3P PHS sing 228 n n O2P HO2P PHS sing 229 n n O3P HO3P PHS sing 230 n n HP1 P PHS sing 231 n n # _atom_sites.entry_id 1NXP _atom_sites.fract_transf_matrix[1][1] 0.012595 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010788 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.027192 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PHS A 1 121 101 PHS PHS . C 3 HOH A 1 122 1 HOH HOH . C 3 HOH A 2 123 2 HOH HOH . C 3 HOH A 3 124 3 HOH HOH . C 3 HOH A 4 125 4 HOH HOH . C 3 HOH A 5 126 5 HOH HOH . C 3 HOH A 6 127 6 HOH HOH . C 3 HOH A 7 128 7 HOH HOH . C 3 HOH A 8 129 8 HOH HOH . C 3 HOH A 9 130 10 HOH HOH . C 3 HOH A 10 131 11 HOH HOH . C 3 HOH A 11 132 12 HOH HOH . C 3 HOH A 12 133 13 HOH HOH . C 3 HOH A 13 134 15 HOH HOH . C 3 HOH A 14 135 16 HOH HOH . C 3 HOH A 15 136 17 HOH HOH . C 3 HOH A 16 137 18 HOH HOH . C 3 HOH A 17 138 19 HOH HOH . C 3 HOH A 18 139 20 HOH HOH . C 3 HOH A 19 140 21 HOH HOH . C 3 HOH A 20 141 22 HOH HOH . C 3 HOH A 21 142 23 HOH HOH . C 3 HOH A 22 143 24 HOH HOH . C 3 HOH A 23 144 25 HOH HOH . C 3 HOH A 24 145 26 HOH HOH . C 3 HOH A 25 146 27 HOH HOH . C 3 HOH A 26 147 28 HOH HOH . C 3 HOH A 27 148 29 HOH HOH . C 3 HOH A 28 149 30 HOH HOH . C 3 HOH A 29 150 31 HOH HOH . C 3 HOH A 30 151 32 HOH HOH . C 3 HOH A 31 152 33 HOH HOH . C 3 HOH A 32 153 34 HOH HOH . C 3 HOH A 33 154 35 HOH HOH . C 3 HOH A 34 155 36 HOH HOH . C 3 HOH A 35 156 37 HOH HOH . C 3 HOH A 36 157 38 HOH HOH . C 3 HOH A 37 158 39 HOH HOH . C 3 HOH A 38 159 40 HOH HOH . C 3 HOH A 39 160 41 HOH HOH . C 3 HOH A 40 161 42 HOH HOH . C 3 HOH A 41 162 43 HOH HOH . C 3 HOH A 42 163 44 HOH HOH . C 3 HOH A 43 164 45 HOH HOH . C 3 HOH A 44 165 46 HOH HOH . C 3 HOH A 45 166 47 HOH HOH . C 3 HOH A 46 167 48 HOH HOH . C 3 HOH A 47 168 49 HOH HOH . C 3 HOH A 48 169 50 HOH HOH . C 3 HOH A 49 170 52 HOH HOH . C 3 HOH A 50 171 53 HOH HOH . C 3 HOH A 51 172 54 HOH HOH . C 3 HOH A 52 173 55 HOH HOH . C 3 HOH A 53 174 56 HOH HOH . C 3 HOH A 54 175 57 HOH HOH . C 3 HOH A 55 176 58 HOH HOH . C 3 HOH A 56 177 59 HOH HOH . C 3 HOH A 57 178 60 HOH HOH . C 3 HOH A 58 179 61 HOH HOH . C 3 HOH A 59 180 62 HOH HOH . C 3 HOH A 60 181 63 HOH HOH . C 3 HOH A 61 182 64 HOH HOH . C 3 HOH A 62 183 65 HOH HOH . C 3 HOH A 63 184 66 HOH HOH . C 3 HOH A 64 185 67 HOH HOH . C 3 HOH A 65 186 68 HOH HOH . C 3 HOH A 66 187 69 HOH HOH . C 3 HOH A 67 188 70 HOH HOH . C 3 HOH A 68 189 71 HOH HOH . C 3 HOH A 69 190 73 HOH HOH . C 3 HOH A 70 191 74 HOH HOH . C 3 HOH A 71 192 75 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PHS . . . B 2 50.52 32.135 13.42 1 64.94 ? P PHS 121 A 1 HETATM 2 O O1P PHS . . . B 2 50.405 30.875 14.35 1 68.29 ? O1P PHS 121 A 1 HETATM 3 O O2P PHS . . . B 2 50.39 31.441 11.997 1 63.93 ? O2P PHS 121 A 1 HETATM 4 O O3P PHS . . . B 2 51.846 32.944 13.805 1 60.39 ? O3P PHS 121 A 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #