data_1O5C # _model_server_result.job_id IvyFUKjNyMTANyTbcIm2pQ _model_server_result.datetime_utc '2024-12-27 17:15:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1o5c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":2}' # _entry.id 1O5C # _exptl.entry_id 1O5C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 113.04 _cell.angle_gamma 90 _cell.entry_id 1O5C _cell.length_a 81.71 _cell.length_b 50.28 _cell.length_c 66.2 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1O5C _symmetry.cell_setting monoclinic _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 13 A CYS 13 1_555 B SG CYS 121 B CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? disulf ? disulf2 B SG CYS 31 B CYS 42 1_555 B SG CYS 47 B CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf3 B SG CYS 39 B CYS 50 1_555 B SG CYS 110 B CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf4 B SG CYS 135 B CYS 136 1_555 B SG CYS 204 B CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? disulf ? disulf5 B SG CYS 167 B CYS 168 1_555 B SG CYS 183 B CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf6 B SG CYS 194 B CYS 191 1_555 B SG CYS 222 B CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 1O5C _atom_sites.fract_transf_matrix[1][1] 0.012238 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005205 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019889 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016415 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CR9 B 1 251 246 CR9 CR9 . D 4 CIT B 1 1 1 CIT CIT . E 4 CIT B 1 2 2 CIT CIT . F 5 HOH A 1 467 467 HOH HOH . F 5 HOH A 2 679 679 HOH HOH . F 5 HOH A 3 715 715 HOH HOH . F 5 HOH A 4 1065 1065 HOH HOH . F 5 HOH A 5 1072 1072 HOH HOH . F 5 HOH A 6 1094 1094 HOH HOH . F 5 HOH A 7 1111 1111 HOH HOH . F 5 HOH A 8 1117 1117 HOH HOH . G 5 HOH B 1 252 4 HOH HOH . G 5 HOH B 2 253 5 HOH HOH . G 5 HOH B 3 254 6 HOH HOH . G 5 HOH B 4 255 21 HOH HOH . G 5 HOH B 5 256 22 HOH HOH . G 5 HOH B 6 257 24 HOH HOH . G 5 HOH B 7 258 27 HOH HOH . G 5 HOH B 8 259 35 HOH HOH . G 5 HOH B 9 260 36 HOH HOH . G 5 HOH B 10 261 37 HOH HOH . G 5 HOH B 11 262 45 HOH HOH . G 5 HOH B 12 263 46 HOH HOH . G 5 HOH B 13 264 47 HOH HOH . G 5 HOH B 14 265 50 HOH HOH . G 5 HOH B 15 266 51 HOH HOH . G 5 HOH B 16 267 54 HOH HOH . G 5 HOH B 17 268 56 HOH HOH . G 5 HOH B 18 269 58 HOH HOH . G 5 HOH B 19 270 59 HOH HOH . G 5 HOH B 20 271 68 HOH HOH . G 5 HOH B 21 272 69 HOH HOH . G 5 HOH B 22 273 73 HOH HOH . G 5 HOH B 23 274 75 HOH HOH . G 5 HOH B 24 275 77 HOH HOH . G 5 HOH B 25 276 97 HOH HOH . G 5 HOH B 26 277 99 HOH HOH . G 5 HOH B 27 278 100 HOH HOH . G 5 HOH B 28 279 102 HOH HOH . G 5 HOH B 29 280 120 HOH HOH . G 5 HOH B 30 281 126 HOH HOH . G 5 HOH B 31 282 138 HOH HOH . G 5 HOH B 32 283 139 HOH HOH . G 5 HOH B 33 284 140 HOH HOH . G 5 HOH B 34 285 150 HOH HOH . G 5 HOH B 35 286 172 HOH HOH . G 5 HOH B 36 287 223 HOH HOH . G 5 HOH B 37 288 281 HOH HOH . G 5 HOH B 38 289 285 HOH HOH . G 5 HOH B 39 290 293 HOH HOH . G 5 HOH B 40 291 315 HOH HOH . G 5 HOH B 41 292 316 HOH HOH . G 5 HOH B 42 293 319 HOH HOH . G 5 HOH B 43 294 329 HOH HOH . G 5 HOH B 44 295 342 HOH HOH . G 5 HOH B 45 296 355 HOH HOH . G 5 HOH B 46 297 373 HOH HOH . G 5 HOH B 47 298 376 HOH HOH . G 5 HOH B 48 299 377 HOH HOH . G 5 HOH B 49 300 383 HOH HOH . G 5 HOH B 50 301 399 HOH HOH . G 5 HOH B 51 302 401 HOH HOH . G 5 HOH B 52 303 412 HOH HOH . G 5 HOH B 53 304 415 HOH HOH . G 5 HOH B 54 305 418 HOH HOH . G 5 HOH B 55 306 456 HOH HOH . G 5 HOH B 56 307 460 HOH HOH . G 5 HOH B 57 308 468 HOH HOH . G 5 HOH B 58 309 471 HOH HOH . G 5 HOH B 59 310 473 HOH HOH . G 5 HOH B 60 311 497 HOH HOH . G 5 HOH B 61 312 515 HOH HOH . G 5 HOH B 62 313 524 HOH HOH . G 5 HOH B 63 314 532 HOH HOH . G 5 HOH B 64 315 555 HOH HOH . G 5 HOH B 65 316 572 HOH HOH . G 5 HOH B 66 317 579 HOH HOH . G 5 HOH B 67 318 585 HOH HOH . G 5 HOH B 68 319 592 HOH HOH . G 5 HOH B 69 320 596 HOH HOH . G 5 HOH B 70 321 597 HOH HOH . G 5 HOH B 71 322 598 HOH HOH . G 5 HOH B 72 323 599 HOH HOH . G 5 HOH B 73 324 602 HOH HOH . G 5 HOH B 74 325 603 HOH HOH . G 5 HOH B 75 326 605 HOH HOH . G 5 HOH B 76 327 610 HOH HOH . G 5 HOH B 77 328 628 HOH HOH . G 5 HOH B 78 329 633 HOH HOH . G 5 HOH B 79 330 635 HOH HOH . G 5 HOH B 80 331 636 HOH HOH . G 5 HOH B 81 332 639 HOH HOH . G 5 HOH B 82 333 647 HOH HOH . G 5 HOH B 83 334 649 HOH HOH . G 5 HOH B 84 335 650 HOH HOH . G 5 HOH B 85 336 661 HOH HOH . G 5 HOH B 86 337 662 HOH HOH . G 5 HOH B 87 338 677 HOH HOH . G 5 HOH B 88 339 678 HOH HOH . G 5 HOH B 89 340 701 HOH HOH . G 5 HOH B 90 341 718 HOH HOH . G 5 HOH B 91 342 748 HOH HOH . G 5 HOH B 92 343 753 HOH HOH . G 5 HOH B 93 344 754 HOH HOH . G 5 HOH B 94 345 758 HOH HOH . G 5 HOH B 95 346 766 HOH HOH . G 5 HOH B 96 347 781 HOH HOH . G 5 HOH B 97 348 807 HOH HOH . G 5 HOH B 98 349 851 HOH HOH . G 5 HOH B 99 350 852 HOH HOH . G 5 HOH B 100 351 893 HOH HOH . G 5 HOH B 101 352 904 HOH HOH . G 5 HOH B 102 353 911 HOH HOH . G 5 HOH B 103 354 914 HOH HOH . G 5 HOH B 104 355 931 HOH HOH . G 5 HOH B 105 356 934 HOH HOH . G 5 HOH B 106 357 946 HOH HOH . G 5 HOH B 107 358 953 HOH HOH . G 5 HOH B 108 359 960 HOH HOH . G 5 HOH B 109 360 965 HOH HOH . G 5 HOH B 110 361 969 HOH HOH . G 5 HOH B 111 362 970 HOH HOH . G 5 HOH B 112 363 982 HOH HOH . G 5 HOH B 113 364 983 HOH HOH . G 5 HOH B 114 365 989 HOH HOH . G 5 HOH B 115 366 990 HOH HOH . G 5 HOH B 116 367 992 HOH HOH . G 5 HOH B 117 368 1013 HOH HOH . G 5 HOH B 118 369 1018 HOH HOH . G 5 HOH B 119 370 1023 HOH HOH . G 5 HOH B 120 371 1047 HOH HOH . G 5 HOH B 121 372 1048 HOH HOH . G 5 HOH B 122 373 1049 HOH HOH . G 5 HOH B 123 374 1050 HOH HOH . G 5 HOH B 124 375 1051 HOH HOH . G 5 HOH B 125 376 1052 HOH HOH . G 5 HOH B 126 377 1053 HOH HOH . G 5 HOH B 127 378 1054 HOH HOH . G 5 HOH B 128 379 1055 HOH HOH . G 5 HOH B 129 380 1056 HOH HOH . G 5 HOH B 130 381 1057 HOH HOH . G 5 HOH B 131 382 1059 HOH HOH . G 5 HOH B 132 383 1061 HOH HOH . G 5 HOH B 133 384 1062 HOH HOH . G 5 HOH B 134 385 1069 HOH HOH . G 5 HOH B 135 386 1070 HOH HOH . G 5 HOH B 136 387 1073 HOH HOH . G 5 HOH B 137 388 1074 HOH HOH . G 5 HOH B 138 389 1075 HOH HOH . G 5 HOH B 139 390 1077 HOH HOH . G 5 HOH B 140 391 1080 HOH HOH . G 5 HOH B 141 392 1082 HOH HOH . G 5 HOH B 142 393 1087 HOH HOH . G 5 HOH B 143 394 1088 HOH HOH . G 5 HOH B 144 395 1090 HOH HOH . G 5 HOH B 145 396 1092 HOH HOH . G 5 HOH B 146 397 1096 HOH HOH . G 5 HOH B 147 398 1097 HOH HOH . G 5 HOH B 148 399 1099 HOH HOH . G 5 HOH B 149 400 1101 HOH HOH . G 5 HOH B 150 401 1102 HOH HOH . G 5 HOH B 151 402 1108 HOH HOH . G 5 HOH B 152 403 1109 HOH HOH . G 5 HOH B 153 404 1110 HOH HOH . G 5 HOH B 154 405 1116 HOH HOH . G 5 HOH B 155 406 1118 HOH HOH . G 5 HOH B 156 407 1124 HOH HOH . G 5 HOH B 157 408 1126 HOH HOH . G 5 HOH B 158 409 1130 HOH HOH . G 5 HOH B 159 410 1134 HOH HOH . G 5 HOH B 160 411 1135 HOH HOH . G 5 HOH B 161 412 1136 HOH HOH . G 5 HOH B 162 413 1140 HOH HOH . G 5 HOH B 163 414 1141 HOH HOH . G 5 HOH B 164 415 1142 HOH HOH . G 5 HOH B 165 416 1147 HOH HOH . G 5 HOH B 166 417 1149 HOH HOH . G 5 HOH B 167 418 1150 HOH HOH . G 5 HOH B 168 419 1158 HOH HOH . G 5 HOH B 169 420 1161 HOH HOH . G 5 HOH B 170 421 1167 HOH HOH . G 5 HOH B 171 422 1168 HOH HOH . G 5 HOH B 172 423 1170 HOH HOH . G 5 HOH B 173 424 1173 HOH HOH . G 5 HOH B 174 425 1174 HOH HOH . G 5 HOH B 175 426 1179 HOH HOH . G 5 HOH B 176 427 1181 HOH HOH . G 5 HOH B 177 428 1182 HOH HOH . G 5 HOH B 178 429 1186 HOH HOH . G 5 HOH B 179 430 1189 HOH HOH . G 5 HOH B 180 431 1193 HOH HOH . G 5 HOH B 181 432 1195 HOH HOH . G 5 HOH B 182 433 1221 HOH HOH . G 5 HOH B 183 434 1227 HOH HOH . G 5 HOH B 184 435 1231 HOH HOH . G 5 HOH B 185 436 1237 HOH HOH . G 5 HOH B 186 437 1238 HOH HOH . G 5 HOH B 187 438 1240 HOH HOH . G 5 HOH B 188 439 1243 HOH HOH . G 5 HOH B 189 440 1244 HOH HOH . G 5 HOH B 190 441 1251 HOH HOH . G 5 HOH B 191 442 1254 HOH HOH . G 5 HOH B 192 443 1259 HOH HOH . G 5 HOH B 193 444 1262 HOH HOH . G 5 HOH B 194 445 1265 HOH HOH . G 5 HOH B 195 446 1279 HOH HOH . G 5 HOH B 196 447 1280 HOH HOH . G 5 HOH B 197 448 1281 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . E 4 35.598 13.476 10.248 1 32.62 ? C1 CIT 2 B 1 HETATM 2 O O1 CIT . . . E 4 34.776 12.657 9.837 1 36.23 ? O1 CIT 2 B 1 HETATM 3 O O2 CIT . . . E 4 36.802 13.379 10.108 1 31.23 ? O2 CIT 2 B 1 HETATM 4 C C2 CIT . . . E 4 35.101 14.747 10.994 1 30.76 ? C2 CIT 2 B 1 HETATM 5 C C3 CIT . . . E 4 35.388 14.828 12.545 1 30.74 ? C3 CIT 2 B 1 HETATM 6 O O7 CIT . . . E 4 34.925 13.638 13.148 1 26.56 ? O7 CIT 2 B 1 HETATM 7 C C4 CIT . . . E 4 34.461 15.963 13.165 1 34.4 ? C4 CIT 2 B 1 HETATM 8 C C5 CIT . . . E 4 32.915 15.819 12.839 1 38.6 ? C5 CIT 2 B 1 HETATM 9 O O3 CIT . . . E 4 32.42 16.577 12.016 1 43.95 ? O3 CIT 2 B 1 HETATM 10 O O4 CIT . . . E 4 32.266 14.961 13.416 1 36.24 ? O4 CIT 2 B 1 HETATM 11 C C6 CIT . . . E 4 36.869 15.053 12.92 1 31.32 ? C6 CIT 2 B 1 HETATM 12 O O5 CIT . . . E 4 37.459 15.951 12.332 1 33.3 ? O5 CIT 2 B 1 HETATM 13 O O6 CIT . . . E 4 37.341 14.309 13.785 1 36.03 ? O6 CIT 2 B 1 HETATM 14 H H21 CIT . . . E 4 35.564 15.605 10.531 1 31.81 ? H21 CIT 2 B 1 HETATM 15 H H22 CIT . . . E 4 34.041 14.829 10.819 1 30.29 ? H22 CIT 2 B 1 HETATM 16 H HO7 CIT . . . E 4 33.98 13.819 13.041 1 31.17 ? HO7 CIT 2 B 1 HETATM 17 H H41 CIT . . . E 4 34.581 15.973 14.238 1 35.12 ? H41 CIT 2 B 1 HETATM 18 H H42 CIT . . . E 4 34.801 16.911 12.785 1 34.56 ? H42 CIT 2 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 18 #