data_1O5W
#
_model_server_result.job_id            LD-AGcQ1LmI47cwqPvbKVA 
_model_server_result.datetime_utc      '2024-11-09 02:12:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1o5w 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":3652}' 
#
_entry.id    1O5W 
#
_exptl.entry_id    1O5W 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1O5W 
_cell.length_a            157.56 
_cell.length_b            157.56 
_cell.length_c            257.84 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1O5W 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H 1 1 
C,D,I,J,K,L 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
? 2 I N N 
? 2 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 414 A CYS 406 1_555 E C8M FAD . A FAD 652 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.776 ? 
covale ? covale2 E N5 FAD . A FAD 652 1_555 F C16 MLG . A MLG 709 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.541 ? 
covale ? covale3 B SG CYS 414 B CYS 1406 1_555 G C8M FAD . B FAD 1652 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.777 ? 
covale ? covale4 G N5 FAD . B FAD 1652 1_555 H C16 MLG . B MLG 1709 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.526 ? 
covale ? covale5 C SG CYS 414 C CYS 2406 1_555 I C8M FAD . C FAD 2652 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.734 ? 
covale ? covale6 I N5 FAD . C FAD 2652 1_555 J C16 MLG . C MLG 2709 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.531 ? 
covale ? covale7 D SG CYS 414 D CYS 3406 1_555 K C8M FAD . D FAD 3652 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.767 ? 
covale ? covale8 K N5 FAD . D FAD 3652 1_555 L C16 MLG . D MLG 3709 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.528 ? 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     1O5W 
_atom_sites.fract_transf_matrix[1][1]    0.006347 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006347 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003878 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 FAD A 1 652 652 FAD FAD . 
F 3 MLG A 1 709 709 MLG MLG . 
G 2 FAD B 1 1652 1652 FAD FAD . 
H 3 MLG B 1 1709 1709 MLG MLG . 
I 2 FAD C 1 2652 2652 FAD FAD . 
J 3 MLG C 1 2709 2709 MLG MLG . 
K 2 FAD D 1 3652 3652 FAD FAD . 
L 3 MLG D 1 3709 3709 MLG MLG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . K 2 57.66 58.084 181.989 1 56.37 ? PA FAD 3652 D 1 
HETATM 2 O O1A FAD . . . K 2 57.369 59.279 181.147 1 56.33 ? O1A FAD 3652 D 1 
HETATM 3 O O2A FAD . . . K 2 58.096 58.348 183.396 1 79.17 ? O2A FAD 3652 D 1 
HETATM 4 O O5B FAD . . . K 2 58.839 57.325 181.299 1 64.31 ? O5B FAD 3652 D 1 
HETATM 5 C C5B FAD . . . K 2 58.872 56.869 179.956 1 71.63 ? C5B FAD 3652 D 1 
HETATM 6 C C4B FAD . . . K 2 60.335 56.562 179.711 1 35.45 ? C4B FAD 3652 D 1 
HETATM 7 O O4B FAD . . . K 2 60.55 56.076 178.356 1 72.96 ? O4B FAD 3652 D 1 
HETATM 8 C C3B FAD . . . K 2 61.269 57.798 179.839 1 82.83 ? C3B FAD 3652 D 1 
HETATM 9 O O3B FAD . . . K 2 62.431 57.496 180.644 1 74.29 ? O3B FAD 3652 D 1 
HETATM 10 C C2B FAD . . . K 2 61.506 58.17 178.44 1 56.23 ? C2B FAD 3652 D 1 
HETATM 11 O O2B FAD . . . K 2 62.601 58.954 178.094 1 82.72 ? O2B FAD 3652 D 1 
HETATM 12 C C1B FAD . . . K 2 61.551 56.84 177.675 1 61.47 ? C1B FAD 3652 D 1 
HETATM 13 N N9A FAD . . . K 2 61.216 56.852 176.278 1 85.27 ? N9A FAD 3652 D 1 
HETATM 14 C C8A FAD . . . K 2 60.28 57.633 175.544 1 93.93 ? C8A FAD 3652 D 1 
HETATM 15 N N7A FAD . . . K 2 60.225 57.39 174.269 1 87.05 ? N7A FAD 3652 D 1 
HETATM 16 C C5A FAD . . . K 2 61.163 56.389 174.08 1 85.96 ? C5A FAD 3652 D 1 
HETATM 17 C C6A FAD . . . K 2 61.595 55.677 172.951 1 91.64 ? C6A FAD 3652 D 1 
HETATM 18 N N6A FAD . . . K 2 61.062 55.91 171.753 1 123.14 ? N6A FAD 3652 D 1 
HETATM 19 N N1A FAD . . . K 2 62.587 54.719 173.083 1 45.18 ? N1A FAD 3652 D 1 
HETATM 20 C C2A FAD . . . K 2 63.133 54.457 174.306 1 148.01 ? C2A FAD 3652 D 1 
HETATM 21 N N3A FAD . . . K 2 62.743 55.11 175.499 1 57.05 ? N3A FAD 3652 D 1 
HETATM 22 C C4A FAD . . . K 2 61.73 56.081 175.23 1 90.75 ? C4A FAD 3652 D 1 
HETATM 23 N N1 FAD . . . K 2 52.974 61.639 189.907 1 84.92 ? N1 FAD 3652 D 1 
HETATM 24 C C2 FAD . . . K 2 52.716 61.297 191.227 1 111.11 ? C2 FAD 3652 D 1 
HETATM 25 O O2 FAD . . . K 2 52.352 60.163 191.585 1 115.35 ? O2 FAD 3652 D 1 
HETATM 26 N N3 FAD . . . K 2 52.907 62.273 192.185 1 102.38 ? N3 FAD 3652 D 1 
HETATM 27 C C4 FAD . . . K 2 53.319 63.595 191.933 1 62.08 ? C4 FAD 3652 D 1 
HETATM 28 O O4 FAD . . . K 2 53.481 64.402 192.892 1 83.99 ? O4 FAD 3652 D 1 
HETATM 29 C C4X FAD . . . K 2 53.542 63.929 190.611 1 63.01 ? C4X FAD 3652 D 1 
HETATM 30 N N5 FAD . . . K 2 53.96 65.285 190.333 1 91.19 ? N5 FAD 3652 D 1 
HETATM 31 C C5X FAD . . . K 2 54.358 65.58 188.995 1 45.19 ? C5X FAD 3652 D 1 
HETATM 32 C C6 FAD . . . K 2 54.929 66.841 188.684 1 119.5 ? C6 FAD 3652 D 1 
HETATM 33 C C7 FAD . . . K 2 55.532 67.147 187.454 1 77.34 ? C7 FAD 3652 D 1 
HETATM 34 C C7M FAD . . . K 2 56.179 68.518 187.23 1 77.61 ? C7M FAD 3652 D 1 
HETATM 35 C C8 FAD . . . K 2 55.579 66.105 186.491 1 64.08 ? C8 FAD 3652 D 1 
HETATM 36 C C8M FAD . . . K 2 56.357 66.282 185.239 1 63.99 ? C8M FAD 3652 D 1 
HETATM 37 C C9 FAD . . . K 2 54.978 64.86 186.683 1 51.84 ? C9 FAD 3652 D 1 
HETATM 38 C C9A FAD . . . K 2 54.324 64.569 187.909 1 74.8 ? C9A FAD 3652 D 1 
HETATM 39 N N10 FAD . . . K 2 53.759 63.245 188.304 1 40.7 ? N10 FAD 3652 D 1 
HETATM 40 C C10 FAD . . . K 2 53.395 62.929 189.604 1 52.96 ? C10 FAD 3652 D 1 
HETATM 41 C C1' FAD . . . K 2 53.643 62.265 187.26 1 97.18 ? C1' FAD 3652 D 1 
HETATM 42 C C2' FAD . . . K 2 54.611 61.12 187.171 1 65.23 ? C2' FAD 3652 D 1 
HETATM 43 O O2' FAD . . . K 2 55.915 61.742 187.011 1 81.07 ? O2' FAD 3652 D 1 
HETATM 44 C C3' FAD . . . K 2 54.411 60.242 185.98 1 82.1 ? C3' FAD 3652 D 1 
HETATM 45 O O3' FAD . . . K 2 53.074 59.784 185.924 1 75.29 ? O3' FAD 3652 D 1 
HETATM 46 C C4' FAD . . . K 2 55.246 58.979 185.881 1 44.89 ? C4' FAD 3652 D 1 
HETATM 47 O O4' FAD . . . K 2 56.655 59.339 185.946 1 103.38 ? O4' FAD 3652 D 1 
HETATM 48 C C5' FAD . . . K 2 55.058 58.246 184.623 1 60.79 ? C5' FAD 3652 D 1 
HETATM 49 O O5' FAD . . . K 2 55.898 57.1 184.569 1 95.72 ? O5' FAD 3652 D 1 
HETATM 50 P P FAD . . . K 2 55.921 56.192 183.314 1 51.5 ? P FAD 3652 D 1 
HETATM 51 O O1P FAD . . . K 2 56.922 55.161 183.582 1 110.89 ? O1P FAD 3652 D 1 
HETATM 52 O O2P FAD . . . K 2 54.543 55.733 183.001 1 129.54 ? O2P FAD 3652 D 1 
HETATM 53 O O3P FAD . . . K 2 56.375 57.198 182.15 1 49.96 ? O3P FAD 3652 D 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    29 
_model_server_stats.query_time_ms           295 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           53 
#