data_1O4I # _model_server_result.job_id zaHNmT-ICXhjidsMnKxPlw _model_server_result.datetime_utc '2024-11-23 23:58:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1o4i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":300}' # _entry.id 1O4I # _exptl.entry_id 1O4I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 298.271 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'cyclohexylmethyl 2-formylphenyl hydrogen (S)-phosphate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1O4I _cell.length_a 26.3 _cell.length_b 58.7 _cell.length_c 63.9 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1O4I _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 44 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 44 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C7 _struct_conn.ptnr2_label_comp_id 219 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id 219 _struct_conn.ptnr2_auth_seq_id 300 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.759 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C14 H19 O5 P' _chem_comp.formula_weight 298.271 _chem_comp.id 219 _chem_comp.mon_nstd_flag . _chem_comp.name 'cyclohexylmethyl 2-formylphenyl hydrogen (S)-phosphate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms PAS219 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C1 219 doub 1 n y C6 C1 219 sing 2 n y C1 H1 219 sing 3 n n C3 C2 219 sing 4 n y C2 H2 219 sing 5 n n C4 C3 219 doub 6 n y C3 H3 219 sing 7 n n C7 C4 219 sing 8 n n C4 C5 219 sing 9 n y O8 C5 219 sing 10 n n C5 C6 219 doub 11 n y C6 H6 219 sing 12 n n O17 C7 219 doub 13 n n C7 H7 219 sing 14 n n P9 O8 219 sing 15 n n O19 P9 219 doub 16 n n O10 P9 219 sing 17 n n P9 O11 219 sing 18 n n C12 O10 219 sing 19 n n O11 HO11 219 sing 20 n n C21 C12 219 sing 21 n n C12 H12 219 sing 22 n n C12 H12A 219 sing 23 n n C24 C21 219 sing 24 n n C21 C28 219 sing 25 n n C21 H21 219 sing 26 n n C24 C25 219 sing 27 n n C24 H24 219 sing 28 n n C24 H24A 219 sing 29 n n C25 C26 219 sing 30 n n C25 H25 219 sing 31 n n C25 H25A 219 sing 32 n n C26 C27 219 sing 33 n n C26 H26 219 sing 34 n n C26 H26A 219 sing 35 n n C28 C27 219 sing 36 n n C27 H27 219 sing 37 n n C27 H27A 219 sing 38 n n C28 H28 219 sing 39 n n C28 H28A 219 sing 40 n n # _atom_sites.entry_id 1O4I _atom_sites.fract_transf_matrix[1][1] 0.038023 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017036 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015649 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 219 A 1 300 1 219 INH . C 3 HOH A 1 301 1 HOH HOH . C 3 HOH A 2 302 2 HOH HOH . C 3 HOH A 3 303 3 HOH HOH . C 3 HOH A 4 304 4 HOH HOH . C 3 HOH A 5 305 5 HOH HOH . C 3 HOH A 6 306 6 HOH HOH . C 3 HOH A 7 307 7 HOH HOH . C 3 HOH A 8 308 8 HOH HOH . C 3 HOH A 9 309 9 HOH HOH . C 3 HOH A 10 310 10 HOH HOH . C 3 HOH A 11 311 11 HOH HOH . C 3 HOH A 12 312 12 HOH HOH . C 3 HOH A 13 313 13 HOH HOH . C 3 HOH A 14 314 14 HOH HOH . C 3 HOH A 15 315 15 HOH HOH . C 3 HOH A 16 316 16 HOH HOH . C 3 HOH A 17 317 17 HOH HOH . C 3 HOH A 18 318 18 HOH HOH . C 3 HOH A 19 319 19 HOH HOH . C 3 HOH A 20 320 20 HOH HOH . C 3 HOH A 21 321 21 HOH HOH . C 3 HOH A 22 322 22 HOH HOH . C 3 HOH A 23 323 23 HOH HOH . C 3 HOH A 24 324 24 HOH HOH . C 3 HOH A 25 325 25 HOH HOH . C 3 HOH A 26 326 26 HOH HOH . C 3 HOH A 27 327 27 HOH HOH . C 3 HOH A 28 328 28 HOH HOH . C 3 HOH A 29 329 29 HOH HOH . C 3 HOH A 30 330 30 HOH HOH . C 3 HOH A 31 331 31 HOH HOH . C 3 HOH A 32 332 32 HOH HOH . C 3 HOH A 33 333 33 HOH HOH . C 3 HOH A 34 334 34 HOH HOH . C 3 HOH A 35 335 35 HOH HOH . C 3 HOH A 36 336 36 HOH HOH . C 3 HOH A 37 337 37 HOH HOH . C 3 HOH A 38 338 38 HOH HOH . C 3 HOH A 39 339 39 HOH HOH . C 3 HOH A 40 340 40 HOH HOH . C 3 HOH A 41 341 41 HOH HOH . C 3 HOH A 42 342 43 HOH HOH . C 3 HOH A 43 343 44 HOH HOH . C 3 HOH A 44 344 45 HOH HOH . C 3 HOH A 45 345 46 HOH HOH . C 3 HOH A 46 346 47 HOH HOH . C 3 HOH A 47 347 48 HOH HOH . C 3 HOH A 48 348 49 HOH HOH . C 3 HOH A 49 349 50 HOH HOH . C 3 HOH A 50 350 52 HOH HOH . C 3 HOH A 51 351 54 HOH HOH . C 3 HOH A 52 352 55 HOH HOH . C 3 HOH A 53 353 56 HOH HOH . C 3 HOH A 54 354 57 HOH HOH . C 3 HOH A 55 355 58 HOH HOH . C 3 HOH A 56 356 59 HOH HOH . C 3 HOH A 57 357 60 HOH HOH . C 3 HOH A 58 358 62 HOH HOH . C 3 HOH A 59 359 63 HOH HOH . C 3 HOH A 60 360 64 HOH HOH . C 3 HOH A 61 361 65 HOH HOH . C 3 HOH A 62 362 66 HOH HOH . C 3 HOH A 63 363 67 HOH HOH . C 3 HOH A 64 364 68 HOH HOH . C 3 HOH A 65 365 69 HOH HOH . C 3 HOH A 66 366 70 HOH HOH . C 3 HOH A 67 367 71 HOH HOH . C 3 HOH A 68 368 72 HOH HOH . C 3 HOH A 69 369 74 HOH HOH . C 3 HOH A 70 370 75 HOH HOH . C 3 HOH A 71 371 76 HOH HOH . C 3 HOH A 72 372 77 HOH HOH . C 3 HOH A 73 373 78 HOH HOH . C 3 HOH A 74 374 79 HOH HOH . C 3 HOH A 75 375 80 HOH HOH . C 3 HOH A 76 376 81 HOH HOH . C 3 HOH A 77 377 82 HOH HOH . C 3 HOH A 78 378 83 HOH HOH . C 3 HOH A 79 379 84 HOH HOH . C 3 HOH A 80 380 85 HOH HOH . C 3 HOH A 81 381 86 HOH HOH . C 3 HOH A 82 382 89 HOH HOH . C 3 HOH A 83 383 90 HOH HOH . C 3 HOH A 84 384 91 HOH HOH . C 3 HOH A 85 385 92 HOH HOH . C 3 HOH A 86 386 93 HOH HOH . C 3 HOH A 87 387 94 HOH HOH . C 3 HOH A 88 388 96 HOH HOH . C 3 HOH A 89 389 97 HOH HOH . C 3 HOH A 90 390 98 HOH HOH . C 3 HOH A 91 391 99 HOH HOH . C 3 HOH A 92 392 100 HOH HOH . C 3 HOH A 93 393 101 HOH HOH . C 3 HOH A 94 394 102 HOH HOH . C 3 HOH A 95 395 103 HOH HOH . C 3 HOH A 96 396 104 HOH HOH . C 3 HOH A 97 397 105 HOH HOH . C 3 HOH A 98 398 106 HOH HOH . C 3 HOH A 99 399 107 HOH HOH . C 3 HOH A 100 400 108 HOH HOH . C 3 HOH A 101 401 109 HOH HOH . C 3 HOH A 102 402 110 HOH HOH . C 3 HOH A 103 403 111 HOH HOH . C 3 HOH A 104 404 112 HOH HOH . C 3 HOH A 105 405 113 HOH HOH . C 3 HOH A 106 406 114 HOH HOH . C 3 HOH A 107 407 115 HOH HOH . C 3 HOH A 108 408 116 HOH HOH . C 3 HOH A 109 409 117 HOH HOH . C 3 HOH A 110 410 118 HOH HOH . C 3 HOH A 111 411 119 HOH HOH . C 3 HOH A 112 412 120 HOH HOH . C 3 HOH A 113 413 122 HOH HOH . C 3 HOH A 114 414 123 HOH HOH . C 3 HOH A 115 415 124 HOH HOH . C 3 HOH A 116 416 126 HOH HOH . C 3 HOH A 117 417 128 HOH HOH . C 3 HOH A 118 418 132 HOH HOH . C 3 HOH A 119 419 133 HOH HOH . C 3 HOH A 120 420 134 HOH HOH . C 3 HOH A 121 421 136 HOH HOH . C 3 HOH A 122 422 137 HOH HOH . C 3 HOH A 123 423 141 HOH HOH . C 3 HOH A 124 424 150 HOH HOH . C 3 HOH A 125 425 151 HOH HOH . C 3 HOH A 126 426 152 HOH HOH . C 3 HOH A 127 427 154 HOH HOH . C 3 HOH A 128 428 155 HOH HOH . C 3 HOH A 129 429 156 HOH HOH . C 3 HOH A 130 430 157 HOH HOH . C 3 HOH A 131 431 160 HOH HOH . C 3 HOH A 132 432 164 HOH HOH . C 3 HOH A 133 433 165 HOH HOH . C 3 HOH A 134 434 166 HOH HOH . C 3 HOH A 135 435 167 HOH HOH . C 3 HOH A 136 436 169 HOH HOH . C 3 HOH A 137 437 170 HOH HOH . C 3 HOH A 138 438 172 HOH HOH . C 3 HOH A 139 439 174 HOH HOH . C 3 HOH A 140 440 175 HOH HOH . C 3 HOH A 141 441 177 HOH HOH . C 3 HOH A 142 442 179 HOH HOH . C 3 HOH A 143 443 181 HOH HOH . C 3 HOH A 144 444 182 HOH HOH . C 3 HOH A 145 445 184 HOH HOH . C 3 HOH A 146 446 185 HOH HOH . C 3 HOH A 147 447 186 HOH HOH . C 3 HOH A 148 448 187 HOH HOH . C 3 HOH A 149 449 188 HOH HOH . C 3 HOH A 150 450 189 HOH HOH . C 3 HOH A 151 451 190 HOH HOH . C 3 HOH A 152 452 191 HOH HOH . C 3 HOH A 153 453 192 HOH HOH . C 3 HOH A 154 454 193 HOH HOH . C 3 HOH A 155 455 194 HOH HOH . C 3 HOH A 156 456 195 HOH HOH . C 3 HOH A 157 457 196 HOH HOH . C 3 HOH A 158 458 197 HOH HOH . C 3 HOH A 159 459 198 HOH HOH . C 3 HOH A 160 460 199 HOH HOH . C 3 HOH A 161 461 200 HOH HOH . C 3 HOH A 162 462 201 HOH HOH . C 3 HOH A 163 463 202 HOH HOH . C 3 HOH A 164 464 203 HOH HOH . C 3 HOH A 165 465 204 HOH HOH . C 3 HOH A 166 466 205 HOH HOH . C 3 HOH A 167 467 206 HOH HOH . C 3 HOH A 168 468 207 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 219 . . . B 2 18.236 25.764 20.761 1 41.66 ? C1 219 300 A 1 HETATM 2 C C2 219 . . . B 2 18.314 24.464 20.174 1 39.95 ? C2 219 300 A 1 HETATM 3 C C3 219 . . . B 2 17.492 24.175 19.024 1 38.89 ? C3 219 300 A 1 HETATM 4 C C4 219 . . . B 2 16.56 25.125 18.441 1 36.55 ? C4 219 300 A 1 HETATM 5 C C5 219 . . . B 2 16.501 26.443 19.064 1 38.9 ? C5 219 300 A 1 HETATM 6 C C6 219 . . . B 2 17.365 26.748 20.192 1 40.12 ? C6 219 300 A 1 HETATM 7 C C7 219 . . . B 2 15.61 24.692 17.325 1 31.32 ? C7 219 300 A 1 HETATM 8 O O8 219 . . . B 2 15.403 27.361 18.734 1 39.03 ? O8 219 300 A 1 HETATM 9 P P9 219 . . . B 2 15.588 28.493 17.598 1 36.83 ? P9 219 300 A 1 HETATM 10 O O10 219 . . . B 2 16.978 28.073 17.157 1 34.64 ? O10 219 300 A 1 HETATM 11 O O11 219 . . . B 2 15.793 29.799 18.381 1 41.52 ? O11 219 300 A 1 HETATM 12 C C12 219 . . . B 2 17.091 27.652 15.836 1 32.38 ? C12 219 300 A 1 HETATM 13 O O17 219 . . . B 2 15.38 25.159 16.089 1 30.04 ? O17 219 300 A 1 HETATM 14 O O19 219 . . . B 2 14.47 28.64 16.597 1 25.13 ? O19 219 300 A 1 HETATM 15 C C21 219 . . . B 2 17.661 28.863 15.182 1 34.49 ? C21 219 300 A 1 HETATM 16 C C24 219 . . . B 2 19.127 28.476 14.887 1 36.25 ? C24 219 300 A 1 HETATM 17 C C25 219 . . . B 2 20.027 28.359 16.119 1 36.32 ? C25 219 300 A 1 HETATM 18 C C26 219 . . . B 2 20.167 29.711 16.798 1 37.84 ? C26 219 300 A 1 HETATM 19 C C27 219 . . . B 2 18.776 30.227 17.183 1 37.26 ? C27 219 300 A 1 HETATM 20 C C28 219 . . . B 2 17.684 30.162 16.104 1 37.29 ? C28 219 300 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 20 #