data_1O3D # _model_server_result.job_id Dec--x60whnTxcQ-kqtZEQ _model_server_result.datetime_utc '2024-11-25 13:41:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1o3d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":247}' # _entry.id 1O3D # _exptl.entry_id 1O3D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1O3D _cell.length_a 63.73 _cell.length_b 63.29 _cell.length_c 69.3 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1O3D _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 137 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf2 A SG CYS 25 A CYS 42 1_555 A SG CYS 41 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf3 A SG CYS 109 A CYS 128 1_555 A SG CYS 210 A CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf4 A SG CYS 116 A CYS 136 1_555 A SG CYS 183 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? disulf ? disulf5 A SG CYS 148 A CYS 168 1_555 A SG CYS 162 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf6 A SG CYS 173 A CYS 191 1_555 A SG CYS 197 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc1 A OE2 GLU 52 A GLU 70 1_555 B CA CA . A CA 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc2 A O ASN 54 A ASN 72 1_555 B CA CA . A CA 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? metalc ? metalc3 A O VAL 57 A VAL 75 1_555 B CA CA . A CA 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? metalc ? metalc4 A OE2 GLU 62 A GLU 80 1_555 B CA CA . A CA 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? metalc ? metalc5 B CA CA . A CA 247 1_555 E O HOH . A HOH 248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc6 B CA CA . A CA 247 1_555 E O HOH . A HOH 560 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1O3D _atom_sites.fract_transf_matrix[1][1] 0.015691 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0158 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01443 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 247 247 CA CA . C 3 CL A 1 260 260 CL CL . D 4 780 A 1 246 246 780 BZM . E 5 HOH A 1 248 248 HOH HOH . E 5 HOH A 2 249 249 HOH HOH . E 5 HOH A 3 250 250 HOH HOH . E 5 HOH A 4 251 251 HOH HOH . E 5 HOH A 5 252 252 HOH HOH . E 5 HOH A 6 253 253 HOH HOH . E 5 HOH A 7 254 254 HOH HOH . E 5 HOH A 8 255 255 HOH HOH . E 5 HOH A 9 256 256 HOH HOH . E 5 HOH A 10 258 258 HOH HOH . E 5 HOH A 11 259 259 HOH HOH . E 5 HOH A 12 261 261 HOH HOH . E 5 HOH A 13 262 262 HOH HOH . E 5 HOH A 14 263 263 HOH HOH . E 5 HOH A 15 264 264 HOH HOH . E 5 HOH A 16 266 266 HOH HOH . E 5 HOH A 17 267 267 HOH HOH . E 5 HOH A 18 268 268 HOH HOH . E 5 HOH A 19 269 269 HOH HOH . E 5 HOH A 20 270 270 HOH HOH . E 5 HOH A 21 272 272 HOH HOH . E 5 HOH A 22 273 273 HOH HOH . E 5 HOH A 23 274 274 HOH HOH . E 5 HOH A 24 275 275 HOH HOH . E 5 HOH A 25 277 277 HOH HOH . E 5 HOH A 26 278 278 HOH HOH . E 5 HOH A 27 280 280 HOH HOH . E 5 HOH A 28 281 281 HOH HOH . E 5 HOH A 29 282 282 HOH HOH . E 5 HOH A 30 283 283 HOH HOH . E 5 HOH A 31 284 284 HOH HOH . E 5 HOH A 32 285 285 HOH HOH . E 5 HOH A 33 286 286 HOH HOH . E 5 HOH A 34 287 287 HOH HOH . E 5 HOH A 35 288 288 HOH HOH . E 5 HOH A 36 289 289 HOH HOH . E 5 HOH A 37 290 290 HOH HOH . E 5 HOH A 38 291 291 HOH HOH . E 5 HOH A 39 292 292 HOH HOH . E 5 HOH A 40 293 293 HOH HOH . E 5 HOH A 41 294 294 HOH HOH . E 5 HOH A 42 295 295 HOH HOH . E 5 HOH A 43 296 296 HOH HOH . E 5 HOH A 44 297 297 HOH HOH . E 5 HOH A 45 299 299 HOH HOH . E 5 HOH A 46 300 300 HOH HOH . E 5 HOH A 47 302 302 HOH HOH . E 5 HOH A 48 303 303 HOH HOH . E 5 HOH A 49 308 308 HOH HOH . E 5 HOH A 50 309 309 HOH HOH . E 5 HOH A 51 312 312 HOH HOH . E 5 HOH A 52 315 315 HOH HOH . E 5 HOH A 53 317 317 HOH HOH . E 5 HOH A 54 318 318 HOH HOH . E 5 HOH A 55 321 321 HOH HOH . E 5 HOH A 56 322 322 HOH HOH . E 5 HOH A 57 323 323 HOH HOH . E 5 HOH A 58 326 326 HOH HOH . E 5 HOH A 59 327 327 HOH HOH . E 5 HOH A 60 328 328 HOH HOH . E 5 HOH A 61 331 331 HOH HOH . E 5 HOH A 62 333 333 HOH HOH . E 5 HOH A 63 336 336 HOH HOH . E 5 HOH A 64 338 338 HOH HOH . E 5 HOH A 65 339 339 HOH HOH . E 5 HOH A 66 342 342 HOH HOH . E 5 HOH A 67 346 346 HOH HOH . E 5 HOH A 68 348 348 HOH HOH . E 5 HOH A 69 349 349 HOH HOH . E 5 HOH A 70 351 351 HOH HOH . E 5 HOH A 71 352 352 HOH HOH . E 5 HOH A 72 353 353 HOH HOH . E 5 HOH A 73 354 354 HOH HOH . E 5 HOH A 74 356 356 HOH HOH . E 5 HOH A 75 358 358 HOH HOH . E 5 HOH A 76 360 360 HOH HOH . E 5 HOH A 77 361 361 HOH HOH . E 5 HOH A 78 363 363 HOH HOH . E 5 HOH A 79 364 364 HOH HOH . E 5 HOH A 80 369 369 HOH HOH . E 5 HOH A 81 370 370 HOH HOH . E 5 HOH A 82 371 371 HOH HOH . E 5 HOH A 83 374 374 HOH HOH . E 5 HOH A 84 375 375 HOH HOH . E 5 HOH A 85 376 376 HOH HOH . E 5 HOH A 86 377 377 HOH HOH . E 5 HOH A 87 378 378 HOH HOH . E 5 HOH A 88 380 380 HOH HOH . E 5 HOH A 89 381 381 HOH HOH . E 5 HOH A 90 382 382 HOH HOH . E 5 HOH A 91 383 383 HOH HOH . E 5 HOH A 92 384 384 HOH HOH . E 5 HOH A 93 385 385 HOH HOH . E 5 HOH A 94 389 389 HOH HOH . E 5 HOH A 95 390 390 HOH HOH . E 5 HOH A 96 391 391 HOH HOH . E 5 HOH A 97 392 392 HOH HOH . E 5 HOH A 98 393 393 HOH HOH . E 5 HOH A 99 395 395 HOH HOH . E 5 HOH A 100 397 397 HOH HOH . E 5 HOH A 101 402 402 HOH HOH . E 5 HOH A 102 403 403 HOH HOH . E 5 HOH A 103 404 404 HOH HOH . E 5 HOH A 104 406 406 HOH HOH . E 5 HOH A 105 410 410 HOH HOH . E 5 HOH A 106 412 412 HOH HOH . E 5 HOH A 107 416 416 HOH HOH . E 5 HOH A 108 421 421 HOH HOH . E 5 HOH A 109 430 430 HOH HOH . E 5 HOH A 110 431 431 HOH HOH . E 5 HOH A 111 432 432 HOH HOH . E 5 HOH A 112 434 434 HOH HOH . E 5 HOH A 113 439 439 HOH HOH . E 5 HOH A 114 442 442 HOH HOH . E 5 HOH A 115 450 450 HOH HOH . E 5 HOH A 116 452 452 HOH HOH . E 5 HOH A 117 457 457 HOH HOH . E 5 HOH A 118 480 480 HOH HOH . E 5 HOH A 119 489 489 HOH HOH . E 5 HOH A 120 497 497 HOH HOH . E 5 HOH A 121 502 502 HOH HOH . E 5 HOH A 122 504 504 HOH HOH . E 5 HOH A 123 505 505 HOH HOH . E 5 HOH A 124 508 508 HOH HOH . E 5 HOH A 125 537 537 HOH HOH . E 5 HOH A 126 539 539 HOH HOH . E 5 HOH A 127 540 540 HOH HOH . E 5 HOH A 128 542 542 HOH HOH . E 5 HOH A 129 543 543 HOH HOH . E 5 HOH A 130 547 547 HOH HOH . E 5 HOH A 131 548 548 HOH HOH . E 5 HOH A 132 552 552 HOH HOH . E 5 HOH A 133 557 557 HOH HOH . E 5 HOH A 134 559 559 HOH HOH . E 5 HOH A 135 560 560 HOH HOH . E 5 HOH A 136 561 561 HOH HOH . E 5 HOH A 137 567 567 HOH HOH . E 5 HOH A 138 588 588 HOH HOH . E 5 HOH A 139 636 636 HOH HOH . E 5 HOH A 140 650 650 HOH HOH . E 5 HOH A 141 664 664 HOH HOH . E 5 HOH A 142 666 666 HOH HOH . E 5 HOH A 143 672 672 HOH HOH . E 5 HOH A 144 678 678 HOH HOH . E 5 HOH A 145 683 683 HOH HOH . E 5 HOH A 146 685 685 HOH HOH . E 5 HOH A 147 688 688 HOH HOH . E 5 HOH A 148 690 690 HOH HOH . E 5 HOH A 149 694 694 HOH HOH . E 5 HOH A 150 701 701 HOH HOH . E 5 HOH A 151 703 703 HOH HOH . E 5 HOH A 152 705 705 HOH HOH . E 5 HOH A 153 709 709 HOH HOH . E 5 HOH A 154 713 713 HOH HOH . E 5 HOH A 155 714 714 HOH HOH . E 5 HOH A 156 716 716 HOH HOH . E 5 HOH A 157 727 727 HOH HOH . E 5 HOH A 158 728 728 HOH HOH . E 5 HOH A 159 746 746 HOH HOH . E 5 HOH A 160 750 750 HOH HOH . E 5 HOH A 161 752 752 HOH HOH . E 5 HOH A 162 773 773 HOH HOH . E 5 HOH A 163 804 804 HOH HOH . E 5 HOH A 164 829 829 HOH HOH . E 5 HOH A 165 857 857 HOH HOH . E 5 HOH A 166 866 866 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 63.993 _atom_site.Cartn_y 6.992 _atom_site.Cartn_z 35.17 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 28.25 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 247 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #