data_1O4P # _model_server_result.job_id L9K4uXWQsr-klHfcYwt0TA _model_server_result.datetime_utc '2024-11-06 09:29:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1o4p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":300}' # _entry.id 1O4P # _exptl.entry_id 1O4P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.157 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-PHENYLMALONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1O4P _cell.length_a 26.836 _cell.length_b 59.066 _cell.length_c 64.922 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1O4P _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C9 H8 O4' _chem_comp.formula_weight 180.157 _chem_comp.id 791 _chem_comp.mon_nstd_flag . _chem_comp.name '2-PHENYLMALONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms RU78191 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 791 doub 1 n y C1 C6 791 sing 2 n y C1 H1 791 sing 3 n n C2 C3 791 sing 4 n y C2 H2 791 sing 5 n n C3 C4 791 doub 6 n y C3 H3 791 sing 7 n n C4 C5 791 sing 8 n y C4 C12 791 sing 9 n n C5 C6 791 doub 10 n y C5 H5 791 sing 11 n n C6 H6 791 sing 12 n n C12 C13 791 sing 13 n n C12 C14 791 sing 14 n n C12 H12 791 sing 15 n n C13 O16 791 sing 16 n n C13 O17 791 doub 17 n n C14 O18 791 sing 18 n n C14 O19 791 doub 19 n n O16 H16 791 sing 20 n n O18 H18 791 sing 21 n n # _atom_sites.entry_id 1O4P _atom_sites.fract_transf_matrix[1][1] 0.037263 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01693 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015403 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 791 A 1 300 300 791 INH . C 3 HOH A 1 301 1 HOH HOH . C 3 HOH A 2 302 2 HOH HOH . C 3 HOH A 3 303 3 HOH HOH . C 3 HOH A 4 304 4 HOH HOH . C 3 HOH A 5 305 5 HOH HOH . C 3 HOH A 6 306 6 HOH HOH . C 3 HOH A 7 307 7 HOH HOH . C 3 HOH A 8 308 8 HOH HOH . C 3 HOH A 9 309 9 HOH HOH . C 3 HOH A 10 310 10 HOH HOH . C 3 HOH A 11 311 11 HOH HOH . C 3 HOH A 12 312 12 HOH HOH . C 3 HOH A 13 313 13 HOH HOH . C 3 HOH A 14 314 14 HOH HOH . C 3 HOH A 15 315 15 HOH HOH . C 3 HOH A 16 316 16 HOH HOH . C 3 HOH A 17 317 17 HOH HOH . C 3 HOH A 18 318 18 HOH HOH . C 3 HOH A 19 319 19 HOH HOH . C 3 HOH A 20 320 20 HOH HOH . C 3 HOH A 21 321 21 HOH HOH . C 3 HOH A 22 322 22 HOH HOH . C 3 HOH A 23 323 23 HOH HOH . C 3 HOH A 24 324 24 HOH HOH . C 3 HOH A 25 325 25 HOH HOH . C 3 HOH A 26 326 26 HOH HOH . C 3 HOH A 27 327 27 HOH HOH . C 3 HOH A 28 328 28 HOH HOH . C 3 HOH A 29 329 29 HOH HOH . C 3 HOH A 30 330 30 HOH HOH . C 3 HOH A 31 331 31 HOH HOH . C 3 HOH A 32 332 32 HOH HOH . C 3 HOH A 33 333 34 HOH HOH . C 3 HOH A 34 334 35 HOH HOH . C 3 HOH A 35 335 36 HOH HOH . C 3 HOH A 36 336 37 HOH HOH . C 3 HOH A 37 337 38 HOH HOH . C 3 HOH A 38 338 39 HOH HOH . C 3 HOH A 39 339 41 HOH HOH . C 3 HOH A 40 340 43 HOH HOH . C 3 HOH A 41 341 45 HOH HOH . C 3 HOH A 42 342 46 HOH HOH . C 3 HOH A 43 343 47 HOH HOH . C 3 HOH A 44 344 48 HOH HOH . C 3 HOH A 45 345 49 HOH HOH . C 3 HOH A 46 346 50 HOH HOH . C 3 HOH A 47 347 52 HOH HOH . C 3 HOH A 48 348 54 HOH HOH . C 3 HOH A 49 349 55 HOH HOH . C 3 HOH A 50 350 57 HOH HOH . C 3 HOH A 51 351 58 HOH HOH . C 3 HOH A 52 352 59 HOH HOH . C 3 HOH A 53 353 60 HOH HOH . C 3 HOH A 54 354 61 HOH HOH . C 3 HOH A 55 355 62 HOH HOH . C 3 HOH A 56 356 64 HOH HOH . C 3 HOH A 57 357 65 HOH HOH . C 3 HOH A 58 358 68 HOH HOH . C 3 HOH A 59 359 69 HOH HOH . C 3 HOH A 60 360 71 HOH HOH . C 3 HOH A 61 361 72 HOH HOH . C 3 HOH A 62 362 73 HOH HOH . C 3 HOH A 63 363 75 HOH HOH . C 3 HOH A 64 364 77 HOH HOH . C 3 HOH A 65 365 79 HOH HOH . C 3 HOH A 66 366 81 HOH HOH . C 3 HOH A 67 367 82 HOH HOH . C 3 HOH A 68 368 84 HOH HOH . C 3 HOH A 69 369 86 HOH HOH . C 3 HOH A 70 370 87 HOH HOH . C 3 HOH A 71 371 89 HOH HOH . C 3 HOH A 72 372 91 HOH HOH . C 3 HOH A 73 373 92 HOH HOH . C 3 HOH A 74 374 93 HOH HOH . C 3 HOH A 75 375 94 HOH HOH . C 3 HOH A 76 376 95 HOH HOH . C 3 HOH A 77 377 96 HOH HOH . C 3 HOH A 78 378 99 HOH HOH . C 3 HOH A 79 379 100 HOH HOH . C 3 HOH A 80 380 101 HOH HOH . C 3 HOH A 81 381 102 HOH HOH . C 3 HOH A 82 382 103 HOH HOH . C 3 HOH A 83 383 104 HOH HOH . C 3 HOH A 84 384 105 HOH HOH . C 3 HOH A 85 385 107 HOH HOH . C 3 HOH A 86 386 108 HOH HOH . C 3 HOH A 87 387 109 HOH HOH . C 3 HOH A 88 388 110 HOH HOH . C 3 HOH A 89 389 111 HOH HOH . C 3 HOH A 90 390 112 HOH HOH . C 3 HOH A 91 391 113 HOH HOH . C 3 HOH A 92 392 114 HOH HOH . C 3 HOH A 93 393 118 HOH HOH . C 3 HOH A 94 394 120 HOH HOH . C 3 HOH A 95 395 123 HOH HOH . C 3 HOH A 96 396 127 HOH HOH . C 3 HOH A 97 397 128 HOH HOH . C 3 HOH A 98 398 134 HOH HOH . C 3 HOH A 99 399 137 HOH HOH . C 3 HOH A 100 400 141 HOH HOH . C 3 HOH A 101 401 149 HOH HOH . C 3 HOH A 102 402 150 HOH HOH . C 3 HOH A 103 403 151 HOH HOH . C 3 HOH A 104 404 152 HOH HOH . C 3 HOH A 105 405 154 HOH HOH . C 3 HOH A 106 406 156 HOH HOH . C 3 HOH A 107 407 160 HOH HOH . C 3 HOH A 108 408 163 HOH HOH . C 3 HOH A 109 409 167 HOH HOH . C 3 HOH A 110 410 170 HOH HOH . C 3 HOH A 111 411 171 HOH HOH . C 3 HOH A 112 412 173 HOH HOH . C 3 HOH A 113 413 174 HOH HOH . C 3 HOH A 114 414 175 HOH HOH . C 3 HOH A 115 415 177 HOH HOH . C 3 HOH A 116 416 178 HOH HOH . C 3 HOH A 117 417 181 HOH HOH . C 3 HOH A 118 418 184 HOH HOH . C 3 HOH A 119 419 185 HOH HOH . C 3 HOH A 120 420 186 HOH HOH . C 3 HOH A 121 421 187 HOH HOH . C 3 HOH A 122 422 188 HOH HOH . C 3 HOH A 123 423 301 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 791 . . . B 2 18.395 24.618 19.617 1 29.57 ? C1 791 300 A 1 HETATM 2 C C2 791 . . . B 2 19.164 25.808 19.645 1 30.43 ? C2 791 300 A 1 HETATM 3 C C3 791 . . . B 2 18.711 27.013 19.024 1 30.99 ? C3 791 300 A 1 HETATM 4 C C4 791 . . . B 2 17.453 26.989 18.4 1 25.64 ? C4 791 300 A 1 HETATM 5 C C5 791 . . . B 2 16.706 25.786 18.407 1 27.26 ? C5 791 300 A 1 HETATM 6 C C6 791 . . . B 2 17.137 24.593 18.988 1 27.19 ? C6 791 300 A 1 HETATM 7 C C12 791 . . . B 2 16.857 28.154 17.664 1 23.52 ? C12 791 300 A 1 HETATM 8 C C13 791 . . . B 2 15.452 28.564 18.081 1 17.94 ? C13 791 300 A 1 HETATM 9 C C14 791 . . . B 2 17.4 28.622 16.302 1 24.12 ? C14 791 300 A 1 HETATM 10 O O16 791 . . . B 2 14.716 28.854 17.072 1 17.05 ? O16 791 300 A 1 HETATM 11 O O17 791 . . . B 2 15.202 28.736 19.204 1 18.46 ? O17 791 300 A 1 HETATM 12 O O18 791 . . . B 2 17.504 29.927 16.01 1 24.63 ? O18 791 300 A 1 HETATM 13 O O19 791 . . . B 2 17.555 27.764 15.598 1 22.54 ? O19 791 300 A 1 # _model_server_stats.io_time_ms 38 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 223 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #