data_1O5G # _model_server_result.job_id TXf08EfRvmEOowJqTnTDjQ _model_server_result.datetime_utc '2024-12-27 00:46:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1o5g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":392}' # _entry.id 1O5G # _exptl.entry_id 1O5G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.83 _cell.angle_gamma 90 _cell.entry_id 1O5G _cell.length_a 71.34 _cell.length_b 72.04 _cell.length_c 72.95 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1O5G _symmetry.cell_setting monoclinic _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 9 L CYS 1 1_555 B SG CYS 119 H CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? disulf ? disulf2 B SG CYS 28 H CYS 42 1_555 B SG CYS 44 H CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 B SG CYS 173 H CYS 168 1_555 B SG CYS 187 H CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf4 B SG CYS 201 H CYS 191 1_555 B SG CYS 231 H CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? covale ? covale1 C C GLU 8 I GLU 62 1_555 C N TYS 9 I TYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.306 ? covale ? covale2 C C TYS 9 I TYS 63 1_555 C N LEU 10 I LEU 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.293 ? metalc ? metalc1 B O PHE 215 H PHE 204 1_555 E CA CA . H CA 392 1_555 A ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc2 B O ARG 233 H ARG 221 1_555 D NA NA . H NA 391 1_555 A ? ? ? ? ? ? ? ? ? ? ? 2.477 ? metalc ? metalc3 B O LYS 236 H LYS 224 1_555 D NA NA . H NA 391 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? metalc ? metalc4 D NA NA . H NA 391 1_555 H O HOH . H HOH 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.668 ? metalc ? metalc5 D NA NA . H NA 391 1_555 H O HOH . H HOH 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.962 ? metalc ? metalc6 D NA NA . H NA 391 1_555 H O HOH . H HOH 431 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.589 ? metalc ? metalc7 D NA NA . H NA 391 1_555 H O HOH . H HOH 433 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.54 ? metalc ? metalc8 E CA CA . H CA 392 1_555 H O HOH . H HOH 424 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? metalc ? metalc9 E CA CA . H CA 392 1_555 H O HOH . H HOH 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? metalc ? metalc10 E CA CA . H CA 392 1_555 H O HOH . H HOH 484 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1O5G _atom_sites.fract_transf_matrix[1][1] 0.014017 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002682 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013881 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013957 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NA H 1 391 391 NA NA . E 5 CA H 1 392 392 CA CA . F 6 CR9 H 1 393 246 CR9 CR9 . G 7 HOH L 1 439 439 HOH HOH . G 7 HOH L 2 440 440 HOH HOH . G 7 HOH L 3 449 449 HOH HOH . G 7 HOH L 4 485 485 HOH HOH . G 7 HOH L 5 534 534 HOH HOH . G 7 HOH L 6 599 599 HOH HOH . G 7 HOH L 7 700 700 HOH HOH . G 7 HOH L 8 739 739 HOH HOH . G 7 HOH L 9 1424 1424 HOH HOH . H 7 HOH H 1 394 393 HOH HOH . H 7 HOH H 2 395 394 HOH HOH . H 7 HOH H 3 396 395 HOH HOH . H 7 HOH H 4 397 401 HOH HOH . H 7 HOH H 5 398 402 HOH HOH . H 7 HOH H 6 399 403 HOH HOH . H 7 HOH H 7 400 404 HOH HOH . H 7 HOH H 8 401 405 HOH HOH . H 7 HOH H 9 402 406 HOH HOH . H 7 HOH H 10 403 407 HOH HOH . H 7 HOH H 11 404 408 HOH HOH . H 7 HOH H 12 405 410 HOH HOH . H 7 HOH H 13 406 411 HOH HOH . H 7 HOH H 14 407 412 HOH HOH . H 7 HOH H 15 408 413 HOH HOH . H 7 HOH H 16 409 414 HOH HOH . H 7 HOH H 17 410 415 HOH HOH . H 7 HOH H 18 411 416 HOH HOH . H 7 HOH H 19 412 417 HOH HOH . H 7 HOH H 20 413 418 HOH HOH . H 7 HOH H 21 414 419 HOH HOH . H 7 HOH H 22 415 420 HOH HOH . H 7 HOH H 23 416 421 HOH HOH . H 7 HOH H 24 417 423 HOH HOH . H 7 HOH H 25 418 425 HOH HOH . H 7 HOH H 26 419 426 HOH HOH . H 7 HOH H 27 420 427 HOH HOH . H 7 HOH H 28 421 428 HOH HOH . H 7 HOH H 29 422 430 HOH HOH . H 7 HOH H 30 423 431 HOH HOH . H 7 HOH H 31 424 432 HOH HOH . H 7 HOH H 32 425 435 HOH HOH . H 7 HOH H 33 426 437 HOH HOH . H 7 HOH H 34 427 438 HOH HOH . H 7 HOH H 35 428 442 HOH HOH . H 7 HOH H 36 429 443 HOH HOH . H 7 HOH H 37 430 444 HOH HOH . H 7 HOH H 38 431 445 HOH HOH . H 7 HOH H 39 432 446 HOH HOH . H 7 HOH H 40 433 447 HOH HOH . H 7 HOH H 41 434 450 HOH HOH . H 7 HOH H 42 435 451 HOH HOH . H 7 HOH H 43 436 453 HOH HOH . H 7 HOH H 44 437 455 HOH HOH . H 7 HOH H 45 438 456 HOH HOH . H 7 HOH H 46 439 458 HOH HOH . H 7 HOH H 47 440 461 HOH HOH . H 7 HOH H 48 441 467 HOH HOH . H 7 HOH H 49 442 471 HOH HOH . H 7 HOH H 50 443 473 HOH HOH . H 7 HOH H 51 444 476 HOH HOH . H 7 HOH H 52 445 477 HOH HOH . H 7 HOH H 53 446 479 HOH HOH . H 7 HOH H 54 447 481 HOH HOH . H 7 HOH H 55 448 483 HOH HOH . H 7 HOH H 56 449 486 HOH HOH . H 7 HOH H 57 450 488 HOH HOH . H 7 HOH H 58 451 489 HOH HOH . H 7 HOH H 59 452 490 HOH HOH . H 7 HOH H 60 453 491 HOH HOH . H 7 HOH H 61 454 494 HOH HOH . H 7 HOH H 62 455 495 HOH HOH . H 7 HOH H 63 456 496 HOH HOH . H 7 HOH H 64 457 498 HOH HOH . H 7 HOH H 65 458 500 HOH HOH . H 7 HOH H 66 459 503 HOH HOH . H 7 HOH H 67 460 504 HOH HOH . H 7 HOH H 68 461 507 HOH HOH . H 7 HOH H 69 462 515 HOH HOH . H 7 HOH H 70 463 518 HOH HOH . H 7 HOH H 71 464 527 HOH HOH . H 7 HOH H 72 465 530 HOH HOH . H 7 HOH H 73 466 542 HOH HOH . H 7 HOH H 74 467 547 HOH HOH . H 7 HOH H 75 468 551 HOH HOH . H 7 HOH H 76 469 553 HOH HOH . H 7 HOH H 77 470 557 HOH HOH . H 7 HOH H 78 471 561 HOH HOH . H 7 HOH H 79 472 568 HOH HOH . H 7 HOH H 80 473 577 HOH HOH . H 7 HOH H 81 474 609 HOH HOH . H 7 HOH H 82 475 619 HOH HOH . H 7 HOH H 83 476 620 HOH HOH . H 7 HOH H 84 477 667 HOH HOH . H 7 HOH H 85 478 674 HOH HOH . H 7 HOH H 86 479 747 HOH HOH . H 7 HOH H 87 480 766 HOH HOH . H 7 HOH H 88 481 897 HOH HOH . H 7 HOH H 89 482 1040 HOH HOH . H 7 HOH H 90 483 1123 HOH HOH . H 7 HOH H 91 484 1162 HOH HOH . H 7 HOH H 92 485 1210 HOH HOH . H 7 HOH H 93 486 1222 HOH HOH . H 7 HOH H 94 487 1248 HOH HOH . H 7 HOH H 95 488 1344 HOH HOH . H 7 HOH H 96 489 1350 HOH HOH . H 7 HOH H 97 490 1367 HOH HOH . H 7 HOH H 98 491 1406 HOH HOH . H 7 HOH H 99 492 1446 HOH HOH . H 7 HOH H 100 493 1462 HOH HOH . H 7 HOH H 101 494 1470 HOH HOH . H 7 HOH H 102 495 1475 HOH HOH . H 7 HOH H 103 496 1493 HOH HOH . H 7 HOH H 104 497 1501 HOH HOH . H 7 HOH H 105 498 1502 HOH HOH . H 7 HOH H 106 499 1533 HOH HOH . H 7 HOH H 107 500 1553 HOH HOH . H 7 HOH H 108 501 1562 HOH HOH . I 7 HOH I 1 520 520 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 5 _atom_site.Cartn_x 3.22 _atom_site.Cartn_y 19.625 _atom_site.Cartn_z 33.396 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 45.75 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 392 _atom_site.auth_asym_id H _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 524 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #