data_1O5A
#
_model_server_result.job_id            pSsPV34d9v72Z_3dODbzGA 
_model_server_result.datetime_utc      '2024-11-30 08:51:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1o5a 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":2}' 
#
_entry.id    1O5A 
#
_exptl.entry_id    1O5A 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              192.124 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CITRIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          113.41 
_cell.angle_gamma         90 
_cell.entry_id            1O5A 
_cell.length_a            81.78 
_cell.length_b            49.87 
_cell.length_c            66.74 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1O5A 
_symmetry.cell_setting             monoclinic 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 13 A CYS 13 1_555 B SG CYS 121 B CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? 
disulf ? disulf2 B SG CYS 31 B CYS 42 1_555 B SG CYS 47 B CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
disulf ? disulf3 B SG CYS 39 B CYS 50 1_555 B SG CYS 110 B CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf4 B SG CYS 135 B CYS 136 1_555 B SG CYS 204 B CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
disulf ? disulf5 B SG CYS 167 B CYS 168 1_555 B SG CYS 183 B CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? 
disulf ? disulf6 B SG CYS 194 B CYS 191 1_555 B SG CYS 222 B CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
#
_chem_comp.formula           'C6 H8 O7' 
_chem_comp.formula_weight    192.124 
_chem_comp.id                CIT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CITRIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 CIT doub 115 n n 
C1 O2 CIT sing 116 n n 
C1 C2 CIT sing 117 n n 
O2 HO2 CIT sing 118 n n 
C2 C3 CIT sing 119 n n 
C2 H21 CIT sing 120 n n 
C2 H22 CIT sing 121 n n 
C3 O7 CIT sing 122 n n 
C3 C4 CIT sing 123 n n 
C3 C6 CIT sing 124 n n 
O7 HO7 CIT sing 125 n n 
C4 C5 CIT sing 126 n n 
C4 H41 CIT sing 127 n n 
C4 H42 CIT sing 128 n n 
C5 O3 CIT doub 129 n n 
C5 O4 CIT sing 130 n n 
O4 HO4 CIT sing 131 n n 
C6 O5 CIT doub 132 n n 
C6 O6 CIT sing 133 n n 
O6 HO6 CIT sing 134 n n 
#
_atom_sites.entry_id                     1O5A 
_atom_sites.fract_transf_matrix[1][1]    0.012228 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005294 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020052 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016328 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 696 B 1 251 246 696 696 . 
D 4 CIT B 1 2 2 CIT CIT . 
E 5 HOH A 1 129 129 HOH HOH . 
E 5 HOH A 2 467 467 HOH HOH . 
E 5 HOH A 3 715 715 HOH HOH . 
E 5 HOH A 4 721 721 HOH HOH . 
E 5 HOH A 5 1109 1109 HOH HOH . 
E 5 HOH A 6 1402 1402 HOH HOH . 
F 5 HOH B 1 252 21 HOH HOH . 
F 5 HOH B 2 253 22 HOH HOH . 
F 5 HOH B 3 254 24 HOH HOH . 
F 5 HOH B 4 255 27 HOH HOH . 
F 5 HOH B 5 256 31 HOH HOH . 
F 5 HOH B 6 257 33 HOH HOH . 
F 5 HOH B 7 258 35 HOH HOH . 
F 5 HOH B 8 259 36 HOH HOH . 
F 5 HOH B 9 260 41 HOH HOH . 
F 5 HOH B 10 261 45 HOH HOH . 
F 5 HOH B 11 262 46 HOH HOH . 
F 5 HOH B 12 263 51 HOH HOH . 
F 5 HOH B 13 264 53 HOH HOH . 
F 5 HOH B 14 265 54 HOH HOH . 
F 5 HOH B 15 266 56 HOH HOH . 
F 5 HOH B 16 267 58 HOH HOH . 
F 5 HOH B 17 268 59 HOH HOH . 
F 5 HOH B 18 269 68 HOH HOH . 
F 5 HOH B 19 270 72 HOH HOH . 
F 5 HOH B 20 271 73 HOH HOH . 
F 5 HOH B 21 272 75 HOH HOH . 
F 5 HOH B 22 273 77 HOH HOH . 
F 5 HOH B 23 274 78 HOH HOH . 
F 5 HOH B 24 275 79 HOH HOH . 
F 5 HOH B 25 276 97 HOH HOH . 
F 5 HOH B 26 277 99 HOH HOH . 
F 5 HOH B 27 278 100 HOH HOH . 
F 5 HOH B 28 279 102 HOH HOH . 
F 5 HOH B 29 280 107 HOH HOH . 
F 5 HOH B 30 281 118 HOH HOH . 
F 5 HOH B 31 282 119 HOH HOH . 
F 5 HOH B 32 283 120 HOH HOH . 
F 5 HOH B 33 284 126 HOH HOH . 
F 5 HOH B 34 285 138 HOH HOH . 
F 5 HOH B 35 286 139 HOH HOH . 
F 5 HOH B 36 287 140 HOH HOH . 
F 5 HOH B 37 288 142 HOH HOH . 
F 5 HOH B 38 289 146 HOH HOH . 
F 5 HOH B 39 290 150 HOH HOH . 
F 5 HOH B 40 291 163 HOH HOH . 
F 5 HOH B 41 292 172 HOH HOH . 
F 5 HOH B 42 293 281 HOH HOH . 
F 5 HOH B 43 294 306 HOH HOH . 
F 5 HOH B 44 295 314 HOH HOH . 
F 5 HOH B 45 296 315 HOH HOH . 
F 5 HOH B 46 297 316 HOH HOH . 
F 5 HOH B 47 298 329 HOH HOH . 
F 5 HOH B 48 299 355 HOH HOH . 
F 5 HOH B 49 300 373 HOH HOH . 
F 5 HOH B 50 301 377 HOH HOH . 
F 5 HOH B 51 302 378 HOH HOH . 
F 5 HOH B 52 303 383 HOH HOH . 
F 5 HOH B 53 304 391 HOH HOH . 
F 5 HOH B 54 305 417 HOH HOH . 
F 5 HOH B 55 306 446 HOH HOH . 
F 5 HOH B 56 307 468 HOH HOH . 
F 5 HOH B 57 308 471 HOH HOH . 
F 5 HOH B 58 309 473 HOH HOH . 
F 5 HOH B 59 310 497 HOH HOH . 
F 5 HOH B 60 311 515 HOH HOH . 
F 5 HOH B 61 312 524 HOH HOH . 
F 5 HOH B 62 313 532 HOH HOH . 
F 5 HOH B 63 314 550 HOH HOH . 
F 5 HOH B 64 315 555 HOH HOH . 
F 5 HOH B 65 316 572 HOH HOH . 
F 5 HOH B 66 317 579 HOH HOH . 
F 5 HOH B 67 318 592 HOH HOH . 
F 5 HOH B 68 319 597 HOH HOH . 
F 5 HOH B 69 320 599 HOH HOH . 
F 5 HOH B 70 321 602 HOH HOH . 
F 5 HOH B 71 322 610 HOH HOH . 
F 5 HOH B 72 323 628 HOH HOH . 
F 5 HOH B 73 324 633 HOH HOH . 
F 5 HOH B 74 325 635 HOH HOH . 
F 5 HOH B 75 326 636 HOH HOH . 
F 5 HOH B 76 327 639 HOH HOH . 
F 5 HOH B 77 328 647 HOH HOH . 
F 5 HOH B 78 329 649 HOH HOH . 
F 5 HOH B 79 330 650 HOH HOH . 
F 5 HOH B 80 331 655 HOH HOH . 
F 5 HOH B 81 332 662 HOH HOH . 
F 5 HOH B 82 333 677 HOH HOH . 
F 5 HOH B 83 334 678 HOH HOH . 
F 5 HOH B 84 335 701 HOH HOH . 
F 5 HOH B 85 336 718 HOH HOH . 
F 5 HOH B 86 337 748 HOH HOH . 
F 5 HOH B 87 338 753 HOH HOH . 
F 5 HOH B 88 339 754 HOH HOH . 
F 5 HOH B 89 340 755 HOH HOH . 
F 5 HOH B 90 341 758 HOH HOH . 
F 5 HOH B 91 342 806 HOH HOH . 
F 5 HOH B 92 343 849 HOH HOH . 
F 5 HOH B 93 344 850 HOH HOH . 
F 5 HOH B 94 345 881 HOH HOH . 
F 5 HOH B 95 346 910 HOH HOH . 
F 5 HOH B 96 347 911 HOH HOH . 
F 5 HOH B 97 348 912 HOH HOH . 
F 5 HOH B 98 349 931 HOH HOH . 
F 5 HOH B 99 350 933 HOH HOH . 
F 5 HOH B 100 351 935 HOH HOH . 
F 5 HOH B 101 352 936 HOH HOH . 
F 5 HOH B 102 353 937 HOH HOH . 
F 5 HOH B 103 354 939 HOH HOH . 
F 5 HOH B 104 355 941 HOH HOH . 
F 5 HOH B 105 356 964 HOH HOH . 
F 5 HOH B 106 357 966 HOH HOH . 
F 5 HOH B 107 358 968 HOH HOH . 
F 5 HOH B 108 359 972 HOH HOH . 
F 5 HOH B 109 360 984 HOH HOH . 
F 5 HOH B 110 361 987 HOH HOH . 
F 5 HOH B 111 362 990 HOH HOH . 
F 5 HOH B 112 363 991 HOH HOH . 
F 5 HOH B 113 364 1021 HOH HOH . 
F 5 HOH B 114 365 1022 HOH HOH . 
F 5 HOH B 115 366 1043 HOH HOH . 
F 5 HOH B 116 367 1044 HOH HOH . 
F 5 HOH B 117 368 1045 HOH HOH . 
F 5 HOH B 118 369 1046 HOH HOH . 
F 5 HOH B 119 370 1048 HOH HOH . 
F 5 HOH B 120 371 1051 HOH HOH . 
F 5 HOH B 121 372 1057 HOH HOH . 
F 5 HOH B 122 373 1063 HOH HOH . 
F 5 HOH B 123 374 1076 HOH HOH . 
F 5 HOH B 124 375 1091 HOH HOH . 
F 5 HOH B 125 376 1110 HOH HOH . 
F 5 HOH B 126 377 1121 HOH HOH . 
F 5 HOH B 127 378 1136 HOH HOH . 
F 5 HOH B 128 379 1150 HOH HOH . 
F 5 HOH B 129 380 1161 HOH HOH . 
F 5 HOH B 130 381 1169 HOH HOH . 
F 5 HOH B 131 382 1171 HOH HOH . 
F 5 HOH B 132 383 1173 HOH HOH . 
F 5 HOH B 133 384 1206 HOH HOH . 
F 5 HOH B 134 385 1224 HOH HOH . 
F 5 HOH B 135 386 1244 HOH HOH . 
F 5 HOH B 136 387 1259 HOH HOH . 
F 5 HOH B 137 388 1279 HOH HOH . 
F 5 HOH B 138 389 1281 HOH HOH . 
F 5 HOH B 139 390 1293 HOH HOH . 
F 5 HOH B 140 391 1310 HOH HOH . 
F 5 HOH B 141 392 1330 HOH HOH . 
F 5 HOH B 142 393 1339 HOH HOH . 
F 5 HOH B 143 394 1340 HOH HOH . 
F 5 HOH B 144 395 1341 HOH HOH . 
F 5 HOH B 145 396 1342 HOH HOH . 
F 5 HOH B 146 397 1343 HOH HOH . 
F 5 HOH B 147 398 1347 HOH HOH . 
F 5 HOH B 148 399 1353 HOH HOH . 
F 5 HOH B 149 400 1356 HOH HOH . 
F 5 HOH B 150 401 1358 HOH HOH . 
F 5 HOH B 151 402 1363 HOH HOH . 
F 5 HOH B 152 403 1367 HOH HOH . 
F 5 HOH B 153 404 1370 HOH HOH . 
F 5 HOH B 154 405 1372 HOH HOH . 
F 5 HOH B 155 406 1375 HOH HOH . 
F 5 HOH B 156 407 1377 HOH HOH . 
F 5 HOH B 157 408 1378 HOH HOH . 
F 5 HOH B 158 409 1379 HOH HOH . 
F 5 HOH B 159 410 1385 HOH HOH . 
F 5 HOH B 160 411 1388 HOH HOH . 
F 5 HOH B 161 412 1393 HOH HOH . 
F 5 HOH B 162 413 1394 HOH HOH . 
F 5 HOH B 163 414 1401 HOH HOH . 
F 5 HOH B 164 415 1410 HOH HOH . 
F 5 HOH B 165 416 1418 HOH HOH . 
F 5 HOH B 166 417 1421 HOH HOH . 
F 5 HOH B 167 418 1430 HOH HOH . 
F 5 HOH B 168 419 1446 HOH HOH . 
F 5 HOH B 169 420 1450 HOH HOH . 
F 5 HOH B 170 421 1455 HOH HOH . 
F 5 HOH B 171 422 1465 HOH HOH . 
F 5 HOH B 172 423 1473 HOH HOH . 
F 5 HOH B 173 424 1483 HOH HOH . 
F 5 HOH B 174 425 1494 HOH HOH . 
F 5 HOH B 175 426 1495 HOH HOH . 
F 5 HOH B 176 427 1496 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 CIT . . . D 4 35.646 13.729 10.346 1 44.26 ? C1 CIT 2 B 1 
HETATM 2 O O1 CIT . . . D 4 35.138 12.621 10.319 1 50.48 ? O1 CIT 2 B 1 
HETATM 3 O O2 CIT . . . D 4 36.716 14.009 9.828 1 54.16 ? O2 CIT 2 B 1 
HETATM 4 C C2 CIT . . . D 4 34.874 14.875 11.087 1 43.03 ? C2 CIT 2 B 1 
HETATM 5 C C3 CIT . . . D 4 35.276 15.06 12.595 1 40.13 ? C3 CIT 2 B 1 
HETATM 6 O O7 CIT . . . D 4 34.894 13.866 13.24 1 33.65 ? O7 CIT 2 B 1 
HETATM 7 C C4 CIT . . . D 4 34.379 16.107 13.35 1 42.59 ? C4 CIT 2 B 1 
HETATM 8 C C5 CIT . . . D 4 32.86 15.858 13.125 1 46.44 ? C5 CIT 2 B 1 
HETATM 9 O O3 CIT . . . D 4 32.345 14.86 13.602 1 46.97 ? O3 CIT 2 B 1 
HETATM 10 O O4 CIT . . . D 4 32.274 16.697 12.47 1 52 ? O4 CIT 2 B 1 
HETATM 11 C C6 CIT . . . D 4 36.769 15.326 12.698 1 37.18 ? C6 CIT 2 B 1 
HETATM 12 O O5 CIT . . . D 4 37.237 16.613 12.904 1 42.65 ? O5 CIT 2 B 1 
HETATM 13 O O6 CIT . . . D 4 37.505 14.373 12.593 1 42.93 ? O6 CIT 2 B 1 
HETATM 14 H H21 CIT . . . D 4 35.062 15.802 10.566 1 42.8 ? H21 CIT 2 B 1 
HETATM 15 H H22 CIT . . . D 4 33.815 14.672 11.017 1 43.25 ? H22 CIT 2 B 1 
HETATM 16 H HO7 CIT . . . D 4 33.947 13.899 13.007 1 35.61 ? HO7 CIT 2 B 1 
HETATM 17 H H41 CIT . . . D 4 34.577 16.061 14.411 1 44.23 ? H41 CIT 2 B 1 
HETATM 18 H H42 CIT . . . D 4 34.619 17.102 13.014 1 44.28 ? H42 CIT 2 B 1 
#
_model_server_stats.io_time_ms              57 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           338 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           18 
#