data_1O46 # _model_server_result.job_id G372Eu5GrUf88TaqqeXfMQ _model_server_result.datetime_utc '2024-12-04 09:40:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1o46 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":300}' # _entry.id 1O46 # _exptl.entry_id 1O46 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 661.673 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-{4-[2-ACETYLAMINO-2-(1-BIPHENYL-4-YLMETHYL-2-OXO-AZEPAN-3-YLCARBAMOYL)-ETHYL]-2-METHOXYCARBONYL-PHENYL}-2-FLUORO-MALONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1O46 _cell.length_a 26.587 _cell.length_b 58.554 _cell.length_c 64.188 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1O46 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C35 H36 F N3 O9' _chem_comp.formula_weight 661.673 _chem_comp.id 903 _chem_comp.mon_nstd_flag . _chem_comp.name '2-{4-[2-ACETYLAMINO-2-(1-BIPHENYL-4-YLMETHYL-2-OXO-AZEPAN-3-YLCARBAMOYL)-ETHYL]-2-METHOXYCARBONYL-PHENYL}-2-FLUORO-MALONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms RU90395 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 903 doub 1 n y C1 C6 903 sing 2 n y C1 C7 903 sing 3 n n C2 C3 903 sing 4 n y C2 H2 903 sing 5 n n C3 C4 903 doub 6 n y C3 H3 903 sing 7 n n C4 C5 903 sing 8 n y C4 C40 903 sing 9 n n C5 C6 903 doub 10 n y C5 C37 903 sing 11 n n C6 H6 903 sing 12 n n C7 C8 903 sing 13 n n C7 H71 903 sing 14 n n C7 H72 903 sing 15 n n C8 C9 903 sing 16 n n C8 N12 903 sing 17 n n C8 H8 903 sing 18 n n C9 N10 903 sing 19 n n C9 O11 903 doub 20 n n N10 C16 903 sing 21 n n N10 H10 903 sing 22 n n N12 C13 903 sing 23 n n N12 H12 903 sing 24 n n C13 O14 903 doub 25 n n C13 C15 903 sing 26 n n C15 H151 903 sing 27 n n C15 H152 903 sing 28 n n C15 H153 903 sing 29 n n C16 C17 903 sing 30 n n C16 C25 903 sing 31 n n C16 H16 903 sing 32 n n C17 N18 903 sing 33 n n C17 O19 903 doub 34 n n N18 C20 903 sing 35 n n N18 C22 903 sing 36 n n C20 C21 903 sing 37 n n C20 H201 903 sing 38 n n C20 H202 903 sing 39 n n C21 C24 903 sing 40 n n C21 H211 903 sing 41 n n C21 H212 903 sing 42 n n C22 C23 903 sing 43 n n C22 H221 903 sing 44 n n C22 H222 903 sing 45 n n C23 C26 903 doub 46 n y C23 C30 903 sing 47 n y C24 C25 903 sing 48 n n C24 H241 903 sing 49 n n C24 H242 903 sing 50 n n C25 H251 903 sing 51 n n C25 H252 903 sing 52 n n C26 C27 903 sing 53 n y C26 H26 903 sing 54 n n C27 C28 903 doub 55 n y C27 H27 903 sing 56 n n C28 C29 903 sing 57 n y C28 C31 903 sing 58 n y C29 C30 903 doub 59 n y C29 H29 903 sing 60 n n C30 H30 903 sing 61 n n C31 C32 903 sing 62 n y C31 C36 903 doub 63 n y C32 C33 903 doub 64 n y C32 H32 903 sing 65 n n C33 C34 903 sing 66 n y C33 H33 903 sing 67 n n C34 C35 903 doub 68 n y C34 H34 903 sing 69 n n C35 C36 903 sing 70 n y C35 H35 903 sing 71 n n C36 H36 903 sing 72 n n C37 O38 903 sing 73 n n C37 O39 903 doub 74 n n O38 C81 903 sing 75 n n C40 C41 903 sing 76 n n C40 C75 903 sing 77 n n C40 F80 903 sing 78 n n C41 O42 903 sing 79 n n C41 O43 903 doub 80 n n O42 H42 903 sing 81 n n C75 O76 903 sing 82 n n C75 O77 903 doub 83 n n O76 H76 903 sing 84 n n C81 H811 903 sing 85 n n C81 H812 903 sing 86 n n C81 H813 903 sing 87 n n # _atom_sites.entry_id 1O46 _atom_sites.fract_transf_matrix[1][1] 0.037612 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017078 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015579 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 903 A 1 300 1 903 INH . C 3 HOH A 1 301 1 HOH HOH . C 3 HOH A 2 302 2 HOH HOH . C 3 HOH A 3 303 3 HOH HOH . C 3 HOH A 4 304 4 HOH HOH . C 3 HOH A 5 305 5 HOH HOH . C 3 HOH A 6 306 6 HOH HOH . C 3 HOH A 7 307 7 HOH HOH . C 3 HOH A 8 308 8 HOH HOH . C 3 HOH A 9 309 9 HOH HOH . C 3 HOH A 10 310 10 HOH HOH . C 3 HOH A 11 311 11 HOH HOH . C 3 HOH A 12 312 12 HOH HOH . C 3 HOH A 13 313 13 HOH HOH . C 3 HOH A 14 314 14 HOH HOH . C 3 HOH A 15 315 15 HOH HOH . C 3 HOH A 16 316 16 HOH HOH . C 3 HOH A 17 317 17 HOH HOH . C 3 HOH A 18 318 18 HOH HOH . C 3 HOH A 19 319 19 HOH HOH . C 3 HOH A 20 320 20 HOH HOH . C 3 HOH A 21 321 21 HOH HOH . C 3 HOH A 22 322 22 HOH HOH . C 3 HOH A 23 323 23 HOH HOH . C 3 HOH A 24 324 24 HOH HOH . C 3 HOH A 25 325 25 HOH HOH . C 3 HOH A 26 326 26 HOH HOH . C 3 HOH A 27 327 27 HOH HOH . C 3 HOH A 28 328 28 HOH HOH . C 3 HOH A 29 329 29 HOH HOH . C 3 HOH A 30 330 30 HOH HOH . C 3 HOH A 31 331 31 HOH HOH . C 3 HOH A 32 332 32 HOH HOH . C 3 HOH A 33 333 33 HOH HOH . C 3 HOH A 34 334 34 HOH HOH . C 3 HOH A 35 335 36 HOH HOH . C 3 HOH A 36 336 37 HOH HOH . C 3 HOH A 37 337 38 HOH HOH . C 3 HOH A 38 338 39 HOH HOH . C 3 HOH A 39 339 40 HOH HOH . C 3 HOH A 40 340 41 HOH HOH . C 3 HOH A 41 341 42 HOH HOH . C 3 HOH A 42 342 45 HOH HOH . C 3 HOH A 43 343 46 HOH HOH . C 3 HOH A 44 344 48 HOH HOH . C 3 HOH A 45 345 49 HOH HOH . C 3 HOH A 46 346 50 HOH HOH . C 3 HOH A 47 347 51 HOH HOH . C 3 HOH A 48 348 52 HOH HOH . C 3 HOH A 49 349 55 HOH HOH . C 3 HOH A 50 350 57 HOH HOH . C 3 HOH A 51 351 59 HOH HOH . C 3 HOH A 52 352 60 HOH HOH . C 3 HOH A 53 353 62 HOH HOH . C 3 HOH A 54 354 64 HOH HOH . C 3 HOH A 55 355 66 HOH HOH . C 3 HOH A 56 356 68 HOH HOH . C 3 HOH A 57 357 69 HOH HOH . C 3 HOH A 58 358 70 HOH HOH . C 3 HOH A 59 359 71 HOH HOH . C 3 HOH A 60 360 72 HOH HOH . C 3 HOH A 61 361 74 HOH HOH . C 3 HOH A 62 362 77 HOH HOH . C 3 HOH A 63 363 78 HOH HOH . C 3 HOH A 64 364 79 HOH HOH . C 3 HOH A 65 365 80 HOH HOH . C 3 HOH A 66 366 81 HOH HOH . C 3 HOH A 67 367 82 HOH HOH . C 3 HOH A 68 368 85 HOH HOH . C 3 HOH A 69 369 89 HOH HOH . C 3 HOH A 70 370 90 HOH HOH . C 3 HOH A 71 371 91 HOH HOH . C 3 HOH A 72 372 92 HOH HOH . C 3 HOH A 73 373 93 HOH HOH . C 3 HOH A 74 374 94 HOH HOH . C 3 HOH A 75 375 96 HOH HOH . C 3 HOH A 76 376 98 HOH HOH . C 3 HOH A 77 377 99 HOH HOH . C 3 HOH A 78 378 101 HOH HOH . C 3 HOH A 79 379 102 HOH HOH . C 3 HOH A 80 380 103 HOH HOH . C 3 HOH A 81 381 104 HOH HOH . C 3 HOH A 82 382 105 HOH HOH . C 3 HOH A 83 383 106 HOH HOH . C 3 HOH A 84 384 107 HOH HOH . C 3 HOH A 85 385 108 HOH HOH . C 3 HOH A 86 386 109 HOH HOH . C 3 HOH A 87 387 110 HOH HOH . C 3 HOH A 88 388 111 HOH HOH . C 3 HOH A 89 389 112 HOH HOH . C 3 HOH A 90 390 113 HOH HOH . C 3 HOH A 91 391 114 HOH HOH . C 3 HOH A 92 392 115 HOH HOH . C 3 HOH A 93 393 116 HOH HOH . C 3 HOH A 94 394 117 HOH HOH . C 3 HOH A 95 395 118 HOH HOH . C 3 HOH A 96 396 119 HOH HOH . C 3 HOH A 97 397 122 HOH HOH . C 3 HOH A 98 398 124 HOH HOH . C 3 HOH A 99 399 128 HOH HOH . C 3 HOH A 100 400 132 HOH HOH . C 3 HOH A 101 401 133 HOH HOH . C 3 HOH A 102 402 134 HOH HOH . C 3 HOH A 103 403 136 HOH HOH . C 3 HOH A 104 404 137 HOH HOH . C 3 HOH A 105 405 141 HOH HOH . C 3 HOH A 106 406 149 HOH HOH . C 3 HOH A 107 407 150 HOH HOH . C 3 HOH A 108 408 152 HOH HOH . C 3 HOH A 109 409 154 HOH HOH . C 3 HOH A 110 410 156 HOH HOH . C 3 HOH A 111 411 160 HOH HOH . C 3 HOH A 112 412 161 HOH HOH . C 3 HOH A 113 413 164 HOH HOH . C 3 HOH A 114 414 166 HOH HOH . C 3 HOH A 115 415 167 HOH HOH . C 3 HOH A 116 416 168 HOH HOH . C 3 HOH A 117 417 170 HOH HOH . C 3 HOH A 118 418 173 HOH HOH . C 3 HOH A 119 419 177 HOH HOH . C 3 HOH A 120 420 178 HOH HOH . C 3 HOH A 121 421 179 HOH HOH . C 3 HOH A 122 422 181 HOH HOH . C 3 HOH A 123 423 182 HOH HOH . C 3 HOH A 124 424 185 HOH HOH . C 3 HOH A 125 425 187 HOH HOH . C 3 HOH A 126 426 188 HOH HOH . C 3 HOH A 127 427 189 HOH HOH . C 3 HOH A 128 428 190 HOH HOH . C 3 HOH A 129 429 191 HOH HOH . C 3 HOH A 130 430 193 HOH HOH . C 3 HOH A 131 431 194 HOH HOH . C 3 HOH A 132 432 195 HOH HOH . C 3 HOH A 133 433 196 HOH HOH . C 3 HOH A 134 434 197 HOH HOH . C 3 HOH A 135 435 198 HOH HOH . C 3 HOH A 136 436 199 HOH HOH . C 3 HOH A 137 437 200 HOH HOH . C 3 HOH A 138 438 201 HOH HOH . C 3 HOH A 139 439 202 HOH HOH . C 3 HOH A 140 440 203 HOH HOH . C 3 HOH A 141 441 204 HOH HOH . C 3 HOH A 142 442 205 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 903 . . . B 2 19.135 25.517 19.993 1 37.43 ? C1 903 300 A 1 HETATM 2 C C2 903 . . . B 2 17.959 25.09 19.329 1 34.98 ? C2 903 300 A 1 HETATM 3 C C3 903 . . . B 2 17.228 26.083 18.57 1 34.85 ? C3 903 300 A 1 HETATM 4 C C4 903 . . . B 2 17.761 27.425 18.369 1 32.65 ? C4 903 300 A 1 HETATM 5 C C5 903 . . . B 2 19.04 27.844 19.033 1 36.6 ? C5 903 300 A 1 HETATM 6 C C6 903 . . . B 2 19.672 26.885 19.845 1 37.24 ? C6 903 300 A 1 HETATM 7 C C7 903 . . . B 2 19.91 24.663 20.957 1 37.09 ? C7 903 300 A 1 HETATM 8 C C8 903 . . . B 2 19.621 25.209 22.341 1 38.6 ? C8 903 300 A 1 HETATM 9 C C9 903 . . . B 2 20.388 24.409 23.398 1 39.33 ? C9 903 300 A 1 HETATM 10 N N10 903 . . . B 2 19.605 23.308 23.824 1 37.71 ? N10 903 300 A 1 HETATM 11 O O11 903 . . . B 2 21.566 24.711 23.778 1 38.63 ? O11 903 300 A 1 HETATM 12 N N12 903 . . . B 2 20.135 26.624 22.483 1 41.52 ? N12 903 300 A 1 HETATM 13 C C13 903 . . . B 2 19.336 27.497 23.094 1 43.07 ? C13 903 300 A 1 HETATM 14 O O14 903 . . . B 2 18.118 27.308 23.273 1 44.26 ? O14 903 300 A 1 HETATM 15 C C15 903 . . . B 2 20.085 28.856 23.491 1 42.27 ? C15 903 300 A 1 HETATM 16 C C16 903 . . . B 2 20.461 22.275 24.48 1 35.77 ? C16 903 300 A 1 HETATM 17 C C17 903 . . . B 2 21.464 21.508 23.488 1 35.83 ? C17 903 300 A 1 HETATM 18 N N18 903 . . . B 2 22.422 20.616 24.285 1 33.02 ? N18 903 300 A 1 HETATM 19 O O19 903 . . . B 2 21.497 21.636 22.217 1 35.1 ? O19 903 300 A 1 HETATM 20 C C20 903 . . . B 2 22.262 20.237 25.72 1 31.32 ? C20 903 300 A 1 HETATM 21 C C21 903 . . . B 2 20.939 19.691 26.156 1 29.87 ? C21 903 300 A 1 HETATM 22 C C22 903 . . . B 2 23.522 19.897 23.615 1 31.95 ? C22 903 300 A 1 HETATM 23 C C23 903 . . . B 2 22.931 18.608 23.275 1 31.14 ? C23 903 300 A 1 HETATM 24 C C24 903 . . . B 2 19.926 20.784 26.53 1 30.92 ? C24 903 300 A 1 HETATM 25 C C25 903 . . . B 2 19.4 21.579 25.36 1 32.21 ? C25 903 300 A 1 HETATM 26 C C26 903 . . . B 2 23.391 17.484 23.945 1 30.38 ? C26 903 300 A 1 HETATM 27 C C27 903 . . . B 2 22.633 16.282 23.781 1 30.67 ? C27 903 300 A 1 HETATM 28 C C28 903 . . . B 2 21.487 16.193 23.009 1 29.97 ? C28 903 300 A 1 HETATM 29 C C29 903 . . . B 2 21.014 17.34 22.309 1 31.39 ? C29 903 300 A 1 HETATM 30 C C30 903 . . . B 2 21.751 18.566 22.409 1 32.66 ? C30 903 300 A 1 HETATM 31 C C31 903 . . . B 2 20.877 14.89 22.651 1 30.84 ? C31 903 300 A 1 HETATM 32 C C32 903 . . . B 2 19.407 14.797 22.496 1 29.71 ? C32 903 300 A 1 HETATM 33 C C33 903 . . . B 2 18.807 13.516 22.305 1 29.57 ? C33 903 300 A 1 HETATM 34 C C34 903 . . . B 2 19.64 12.37 22.247 1 30.53 ? C34 903 300 A 1 HETATM 35 C C35 903 . . . B 2 21.07 12.515 22.216 1 32.14 ? C35 903 300 A 1 HETATM 36 C C36 903 . . . B 2 21.754 13.769 22.434 1 31.23 ? C36 903 300 A 1 HETATM 37 C C37 903 . . . B 2 19.846 29.209 18.907 1 37.48 ? C37 903 300 A 1 HETATM 38 O O38 903 . . . B 2 19.84 29.834 20.137 1 40.97 ? O38 903 300 A 1 HETATM 39 O O39 903 . . . B 2 20.176 29.652 17.855 1 34.78 ? O39 903 300 A 1 HETATM 40 C C40 903 . . . B 2 17.058 28.312 17.272 1 30.02 ? C40 903 300 A 1 HETATM 41 C C41 903 . . . B 2 17.299 29.787 17.194 1 30.01 ? C41 903 300 A 1 HETATM 42 O O42 903 . . . B 2 17.342 30.327 18.567 1 30.28 ? O42 903 300 A 1 HETATM 43 O O43 903 . . . B 2 17.301 30.362 16.085 1 30.95 ? O43 903 300 A 1 HETATM 44 C C75 903 . . . B 2 15.572 28.662 17.891 1 25.55 ? C75 903 300 A 1 HETATM 45 O O76 903 . . . B 2 14.775 28.71 17.072 1 26.12 ? O76 903 300 A 1 HETATM 46 O O77 903 . . . B 2 15.162 29.016 19.058 1 21.8 ? O77 903 300 A 1 HETATM 47 F F80 903 . . . B 2 17.372 28.216 15.721 1 27.17 ? F80 903 300 A 1 HETATM 48 C C81 903 . . . B 2 20.201 31.006 21.075 1 42.9 ? C81 903 300 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 359 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 48 #