data_1O3B # _model_server_result.job_id DH5XW90WE5rOUJl-d_Qrrg _model_server_result.datetime_utc '2024-11-29 05:04:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1o3b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":247}' # _entry.id 1O3B # _exptl.entry_id 1O3B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1O3B _cell.length_a 63.67 _cell.length_b 63.5 _cell.length_c 69.14 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1O3B _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 137 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 A SG CYS 25 A CYS 42 1_555 A SG CYS 41 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? disulf ? disulf3 A SG CYS 109 A CYS 128 1_555 A SG CYS 210 A CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf4 A SG CYS 116 A CYS 136 1_555 A SG CYS 183 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? disulf ? disulf5 A SG CYS 148 A CYS 168 1_555 A SG CYS 162 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? disulf ? disulf6 A SG CYS 173 A CYS 191 1_555 A SG CYS 197 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc1 A OE2 GLU 52 A GLU 70 1_555 B CA CA . A CA 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? metalc ? metalc2 A O ASN 54 A ASN 72 1_555 B CA CA . A CA 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc3 A O VAL 57 A VAL 75 1_555 B CA CA . A CA 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? metalc ? metalc4 A OE2 GLU 62 A GLU 80 1_555 B CA CA . A CA 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? metalc ? metalc5 B CA CA . A CA 247 1_555 E O HOH . A HOH 248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc6 B CA CA . A CA 247 1_555 E O HOH . A HOH 560 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1O3B _atom_sites.fract_transf_matrix[1][1] 0.015706 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015748 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014463 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 247 247 CA CA . C 3 CL A 1 260 260 CL CL . D 4 780 A 1 246 246 780 BZM . E 5 HOH A 1 248 248 HOH HOH . E 5 HOH A 2 249 249 HOH HOH . E 5 HOH A 3 250 250 HOH HOH . E 5 HOH A 4 251 251 HOH HOH . E 5 HOH A 5 252 252 HOH HOH . E 5 HOH A 6 253 253 HOH HOH . E 5 HOH A 7 254 254 HOH HOH . E 5 HOH A 8 255 255 HOH HOH . E 5 HOH A 9 256 256 HOH HOH . E 5 HOH A 10 258 258 HOH HOH . E 5 HOH A 11 259 259 HOH HOH . E 5 HOH A 12 261 261 HOH HOH . E 5 HOH A 13 262 262 HOH HOH . E 5 HOH A 14 263 263 HOH HOH . E 5 HOH A 15 264 264 HOH HOH . E 5 HOH A 16 266 266 HOH HOH . E 5 HOH A 17 267 267 HOH HOH . E 5 HOH A 18 268 268 HOH HOH . E 5 HOH A 19 270 270 HOH HOH . E 5 HOH A 20 272 272 HOH HOH . E 5 HOH A 21 273 273 HOH HOH . E 5 HOH A 22 274 274 HOH HOH . E 5 HOH A 23 275 275 HOH HOH . E 5 HOH A 24 277 277 HOH HOH . E 5 HOH A 25 278 278 HOH HOH . E 5 HOH A 26 280 280 HOH HOH . E 5 HOH A 27 281 281 HOH HOH . E 5 HOH A 28 282 282 HOH HOH . E 5 HOH A 29 283 283 HOH HOH . E 5 HOH A 30 284 284 HOH HOH . E 5 HOH A 31 285 285 HOH HOH . E 5 HOH A 32 286 286 HOH HOH . E 5 HOH A 33 287 287 HOH HOH . E 5 HOH A 34 289 289 HOH HOH . E 5 HOH A 35 290 290 HOH HOH . E 5 HOH A 36 291 291 HOH HOH . E 5 HOH A 37 292 292 HOH HOH . E 5 HOH A 38 293 293 HOH HOH . E 5 HOH A 39 294 294 HOH HOH . E 5 HOH A 40 295 295 HOH HOH . E 5 HOH A 41 296 296 HOH HOH . E 5 HOH A 42 297 297 HOH HOH . E 5 HOH A 43 299 299 HOH HOH . E 5 HOH A 44 300 300 HOH HOH . E 5 HOH A 45 302 302 HOH HOH . E 5 HOH A 46 308 308 HOH HOH . E 5 HOH A 47 309 309 HOH HOH . E 5 HOH A 48 312 312 HOH HOH . E 5 HOH A 49 315 315 HOH HOH . E 5 HOH A 50 317 317 HOH HOH . E 5 HOH A 51 318 318 HOH HOH . E 5 HOH A 52 321 321 HOH HOH . E 5 HOH A 53 322 322 HOH HOH . E 5 HOH A 54 323 323 HOH HOH . E 5 HOH A 55 326 326 HOH HOH . E 5 HOH A 56 327 327 HOH HOH . E 5 HOH A 57 328 328 HOH HOH . E 5 HOH A 58 331 331 HOH HOH . E 5 HOH A 59 333 333 HOH HOH . E 5 HOH A 60 335 335 HOH HOH . E 5 HOH A 61 336 336 HOH HOH . E 5 HOH A 62 338 338 HOH HOH . E 5 HOH A 63 339 339 HOH HOH . E 5 HOH A 64 342 342 HOH HOH . E 5 HOH A 65 346 346 HOH HOH . E 5 HOH A 66 348 348 HOH HOH . E 5 HOH A 67 349 349 HOH HOH . E 5 HOH A 68 351 351 HOH HOH . E 5 HOH A 69 352 352 HOH HOH . E 5 HOH A 70 353 353 HOH HOH . E 5 HOH A 71 354 354 HOH HOH . E 5 HOH A 72 356 356 HOH HOH . E 5 HOH A 73 358 358 HOH HOH . E 5 HOH A 74 360 360 HOH HOH . E 5 HOH A 75 361 361 HOH HOH . E 5 HOH A 76 363 363 HOH HOH . E 5 HOH A 77 364 364 HOH HOH . E 5 HOH A 78 369 369 HOH HOH . E 5 HOH A 79 370 370 HOH HOH . E 5 HOH A 80 371 371 HOH HOH . E 5 HOH A 81 372 372 HOH HOH . E 5 HOH A 82 374 374 HOH HOH . E 5 HOH A 83 375 375 HOH HOH . E 5 HOH A 84 376 376 HOH HOH . E 5 HOH A 85 377 377 HOH HOH . E 5 HOH A 86 378 378 HOH HOH . E 5 HOH A 87 380 380 HOH HOH . E 5 HOH A 88 381 381 HOH HOH . E 5 HOH A 89 382 382 HOH HOH . E 5 HOH A 90 383 383 HOH HOH . E 5 HOH A 91 384 384 HOH HOH . E 5 HOH A 92 385 385 HOH HOH . E 5 HOH A 93 389 389 HOH HOH . E 5 HOH A 94 390 390 HOH HOH . E 5 HOH A 95 391 391 HOH HOH . E 5 HOH A 96 392 392 HOH HOH . E 5 HOH A 97 393 393 HOH HOH . E 5 HOH A 98 395 395 HOH HOH . E 5 HOH A 99 397 397 HOH HOH . E 5 HOH A 100 402 402 HOH HOH . E 5 HOH A 101 403 403 HOH HOH . E 5 HOH A 102 404 404 HOH HOH . E 5 HOH A 103 406 406 HOH HOH . E 5 HOH A 104 410 410 HOH HOH . E 5 HOH A 105 412 412 HOH HOH . E 5 HOH A 106 421 421 HOH HOH . E 5 HOH A 107 430 430 HOH HOH . E 5 HOH A 108 431 431 HOH HOH . E 5 HOH A 109 432 432 HOH HOH . E 5 HOH A 110 434 434 HOH HOH . E 5 HOH A 111 439 439 HOH HOH . E 5 HOH A 112 442 442 HOH HOH . E 5 HOH A 113 448 448 HOH HOH . E 5 HOH A 114 450 450 HOH HOH . E 5 HOH A 115 457 457 HOH HOH . E 5 HOH A 116 480 480 HOH HOH . E 5 HOH A 117 489 489 HOH HOH . E 5 HOH A 118 502 502 HOH HOH . E 5 HOH A 119 504 504 HOH HOH . E 5 HOH A 120 505 505 HOH HOH . E 5 HOH A 121 508 508 HOH HOH . E 5 HOH A 122 537 537 HOH HOH . E 5 HOH A 123 540 540 HOH HOH . E 5 HOH A 124 542 542 HOH HOH . E 5 HOH A 125 543 543 HOH HOH . E 5 HOH A 126 547 547 HOH HOH . E 5 HOH A 127 548 548 HOH HOH . E 5 HOH A 128 552 552 HOH HOH . E 5 HOH A 129 557 557 HOH HOH . E 5 HOH A 130 559 559 HOH HOH . E 5 HOH A 131 560 560 HOH HOH . E 5 HOH A 132 561 561 HOH HOH . E 5 HOH A 133 588 588 HOH HOH . E 5 HOH A 134 636 636 HOH HOH . E 5 HOH A 135 650 650 HOH HOH . E 5 HOH A 136 664 664 HOH HOH . E 5 HOH A 137 683 683 HOH HOH . E 5 HOH A 138 691 691 HOH HOH . E 5 HOH A 139 694 694 HOH HOH . E 5 HOH A 140 703 703 HOH HOH . E 5 HOH A 141 709 709 HOH HOH . E 5 HOH A 142 714 714 HOH HOH . E 5 HOH A 143 716 716 HOH HOH . E 5 HOH A 144 727 727 HOH HOH . E 5 HOH A 145 728 728 HOH HOH . E 5 HOH A 146 746 746 HOH HOH . E 5 HOH A 147 750 750 HOH HOH . E 5 HOH A 148 773 773 HOH HOH . E 5 HOH A 149 803 803 HOH HOH . E 5 HOH A 150 829 829 HOH HOH . E 5 HOH A 151 857 857 HOH HOH . E 5 HOH A 152 866 866 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 63.939 _atom_site.Cartn_y 7.022 _atom_site.Cartn_z 35.158 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 33.28 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 247 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 381 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #